RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 CENPUQ71F23 418 aa16.44■□□□□ 0.22
RTN3-205ENST00000356000 ANKMY2Q8IV38 441 aa16.44■□□□□ 0.22
RTN3-205ENST00000356000 RHOT2Q8IXI1 618 aa16.44■□□□□ 0.22
RTN3-205ENST00000356000 RAB3IL1Q8TBN0 382 aa16.44■□□□□ 0.22
RTN3-205ENST00000356000 LARP4BQ92615 738 aaKnown RBP16.44■□□□□ 0.22
RTN3-205ENST00000356000 SIX2Q9NPC8 291 aa16.44■□□□□ 0.22
RTN3-205ENST00000356000 OLFML3Q9NRN5 406 aa16.44■□□□□ 0.22
RTN3-205ENST00000356000 IVNS1ABPQ9Y6Y0 642 aa16.44■□□□□ 0.22
RTN3-205ENST00000356000 ITIH5Q86UX2 942 aa16.43■□□□□ 0.22
RTN3-205ENST00000356000 DGKHQ86XP1 1220 aa16.43■□□□□ 0.22
RTN3-205ENST00000356000 CEP295NLQ96MC4 621 aa16.43■□□□□ 0.22
RTN3-205ENST00000356000 OLFM1Q99784 485 aa16.43■□□□□ 0.22
RTN3-205ENST00000356000 SH3GLB2Q9NR46 395 aa16.43■□□□□ 0.22
RTN3-205ENST00000356000 BAZ2BQ9UIF8 2168 aaKnown RBP16.43■□□□□ 0.22
RTN3-205ENST00000356000 SOX13Q9UN79 622 aa16.43■□□□□ 0.22
RTN3-205ENST00000356000 LOC105371267A0A1B0GV96 52 aa16.43■□□□□ 0.22
RTN3-205ENST00000356000 ANKRD62A6NC57 917 aa16.43■□□□□ 0.22
RTN3-205ENST00000356000 POC1B-GALNT4F8VUJ3 575 aa16.43■□□□□ 0.22
RTN3-205ENST00000356000 CHRNB1P11230 501 aa16.43■□□□□ 0.22
RTN3-205ENST00000356000 ATF2P15336 505 aa16.43■□□□□ 0.22
RTN3-205ENST00000356000 PRKD1Q15139 912 aaPredicted RBP16.43■□□□□ 0.22
RTN3-205ENST00000356000 RABGAP1LQ5R372 815 aa16.43■□□□□ 0.22
RTN3-205ENST00000356000 TRIML2Q8N7C3 387 aa16.43■□□□□ 0.22
RTN3-205ENST00000356000 TTC13Q8NBP0 860 aa16.43■□□□□ 0.22
RTN3-205ENST00000356000 TSPAN14Q8NG11 270 aa16.43■□□□□ 0.22
RTN3-205ENST00000356000 OR7G1Q8NGA0 311 aa16.43■□□□□ 0.22
RTN3-205ENST00000356000 SYT11Q9BT88 431 aa16.43■□□□□ 0.22
RTN3-205ENST00000356000 WNT8AQ9H1J5 351 aa16.43■□□□□ 0.22
RTN3-205ENST00000356000 CCDC68Q9H2F9 335 aa16.43■□□□□ 0.22
RTN3-205ENST00000356000 SIAEQ9HAT2 523 aa16.43■□□□□ 0.22
RTN3-205ENST00000356000 HERC5Q9UII4 1024 aaKnown RBP16.43■□□□□ 0.22
RTN3-205ENST00000356000 HDAC9Q9UKV0 1011 aa16.43■□□□□ 0.22
RTN3-205ENST00000356000 PCDHA6Q9UN73 950 aa16.43■□□□□ 0.22
RTN3-205ENST00000356000 PCDHA8Q9Y5H6 950 aa16.43■□□□□ 0.22
RTN3-205ENST00000356000 GSTTP1A0A1W2PQM5 241 aa16.42■□□□□ 0.22
RTN3-205ENST00000356000 ARHGAP42A6NI28 874 aa16.42■□□□□ 0.22
RTN3-205ENST00000356000 KMOO15229 486 aa16.42■□□□□ 0.22
RTN3-205ENST00000356000 PHKG2P15735 406 aa16.42■□□□□ 0.22
RTN3-205ENST00000356000 MAGEA4P43358 317 aa16.42■□□□□ 0.22
RTN3-205ENST00000356000 TBCCQ15814 346 aa16.42■□□□□ 0.22
RTN3-205ENST00000356000 CYP4F22Q6NT55 531 aa16.42■□□□□ 0.22
RTN3-205ENST00000356000 GALNT4Q8N4A0 578 aa16.42■□□□□ 0.22
RTN3-205ENST00000356000 RABGEF1Q9UJ41 708 aa16.42■□□□□ 0.22
RTN3-205ENST00000356000 LOC102724428A0A0B4J2F2 783 aa16.42■□□□□ 0.22
RTN3-205ENST00000356000 ZNF701M0R085 212 aaPredicted RBP16.42■□□□□ 0.22
RTN3-205ENST00000356000 TM9SF1O15321 606 aa16.42■□□□□ 0.22
RTN3-205ENST00000356000 KRT4P19013 534 aa16.42■□□□□ 0.22
RTN3-205ENST00000356000 SIK1P57059 783 aa16.42■□□□□ 0.22
RTN3-205ENST00000356000 CYP2A13Q16696 494 aa16.42■□□□□ 0.22
RTN3-205ENST00000356000 MDH1BQ5I0G3 518 aa16.42■□□□□ 0.22
RTN3-205ENST00000356000 ANKS1BQ7Z6G8 1248 aa16.42■□□□□ 0.22
RTN3-205ENST00000356000 MCF2L2Q86YR7 1114 aa16.42■□□□□ 0.22
RTN3-205ENST00000356000 NLGN1Q8N2Q7 840 aa16.42■□□□□ 0.22
RTN3-205ENST00000356000 DCAF5Q96JK2 942 aa16.42■□□□□ 0.22
RTN3-205ENST00000356000 CSRNP1Q96S65 589 aa16.42■□□□□ 0.22
RTN3-205ENST00000356000 CCDC106Q9BWC9 280 aa16.42■□□□□ 0.22
RTN3-205ENST00000356000 RTFDC1Q9BY42 306 aaPredicted RBP16.42■□□□□ 0.22
RTN3-205ENST00000356000 SLC2A11Q9BYW1 496 aa16.42■□□□□ 0.22
RTN3-205ENST00000356000 NUF2Q9BZD4 464 aa16.42■□□□□ 0.22
RTN3-205ENST00000356000 IFT52Q9Y366 437 aa16.42■□□□□ 0.22
RTN3-205ENST00000356000 EMSYQ7Z589 1322 aa16.41■□□□□ 0.22
RTN3-205ENST00000356000 TJP1Q07157 1748 aa16.41■□□□□ 0.22
RTN3-205ENST00000356000 NAT2P11245 290 aa16.41■□□□□ 0.22
RTN3-205ENST00000356000 UBL4AP11441 157 aa16.41■□□□□ 0.22
RTN3-205ENST00000356000 STAT1P42224 750 aa16.41■□□□□ 0.22
RTN3-205ENST00000356000 TECP42680 631 aa16.41■□□□□ 0.22
RTN3-205ENST00000356000 EPHA7Q15375 998 aa16.41■□□□□ 0.22
RTN3-205ENST00000356000 OASLQ15646 514 aaKnown RBP16.41■□□□□ 0.22
RTN3-205ENST00000356000 RGS21Q2M5E4 152 aa16.41■□□□□ 0.22
RTN3-205ENST00000356000 WDR45BQ5MNZ6 344 aa16.41■□□□□ 0.22
RTN3-205ENST00000356000 PGM2L1Q6PCE3 622 aa16.41■□□□□ 0.22
RTN3-205ENST00000356000 GPR180Q86V85 440 aa16.41■□□□□ 0.22
RTN3-205ENST00000356000 RTKN2Q8IZC4 609 aa16.41■□□□□ 0.22
RTN3-205ENST00000356000 LARGE2Q8N3Y3 721 aa16.41■□□□□ 0.22
RTN3-205ENST00000356000 CPSF7Q8N684 471 aaKnown RBP16.41■□□□□ 0.22
RTN3-205ENST00000356000 SPERTQ8NA61 448 aa16.41■□□□□ 0.22
RTN3-205ENST00000356000 TBC1D15Q8TC07 691 aa16.41■□□□□ 0.22
RTN3-205ENST00000356000 CD101Q93033 1021 aa16.41■□□□□ 0.22
RTN3-205ENST00000356000 CCDC138Q96M89 665 aa16.41■□□□□ 0.22
RTN3-205ENST00000356000 PNMA5Q96PV4 448 aa16.41■□□□□ 0.22
RTN3-205ENST00000356000 VPS45Q9NRW7 570 aa16.41■□□□□ 0.22
RTN3-205ENST00000356000 KCNK4Q9NYG8 393 aa16.41■□□□□ 0.22
RTN3-205ENST00000356000 C6orf203Q9P0P8 240 aaPredicted RBP16.41■□□□□ 0.22
RTN3-205ENST00000356000 VPS51Q9UID3 782 aa16.41■□□□□ 0.22
RTN3-205ENST00000356000 FAM237BA0A1B0GVD1 139 aa16.41■□□□□ 0.22
RTN3-205ENST00000356000 KRBA1A5PL33 1030 aa16.41■□□□□ 0.22
RTN3-205ENST00000356000 FOXD2O60548 495 aaPredicted RBP16.41■□□□□ 0.22
RTN3-205ENST00000356000 GPC3P51654 580 aa16.41■□□□□ 0.22
RTN3-205ENST00000356000 COASYQ13057 564 aa16.41■□□□□ 0.22
RTN3-205ENST00000356000 TCEAL1Q15170 157 aa16.41■□□□□ 0.22
RTN3-205ENST00000356000 C1orf54Q8WWF1 131 aa16.41■□□□□ 0.22
RTN3-205ENST00000356000 DCLK3Q9C098 648 aa16.41■□□□□ 0.22
RTN3-205ENST00000356000 PPARGC1AQ9UBK2 798 aaKnown RBP16.41■□□□□ 0.22
RTN3-205ENST00000356000 SCINQ9Y6U3 715 aa16.41■□□□□ 0.22
RTN3-205ENST00000356000 ALOX15BO15296 676 aa16.4■□□□□ 0.22
RTN3-205ENST00000356000 RSL1D1O76021 490 aaKnown RBP16.4■□□□□ 0.22
RTN3-205ENST00000356000 FARP2O94887 1054 aaPredicted RBP16.4■□□□□ 0.22
RTN3-205ENST00000356000 COMTP21964 271 aa16.4■□□□□ 0.22
RTN3-205ENST00000356000 ADCY8P40145 1251 aa16.4■□□□□ 0.22
RTN3-205ENST00000356000 HNRNPFP52597 415 aaKnown RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms