RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 ABCD1P33897 745 aa7.59□□□□□ -1.19
VPS13A-201ENST00000355766 AFMP43652 599 aa7.59□□□□□ -1.19
VPS13A-201ENST00000355766 CLCN7P51798 805 aa7.59□□□□□ -1.19
VPS13A-201ENST00000355766 ZNF75DP51815 510 aa7.59□□□□□ -1.19
VPS13A-201ENST00000355766 GSDMDP57764 484 aa7.59□□□□□ -1.19
VPS13A-201ENST00000355766 IGBP1P78318 339 aa7.59□□□□□ -1.19
VPS13A-201ENST00000355766 LRRC63Q05C16 580 aa7.59□□□□□ -1.19
VPS13A-201ENST00000355766 SLBPQ14493 270 aaKnown RBP eCLIP7.59□□□□□ -1.19
VPS13A-201ENST00000355766 SMC1AQ14683 1233 aaKnown RBP7.59□□□□□ -1.19
VPS13A-201ENST00000355766 EPHA7Q15375 998 aa7.59□□□□□ -1.19
VPS13A-201ENST00000355766 RARS2Q5T160 578 aaKnown RBP7.59□□□□□ -1.19
VPS13A-201ENST00000355766 CDKAL1Q5VV42 579 aa7.59□□□□□ -1.19
VPS13A-201ENST00000355766 ZNF746Q6NUN9 644 aaPredicted RBP7.59□□□□□ -1.19
VPS13A-201ENST00000355766 FAM43BQ6ZT52 329 aaPredicted RBP7.59□□□□□ -1.19
VPS13A-201ENST00000355766 GUF1Q8N442 669 aaKnown RBP7.59□□□□□ -1.19
VPS13A-201ENST00000355766 SYT2Q8N9I0 419 aaPredicted RBP7.59□□□□□ -1.19
VPS13A-201ENST00000355766 ANKRD20A12PQ8NF67 263 aa7.59□□□□□ -1.19
VPS13A-201ENST00000355766 ZBTB10Q96DT7 871 aa7.59□□□□□ -1.19
VPS13A-201ENST00000355766 PLPPR2Q96GM1 343 aa7.59□□□□□ -1.19
VPS13A-201ENST00000355766 AGO4Q9HCK5 861 aaKnown RBP7.59□□□□□ -1.19
VPS13A-201ENST00000355766 KCNH7Q9NS40 1196 aa7.59□□□□□ -1.19
VPS13A-201ENST00000355766 C1orf112Q9NSG2 853 aa7.59□□□□□ -1.19
VPS13A-201ENST00000355766 ERAP1Q9NZ08 941 aa7.59□□□□□ -1.19
VPS13A-201ENST00000355766 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.59□□□□□ -1.19
VPS13A-201ENST00000355766 FAM8A1Q9UBU6 413 aa7.59□□□□□ -1.19
VPS13A-201ENST00000355766 SEL1LQ9UBV2 794 aa7.59□□□□□ -1.19
VPS13A-201ENST00000355766 DNM3Q9UQ16 869 aa7.59□□□□□ -1.19
VPS13A-201ENST00000355766 MAPK8IP1Q9UQF2 711 aa7.59□□□□□ -1.19
VPS13A-201ENST00000355766 OTOGLQ3ZCN5 2332 aa7.59□□□□□ -1.19
VPS13A-201ENST00000355766 TPRP12270 2363 aaKnown RBP7.59□□□□□ -1.2
VPS13A-201ENST00000355766 DENND4AQ7Z401 1863 aa7.58□□□□□ -1.2
VPS13A-201ENST00000355766 BAHCC1Q9P281 2608 aa7.58□□□□□ -1.2
VPS13A-201ENST00000355766 RRN3P2A6NIE6 340 aa7.58□□□□□ -1.2
VPS13A-201ENST00000355766 C9IYK1 514 aa7.58□□□□□ -1.2
VPS13A-201ENST00000355766 CLASP2O75122 1294 aaKnown RBP7.58□□□□□ -1.2
VPS13A-201ENST00000355766 FGFR1OPO95684 399 aaKnown RBP7.58□□□□□ -1.2
VPS13A-201ENST00000355766 PLA2G4BP0C869 781 aa7.58□□□□□ -1.2
VPS13A-201ENST00000355766 SP9P0CG40 484 aa7.58□□□□□ -1.2
VPS13A-201ENST00000355766 FGFR1P11362 822 aa7.58□□□□□ -1.2
VPS13A-201ENST00000355766 GUCY2CP25092 1073 aa7.58□□□□□ -1.2
VPS13A-201ENST00000355766 EEF1GP26641 437 aaKnown RBP7.58□□□□□ -1.2
VPS13A-201ENST00000355766 CDC25AP30304 524 aa7.58□□□□□ -1.2
VPS13A-201ENST00000355766 PBX3P40426 434 aa7.58□□□□□ -1.2
VPS13A-201ENST00000355766 ATXN1P54253 815 aaKnown RBP7.58□□□□□ -1.2
VPS13A-201ENST00000355766 SLC12A3P55017 1021 aa7.58□□□□□ -1.2
VPS13A-201ENST00000355766 ASIC1P78348 528 aa7.58□□□□□ -1.2
VPS13A-201ENST00000355766 TMEM62Q0P6H9 643 aa7.58□□□□□ -1.2
VPS13A-201ENST00000355766 ALCAMQ13740 583 aa7.58□□□□□ -1.2
VPS13A-201ENST00000355766 ATAT1Q5SQI0 421 aa7.58□□□□□ -1.2
VPS13A-201ENST00000355766 FAM102BQ5T8I3 360 aa7.58□□□□□ -1.2
VPS13A-201ENST00000355766 KCNT2Q6UVM3 1135 aa7.58□□□□□ -1.2
VPS13A-201ENST00000355766 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.58□□□□□ -1.2
VPS13A-201ENST00000355766 CCDC149Q6ZUS6 474 aa7.58□□□□□ -1.2
VPS13A-201ENST00000355766 ZSCAN30Q86W11 494 aa7.58□□□□□ -1.2
VPS13A-201ENST00000355766 ZSWIM9Q86XI8 627 aa7.58□□□□□ -1.2
VPS13A-201ENST00000355766 CATSPER3Q86XQ3 398 aa7.58□□□□□ -1.2
VPS13A-201ENST00000355766 FAM114A1Q8IWE2 563 aa7.58□□□□□ -1.2
VPS13A-201ENST00000355766 CCDC65Q8IXS2 484 aa7.58□□□□□ -1.2
VPS13A-201ENST00000355766 LRRC43Q8N309 656 aa7.58□□□□□ -1.2
VPS13A-201ENST00000355766 MRPL43Q8N983 215 aaKnown RBP7.58□□□□□ -1.2
VPS13A-201ENST00000355766 SUMF1Q8NBK3 374 aa7.58□□□□□ -1.2
VPS13A-201ENST00000355766 KCNN1Q92952 543 aa7.58□□□□□ -1.2
VPS13A-201ENST00000355766 ACSF2Q96CM8 615 aaPredicted RBP7.58□□□□□ -1.2
VPS13A-201ENST00000355766 IQCDQ96DY2 449 aa7.58□□□□□ -1.2
VPS13A-201ENST00000355766 ZNF558Q96NG5 402 aa7.58□□□□□ -1.2
VPS13A-201ENST00000355766 EIF2AK1Q9BQI3 630 aaKnown RBP7.58□□□□□ -1.2
VPS13A-201ENST00000355766 CELF4Q9BZC1 486 aaKnown RBP7.58□□□□□ -1.2
VPS13A-201ENST00000355766 FOXQ1Q9C009 403 aa7.58□□□□□ -1.2
VPS13A-201ENST00000355766 TRIM5Q9C035 493 aa7.58□□□□□ -1.2
VPS13A-201ENST00000355766 HSD3B7Q9H2F3 369 aa7.58□□□□□ -1.2
VPS13A-201ENST00000355766 THAP9Q9H5L6 903 aa7.58□□□□□ -1.2
VPS13A-201ENST00000355766 ZSWIM4Q9H7M6 989 aa7.58□□□□□ -1.2
VPS13A-201ENST00000355766 OLFML3Q9NRN5 406 aa7.58□□□□□ -1.2
VPS13A-201ENST00000355766 RGS18Q9NS28 235 aa7.58□□□□□ -1.2
VPS13A-201ENST00000355766 TMEM161AQ9NX61 479 aa7.58□□□□□ -1.2
VPS13A-201ENST00000355766 ODF2LQ9ULJ1 636 aa7.58□□□□□ -1.2
VPS13A-201ENST00000355766 CTNND2Q9UQB3 1225 aa7.58□□□□□ -1.2
VPS13A-201ENST00000355766 NFE2L3Q9Y4A8 694 aa7.58□□□□□ -1.2
VPS13A-201ENST00000355766 DENND3A2RUS2 1198 aa7.57□□□□□ -1.2
VPS13A-201ENST00000355766 ZNF503-AS2A6NEH8 195 aa7.57□□□□□ -1.2
VPS13A-201ENST00000355766 LRRC10BA6NIK2 292 aa7.57□□□□□ -1.2
VPS13A-201ENST00000355766 DBX1A6NMT0 343 aa7.57□□□□□ -1.2
VPS13A-201ENST00000355766 NARSO43776 548 aaKnown RBP7.57□□□□□ -1.2
VPS13A-201ENST00000355766 NRDCO43847 1150 aa7.57□□□□□ -1.2
VPS13A-201ENST00000355766 P4HBP07237 508 aaKnown RBP7.57□□□□□ -1.2
VPS13A-201ENST00000355766 ADRB1P08588 477 aa7.57□□□□□ -1.2
VPS13A-201ENST00000355766 INSRRP14616 1297 aa7.57□□□□□ -1.2
VPS13A-201ENST00000355766 KCNA2P16389 499 aa7.57□□□□□ -1.2
VPS13A-201ENST00000355766 ZNF131P52739 623 aa7.57□□□□□ -1.2
VPS13A-201ENST00000355766 LMNB2Q03252 620 aa7.57□□□□□ -1.2
VPS13A-201ENST00000355766 KRT17Q04695 432 aa7.57□□□□□ -1.2
VPS13A-201ENST00000355766 MESP2Q0VG99 397 aa7.57□□□□□ -1.2
VPS13A-201ENST00000355766 NKG7Q16617 165 aa7.57□□□□□ -1.2
VPS13A-201ENST00000355766 BMT2Q1RMZ1 405 aa7.57□□□□□ -1.2
VPS13A-201ENST00000355766 NCAPH2Q6IBW4 605 aa7.57□□□□□ -1.2
VPS13A-201ENST00000355766 STXBP4Q6ZWJ1 553 aa7.57□□□□□ -1.2
VPS13A-201ENST00000355766 SLC24A5Q71RS6 500 aa7.57□□□□□ -1.2
VPS13A-201ENST00000355766 OTOP3Q7RTS5 596 aa7.57□□□□□ -1.2
VPS13A-201ENST00000355766 HDXQ7Z353 690 aa7.57□□□□□ -1.2
VPS13A-201ENST00000355766 KSR1Q8IVT5 923 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms