RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 EMID1Q96A84 441 aaPredicted RBP23.38■■□□□ 1.33
NKX2-1-201ENST00000354822 SGSM3Q96HU1 749 aa23.38■■□□□ 1.33
NKX2-1-201ENST00000354822 BARX2Q9UMQ3 279 aaPredicted RBP23.38■■□□□ 1.33
NKX2-1-201ENST00000354822 TCP11X1B4DZS4 312 aa23.37■■□□□ 1.33
NKX2-1-201ENST00000354822 RASA4BC9J798 803 aa23.37■■□□□ 1.33
NKX2-1-201ENST00000354822 RASA4O43374 803 aa23.37■■□□□ 1.33
NKX2-1-201ENST00000354822 HNRNPH1P31943 449 aaKnown RBP23.37■■□□□ 1.33
NKX2-1-201ENST00000354822 PCK1P35558 622 aa23.37■■□□□ 1.33
NKX2-1-201ENST00000354822 GPD2P43304 727 aa23.37■■□□□ 1.33
NKX2-1-201ENST00000354822 RBP5P82980 135 aa23.37■■□□□ 1.33
NKX2-1-201ENST00000354822 CHADLQ6NUI6 762 aa23.37■■□□□ 1.33
NKX2-1-201ENST00000354822 TAPT1Q6NXT6 567 aa23.37■■□□□ 1.33
NKX2-1-201ENST00000354822 SRRM1Q8IYB3 904 aaKnown RBP23.37■■□□□ 1.33
NKX2-1-201ENST00000354822 HEXIM2Q96MH2 286 aaKnown RBP23.37■■□□□ 1.33
NKX2-1-201ENST00000354822 TWNKQ96RR1 684 aa23.37■■□□□ 1.33
NKX2-1-201ENST00000354822 PLCD4Q9BRC7 762 aa23.37■■□□□ 1.33
NKX2-1-201ENST00000354822 SENP1Q9P0U3 644 aa23.37■■□□□ 1.33
NKX2-1-201ENST00000354822 TJP2Q9UDY2 1190 aa23.37■■□□□ 1.33
NKX2-1-201ENST00000354822 GSTA1P08263 222 aa23.37■■□□□ 1.33
NKX2-1-201ENST00000354822 ARF4P18085 180 aaPredicted RBP23.37■■□□□ 1.33
NKX2-1-201ENST00000354822 STX2P32856 288 aa23.37■■□□□ 1.33
NKX2-1-201ENST00000354822 SMTNL2Q2TAL5 461 aa23.37■■□□□ 1.33
NKX2-1-201ENST00000354822 SUGP1Q8IWZ8 645 aaKnown RBP23.37■■□□□ 1.33
NKX2-1-201ENST00000354822 PPIL6Q8IXY8 311 aa23.37■■□□□ 1.33
NKX2-1-201ENST00000354822 RSAD2Q8WXG1 361 aa23.37■■□□□ 1.33
NKX2-1-201ENST00000354822 PRCCQ92733 491 aaPredicted RBP23.37■■□□□ 1.33
NKX2-1-201ENST00000354822 MAGEB18Q96M61 343 aa23.37■■□□□ 1.33
NKX2-1-201ENST00000354822 FARP1Q9Y4F1 1045 aaPredicted RBP23.37■■□□□ 1.33
NKX2-1-201ENST00000354822 RBM47A0AV96 593 aaKnown RBP23.36■■□□□ 1.33
NKX2-1-201ENST00000354822 UNCXA6NJT0 531 aa23.36■■□□□ 1.33
NKX2-1-201ENST00000354822 M0QYV0 167 aa23.36■■□□□ 1.33
NKX2-1-201ENST00000354822 SLC18A1P54219 525 aa23.36■■□□□ 1.33
NKX2-1-201ENST00000354822 INCA1Q0VD86 236 aa23.36■■□□□ 1.33
NKX2-1-201ENST00000354822 ZNF792Q3KQV3 632 aa23.36■■□□□ 1.33
NKX2-1-201ENST00000354822 KCNT1Q5JUK3 1230 aa23.36■■□□□ 1.33
NKX2-1-201ENST00000354822 ILDR2Q71H61 639 aa23.36■■□□□ 1.33
NKX2-1-201ENST00000354822 GPRC5AQ8NFJ5 357 aa23.36■■□□□ 1.33
NKX2-1-201ENST00000354822 ACAP3Q96P50 834 aa23.36■■□□□ 1.33
NKX2-1-201ENST00000354822 ADPGKQ9BRR6 497 aa23.36■■□□□ 1.33
NKX2-1-201ENST00000354822 AGAP1Q9UPQ3 857 aa23.36■■□□□ 1.33
NKX2-1-201ENST00000354822 USP15Q9Y4E8 981 aaPredicted RBP23.36■■□□□ 1.33
NKX2-1-201ENST00000354822 MGAMO43451 1857 aa23.36■■□□□ 1.33
NKX2-1-201ENST00000354822 TRUB2O95900 331 aaKnown RBP23.35■■□□□ 1.33
NKX2-1-201ENST00000354822 MPP2Q14168 576 aa23.35■■□□□ 1.33
NKX2-1-201ENST00000354822 PNMA8AQ86V59 439 aaPredicted RBP23.35■■□□□ 1.33
NKX2-1-201ENST00000354822 EMC1Q8N766 993 aa23.35■■□□□ 1.33
NKX2-1-201ENST00000354822 CPB2Q96IY4 423 aa23.35■■□□□ 1.33
NKX2-1-201ENST00000354822 RSAD1Q9HA92 442 aa23.35■■□□□ 1.33
NKX2-1-201ENST00000354822 SLC24A2Q9UI40 661 aa23.35■■□□□ 1.33
NKX2-1-201ENST00000354822 USP18Q9UMW8 372 aa23.35■■□□□ 1.33
NKX2-1-201ENST00000354822 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.35■■□□□ 1.33
NKX2-1-201ENST00000354822 FAM47DPA6NHR8 397 aa23.35■■□□□ 1.33
NKX2-1-201ENST00000354822 APOC4-APOC2K7ER74 178 aa23.35■■□□□ 1.33
NKX2-1-201ENST00000354822 DNAJC8O75937 253 aaPredicted RBP23.35■■□□□ 1.33
NKX2-1-201ENST00000354822 SUN1O94901 812 aa23.35■■□□□ 1.33
NKX2-1-201ENST00000354822 APOC2P02655 101 aa23.35■■□□□ 1.33
NKX2-1-201ENST00000354822 CYP2C8P10632 490 aa23.35■■□□□ 1.33
NKX2-1-201ENST00000354822 MIPP30301 263 aa23.35■■□□□ 1.33
NKX2-1-201ENST00000354822 ZNF143P52747 638 aaPredicted RBP23.35■■□□□ 1.33
NKX2-1-201ENST00000354822 DYNLT1P63172 113 aa23.35■■□□□ 1.33
NKX2-1-201ENST00000354822 TMED2Q15363 201 aa23.35■■□□□ 1.33
NKX2-1-201ENST00000354822 STILQ15468 1287 aa23.35■■□□□ 1.33
NKX2-1-201ENST00000354822 HIF1AQ16665 826 aa23.35■■□□□ 1.33
NKX2-1-201ENST00000354822 NUGGCQ68CJ6 796 aa23.35■■□□□ 1.33
NKX2-1-201ENST00000354822 TRPM8Q7Z2W7 1104 aa23.35■■□□□ 1.33
NKX2-1-201ENST00000354822 ZBED8Q8IZ13 594 aa23.35■■□□□ 1.33
NKX2-1-201ENST00000354822 FETUBQ9UGM5 382 aa23.35■■□□□ 1.33
NKX2-1-201ENST00000354822 HMGXB4Q9UGU5 601 aa23.35■■□□□ 1.33
NKX2-1-201ENST00000354822 RASSF9O75901 435 aa23.34■■□□□ 1.33
NKX2-1-201ENST00000354822 OAS1P00973 400 aaKnown RBP23.34■■□□□ 1.33
NKX2-1-201ENST00000354822 ARL4CP56559 192 aa23.34■■□□□ 1.33
NKX2-1-201ENST00000354822 IL9RQ01113 521 aa23.34■■□□□ 1.33
NKX2-1-201ENST00000354822 PDIA2Q13087 525 aaKnown RBP23.34■■□□□ 1.33
NKX2-1-201ENST00000354822 ORC1Q13415 861 aa23.34■■□□□ 1.33
NKX2-1-201ENST00000354822 MTHFD1LQ6UB35 978 aa23.34■■□□□ 1.33
NKX2-1-201ENST00000354822 TRABD2AQ86V40 505 aa23.34■■□□□ 1.33
NKX2-1-201ENST00000354822 VPS37BQ9H9H4 285 aa23.34■■□□□ 1.33
NKX2-1-201ENST00000354822 DPP3Q9NY33 737 aa23.34■■□□□ 1.33
NKX2-1-201ENST00000354822 A0A1B0GUA9 196 aa23.34■■□□□ 1.33
NKX2-1-201ENST00000354822 CSDE1O75534 798 aaKnown RBP23.34■■□□□ 1.33
NKX2-1-201ENST00000354822 PHBP35232 272 aa23.34■■□□□ 1.33
NKX2-1-201ENST00000354822 CTCFP49711 727 aaPredicted RBP23.34■■□□□ 1.33
NKX2-1-201ENST00000354822 LCLAT1Q6UWP7 414 aa23.34■■□□□ 1.33
NKX2-1-201ENST00000354822 RFX6Q8HWS3 928 aa23.34■■□□□ 1.33
NKX2-1-201ENST00000354822 NLRP7Q8WX94 980 aa23.34■■□□□ 1.33
NKX2-1-201ENST00000354822 GRAMD1AQ96CP6 724 aa23.34■■□□□ 1.33
NKX2-1-201ENST00000354822 CNPY3Q9BT09 278 aa23.34■■□□□ 1.33
NKX2-1-201ENST00000354822 PCSK1NQ9UHG2 260 aa23.34■■□□□ 1.33
NKX2-1-201ENST00000354822 ZSWIM8A7E2V4 1837 aa23.34■■□□□ 1.33
NKX2-1-201ENST00000354822 VTNP04004 478 aa23.33■■□□□ 1.33
NKX2-1-201ENST00000354822 GCAP28676 217 aa23.33■■□□□ 1.33
NKX2-1-201ENST00000354822 XRCC4Q13426 336 aa23.33■■□□□ 1.33
NKX2-1-201ENST00000354822 FAM102AQ5T9C2 384 aaPredicted RBP23.33■■□□□ 1.33
NKX2-1-201ENST00000354822 MAMDC4Q6UXC1 1216 aa23.33■■□□□ 1.33
NKX2-1-201ENST00000354822 AFG1LQ8WV93 481 aa23.33■■□□□ 1.33
NKX2-1-201ENST00000354822 NT5C1AQ9BXI3 368 aa23.33■■□□□ 1.33
NKX2-1-201ENST00000354822 MAK16Q9BXY0 300 aaKnown RBP23.33■■□□□ 1.33
NKX2-1-201ENST00000354822 FGFR1OP2Q9NVK5 253 aa23.33■■□□□ 1.33
NKX2-1-201ENST00000354822 SAE1Q9UBE0 346 aaPredicted RBP23.33■■□□□ 1.33
NKX2-1-201ENST00000354822 SMG5Q9UPR3 1016 aaKnown RBP23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms