RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 SPATA25Q9BR10 227 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 SLC25A18Q9H1K4 315 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 GHITMQ9H3K2 345 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 BRF2Q9HAW0 419 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 EPB41L4AQ9HCS5 686 aaPredicted RBP1.87□□□□□ -2.11
BRCA1-202ENST00000354071 HEYLQ9NQ87 328 aaPredicted RBP1.87□□□□□ -2.11
BRCA1-202ENST00000354071 TMEM140Q9NV12 185 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 CALCOCO1Q9P1Z2 691 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 XPR1Q9UBH6 696 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 ADD3Q9UEY8 706 aaKnown RBP1.87□□□□□ -2.11
BRCA1-202ENST00000354071 SLC5A6Q9Y289 635 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 THSD7BQ9C0I4 1608 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 CXorf49A8MYA2 514 aaPredicted RBP1.86□□□□□ -2.11
BRCA1-202ENST00000354071 ADM5C9JUS6 153 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 H3BNC9 293 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 NRP2O60462 931 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 RPP40O75818 363 aaKnown RBP1.86□□□□□ -2.11
BRCA1-202ENST00000354071 ITGB1P05556 798 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 CLTBP09497 229 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 PNLIPP16233 465 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 DRG2P55039 364 aaKnown RBP1.86□□□□□ -2.11
BRCA1-202ENST00000354071 LILRA4P59901 499 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 AP2B1P63010 937 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 CHRNEQ04844 493 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 PRKG2Q13237 762 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 CACHD1Q5VU97 1274 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 R3HCC1LQ7Z5L2 792 aaKnown RBP1.86□□□□□ -2.11
BRCA1-202ENST00000354071 SLC44A2Q8IWA5 706 aaPredicted RBP1.86□□□□□ -2.11
BRCA1-202ENST00000354071 ZBTB8BQ8NAP8 495 aaPredicted RBP1.86□□□□□ -2.11
BRCA1-202ENST00000354071 RNF125Q96EQ8 232 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 INTS4Q96HW7 963 aaKnown RBP1.86□□□□□ -2.11
BRCA1-202ENST00000354071 MXD3Q9BW11 206 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 IMPG2Q9BZV3 1241 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 KRT84Q9NSB2 600 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 HAUS2Q9NVX0 235 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 YBX2Q9Y2T7 364 aaKnown RBP1.86□□□□□ -2.11
BRCA1-202ENST00000354071 TSPOAP1O95153 1857 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 FAM90A18PA6NE21 464 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 FAM90A16PA6NEW6 464 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 FAM90A9PA6NNJ1 464 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 FAM90A5PA8MXJ8 464 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 K7ENM7 598 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 SNAP23O00161 211 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 TMCC2O75069 709 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 CER1O95813 267 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 MLYCDO95822 493 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 PLA2G1BP04054 148 aaKnown RBP1.86□□□□□ -2.11
BRCA1-202ENST00000354071 FAM90A15PP0C7V4 464 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 FAM90A14PP0C7W9 464 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 SRGAP2BP0DMP2 458 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 NPPBP16860 134 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 RPL17P18621 184 aaKnown RBP1.86□□□□□ -2.11
BRCA1-202ENST00000354071 CD72P21854 359 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 ICAM3P32942 547 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 KIR2DL3P43628 341 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 ADAM8P78325 824 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 DLX2Q07687 328 aaPredicted RBP1.86□□□□□ -2.11
BRCA1-202ENST00000354071 TRPC3Q13507 836 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 LRP8Q14114 963 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 NOMO2Q5JPE7 1267 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 ZNF484Q5JVG2 852 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 WDR45BQ5MNZ6 344 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 MANEALQ5VSG8 457 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 CLEC17AQ6ZS10 378 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 TAS1R1Q7RTX1 841 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 ZNF605Q86T29 641 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 CNPY4Q8N129 248 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 ZBTB8AQ96BR9 441 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 C3orf49Q96BT1 292 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 NEIL1Q96FI4 390 aaPredicted RBP1.86□□□□□ -2.11
BRCA1-202ENST00000354071 ZMAT2Q96NC0 199 aaKnown RBP1.86□□□□□ -2.11
BRCA1-202ENST00000354071 NUDT16L1Q9BRJ7 211 aaKnown RBP1.86□□□□□ -2.11
BRCA1-202ENST00000354071 RTKNQ9BST9 563 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 DDX23Q9BUQ8 820 aaKnown RBP1.86□□□□□ -2.11
BRCA1-202ENST00000354071 PHF7Q9BWX1 381 aaPredicted RBP1.86□□□□□ -2.11
BRCA1-202ENST00000354071 ELAC1Q9H777 363 aaKnown RBP1.86□□□□□ -2.11
BRCA1-202ENST00000354071 PREBQ9HCU5 417 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 A1CFQ9NQ94 594 aaKnown RBP1.86□□□□□ -2.11
BRCA1-202ENST00000354071 NECTIN3Q9NQS3 549 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 HPSEQ9Y251 543 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 RNF17Q9BXT8 1623 aaKnown RBP1.86□□□□□ -2.11
BRCA1-202ENST00000354071 WDFY3Q8IZQ1 3526 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 ZNF503-AS2A6NEH8 195 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 BTBD11A6QL63 1104 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 ORC4O43929 436 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 RASAL1O95294 804 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 CSF1P09603 554 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 NCAM1P13591 858 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 XBP1P17861 261 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 SSTR4P31391 388 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 HOXD13P35453 343 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 MAPKAPK2P49137 400 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 CHRNDQ07001 517 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 RAB32Q13637 225 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 PDE1CQ14123 709 aaPredicted RBP1.86□□□□□ -2.11
BRCA1-202ENST00000354071 CCNG2Q16589 344 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 CCDC178Q5BJE1 867 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 SNX30Q5VWJ9 437 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 SPATA1Q5VX52 437 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 ATG16L1Q676U5 607 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms