RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 USP20Q9Y2K6 914 aa5.23□□□□□ -1.57
SKP1-202ENST00000353411 CDK12Q9NYV4 1490 aaPredicted RBP5.23□□□□□ -1.57
SKP1-202ENST00000353411 INO80Q9ULG1 1556 aaPredicted RBP5.23□□□□□ -1.57
SKP1-202ENST00000353411 POU5F1Q01860 360 aaKnown RBP5.23□□□□□ -1.57
SKP1-202ENST00000353411 TBC1D10BQ4KMP7 808 aaPredicted RBP5.23□□□□□ -1.57
SKP1-202ENST00000353411 C3orf62Q6ZUJ4 267 aa5.23□□□□□ -1.57
SKP1-202ENST00000353411 IKBIPQ70UQ0 350 aa5.23□□□□□ -1.57
SKP1-202ENST00000353411 CCDC60Q8IWA6 550 aaPredicted RBP5.23□□□□□ -1.57
SKP1-202ENST00000353411 FITM2Q8N6M3 262 aa5.23□□□□□ -1.57
SKP1-202ENST00000353411 KCTD6Q8NC69 237 aa5.23□□□□□ -1.57
SKP1-202ENST00000353411 IRGQQ8WZA9 623 aa5.23□□□□□ -1.57
SKP1-202ENST00000353411 MKNK1Q9BUB5 465 aa5.23□□□□□ -1.57
SKP1-202ENST00000353411 MAGEE1Q9HCI5 957 aa5.23□□□□□ -1.57
SKP1-202ENST00000353411 LNPEPQ9UIQ6 1025 aa5.23□□□□□ -1.57
SKP1-202ENST00000353411 GIT1Q9Y2X7 761 aa5.23□□□□□ -1.57
SKP1-202ENST00000353411 ZNF638Q14966 1978 aaKnown RBP5.23□□□□□ -1.57
SKP1-202ENST00000353411 FTLP02792 175 aaPredicted RBP5.23□□□□□ -1.57
SKP1-202ENST00000353411 FASP25445 335 aa5.23□□□□□ -1.57
SKP1-202ENST00000353411 BCAP31P51572 246 aa5.23□□□□□ -1.57
SKP1-202ENST00000353411 HSPA2P54652 639 aa5.23□□□□□ -1.57
SKP1-202ENST00000353411 GALCP54803 685 aa5.23□□□□□ -1.57
SKP1-202ENST00000353411 CYP4A11Q02928 519 aa5.23□□□□□ -1.57
SKP1-202ENST00000353411 PPP2R5DQ14738 602 aa5.23□□□□□ -1.57
SKP1-202ENST00000353411 C5orf22Q49AR2 442 aa5.23□□□□□ -1.57
SKP1-202ENST00000353411 CYP4A22Q5TCH4 519 aa5.23□□□□□ -1.57
SKP1-202ENST00000353411 TPTE2Q6XPS3 522 aa5.23□□□□□ -1.57
SKP1-202ENST00000353411 AMER2Q8N7J2 671 aa5.23□□□□□ -1.57
SKP1-202ENST00000353411 MIGA1Q8NAN2 632 aa5.23□□□□□ -1.57
SKP1-202ENST00000353411 PLEKHA8Q96JA3 519 aa5.23□□□□□ -1.57
SKP1-202ENST00000353411 EPB41L4AQ9HCS5 686 aaPredicted RBP5.23□□□□□ -1.57
SKP1-202ENST00000353411 NDUFB9Q9Y6M9 179 aa5.23□□□□□ -1.57
SKP1-202ENST00000353411 ARID1BQ8NFD5 2236 aaPredicted RBP5.22□□□□□ -1.57
SKP1-202ENST00000353411 FAM172BPA6NC97 362 aa5.22□□□□□ -1.57
SKP1-202ENST00000353411 LRRC10BA6NIK2 292 aa5.22□□□□□ -1.57
SKP1-202ENST00000353411 PDE2AO00408 941 aaPredicted RBP5.22□□□□□ -1.57
SKP1-202ENST00000353411 TSPAN4O14817 238 aa5.22□□□□□ -1.57
SKP1-202ENST00000353411 RGS5O15539 181 aa5.22□□□□□ -1.57
SKP1-202ENST00000353411 LGR5O75473 907 aa5.22□□□□□ -1.57
SKP1-202ENST00000353411 SEC24AO95486 1093 aa5.22□□□□□ -1.57
SKP1-202ENST00000353411 PRKACBP22694 351 aa5.22□□□□□ -1.57
SKP1-202ENST00000353411 CASP1P29466 404 aa5.22□□□□□ -1.57
SKP1-202ENST00000353411 STIP1P31948 543 aaKnown RBP5.22□□□□□ -1.57
SKP1-202ENST00000353411 SARSP49591 514 aaKnown RBP5.22□□□□□ -1.57
SKP1-202ENST00000353411 RAD23AP54725 363 aa5.22□□□□□ -1.57
SKP1-202ENST00000353411 TOP3AQ13472 1001 aaPredicted RBP5.22□□□□□ -1.57
SKP1-202ENST00000353411 ALCAMQ13740 583 aa5.22□□□□□ -1.57
SKP1-202ENST00000353411 PLS1Q14651 629 aa5.22□□□□□ -1.57
SKP1-202ENST00000353411 ARHGEF16Q5VV41 709 aa5.22□□□□□ -1.57
SKP1-202ENST00000353411 SYCE2Q6PIF2 218 aa5.22□□□□□ -1.57
SKP1-202ENST00000353411 CYB5R4Q7L1T6 521 aa5.22□□□□□ -1.57
SKP1-202ENST00000353411 ZNF572Q7Z3I7 529 aaPredicted RBP5.22□□□□□ -1.57
SKP1-202ENST00000353411 C16orf62Q7Z3J2 963 aa5.22□□□□□ -1.57
SKP1-202ENST00000353411 SLC25A41Q8N5S1 370 aa5.22□□□□□ -1.57
SKP1-202ENST00000353411 UCMAQ8WVF2 138 aa5.22□□□□□ -1.57
SKP1-202ENST00000353411 GJA10Q969M2 543 aa5.22□□□□□ -1.57
SKP1-202ENST00000353411 HNRNPABQ99729 332 aaKnown RBP5.22□□□□□ -1.57
SKP1-202ENST00000353411 UNKQ9C0B0 810 aaKnown RBP5.22□□□□□ -1.57
SKP1-202ENST00000353411 TAS2R1Q9NYW7 299 aa5.22□□□□□ -1.57
SKP1-202ENST00000353411 UBA2Q9UBT2 640 aaPredicted RBP5.22□□□□□ -1.57
SKP1-202ENST00000353411 CNOT8Q9UFF9 292 aaKnown RBP5.22□□□□□ -1.57
SKP1-202ENST00000353411 ING4Q9UNL4 249 aa5.22□□□□□ -1.57
SKP1-202ENST00000353411 BAIAP2Q9UQB8 552 aa5.22□□□□□ -1.57
SKP1-202ENST00000353411 MYO3AQ8NEV4 1616 aa5.22□□□□□ -1.57
SKP1-202ENST00000353411 CLOCKO15516 846 aa5.22□□□□□ -1.57
SKP1-202ENST00000353411 ALOX12P18054 663 aa5.22□□□□□ -1.57
SKP1-202ENST00000353411 RPA1P27694 616 aa5.22□□□□□ -1.57
SKP1-202ENST00000353411 GPD2P43304 727 aa5.22□□□□□ -1.57
SKP1-202ENST00000353411 NAMPTP43490 491 aa5.22□□□□□ -1.57
SKP1-202ENST00000353411 RHBDL3P58872 404 aa5.22□□□□□ -1.57
SKP1-202ENST00000353411 AHI1Q8N157 1196 aa5.22□□□□□ -1.57
SKP1-202ENST00000353411 CMTR1Q8N1G2 835 aaKnown RBP5.22□□□□□ -1.57
SKP1-202ENST00000353411 PNPT1Q8TCS8 783 aaKnown RBP5.22□□□□□ -1.57
SKP1-202ENST00000353411 SNX27Q96L92 541 aa5.22□□□□□ -1.57
SKP1-202ENST00000353411 AIFM3Q96NN9 605 aa5.22□□□□□ -1.57
SKP1-202ENST00000353411 S100A14Q9HCY8 104 aa5.22□□□□□ -1.57
SKP1-202ENST00000353411 FKBP14Q9NWM8 211 aa5.22□□□□□ -1.57
SKP1-202ENST00000353411 RTCBQ9Y3I0 505 aaKnown RBP5.22□□□□□ -1.57
SKP1-202ENST00000353411 MYO3BQ8WXR4 1341 aa5.22□□□□□ -1.57
SKP1-202ENST00000353411 CLTCL1P53675 1640 aa5.22□□□□□ -1.57
SKP1-202ENST00000353411 ILVBLA1L0T0 632 aa5.22□□□□□ -1.57
SKP1-202ENST00000353411 PABPC1P11940 636 aaKnown RBP5.22□□□□□ -1.57
SKP1-202ENST00000353411 ZAP70P43403 619 aa5.22□□□□□ -1.57
SKP1-202ENST00000353411 CSTF3Q12996 717 aaKnown RBP5.22□□□□□ -1.57
SKP1-202ENST00000353411 EMC10Q5UCC4 262 aa5.22□□□□□ -1.57
SKP1-202ENST00000353411 TMC4Q7Z404 712 aa5.22□□□□□ -1.57
SKP1-202ENST00000353411 TMEM139Q8IV31 216 aa5.22□□□□□ -1.57
SKP1-202ENST00000353411 RTL3Q8N8U3 475 aaKnown RBP5.22□□□□□ -1.57
SKP1-202ENST00000353411 BDH2Q9BUT1 245 aa5.22□□□□□ -1.57
SKP1-202ENST00000353411 C6orf62Q9GZU0 229 aaPredicted RBP5.22□□□□□ -1.57
SKP1-202ENST00000353411 TMEM206Q9H813 350 aa5.22□□□□□ -1.57
SKP1-202ENST00000353411 TRMT6Q9UJA5 497 aaKnown RBP5.22□□□□□ -1.57
SKP1-202ENST00000353411 TFR2Q9UP52 801 aa5.22□□□□□ -1.57
SKP1-202ENST00000353411 hCG_1642624A0A1W2PR95 340 aa5.22□□□□□ -1.57
SKP1-202ENST00000353411 ZSCAN5CA6NGD5 496 aaPredicted RBP5.22□□□□□ -1.57
SKP1-202ENST00000353411 TRPC5OSA6NMA1 111 aa5.22□□□□□ -1.57
SKP1-202ENST00000353411 ME2P23368 584 aa5.22□□□□□ -1.57
SKP1-202ENST00000353411 DNAJC24Q6P3W2 148 aa5.22□□□□□ -1.57
SKP1-202ENST00000353411 TPH2Q8IWU9 490 aa5.22□□□□□ -1.57
SKP1-202ENST00000353411 ALDH16A1Q8IZ83 802 aa5.22□□□□□ -1.57
SKP1-202ENST00000353411 NCLNQ969V3 563 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms