RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 ST13P5Q8NFI4 369 aaPredicted RBP23.51■■□□□ 1.35
SNX3-202ENST00000349379 LMO3Q8TAP4 145 aa23.51■■□□□ 1.35
SNX3-202ENST00000349379 C8orf48Q96LL4 319 aa23.51■■□□□ 1.35
SNX3-202ENST00000349379 TRPV4Q9HBA0 871 aa23.51■■□□□ 1.35
SNX3-202ENST00000349379 DACH1Q9UI36 760 aa23.51■■□□□ 1.35
SNX3-202ENST00000349379 KMT2EQ8IZD2 1858 aa23.5■■□□□ 1.35
SNX3-202ENST00000349379 MYO16Q9Y6X6 1858 aa23.5■■□□□ 1.35
SNX3-202ENST00000349379 PRR33A8MZF0 331 aa23.5■■□□□ 1.35
SNX3-202ENST00000349379 CLDN5O00501 218 aa23.5■■□□□ 1.35
SNX3-202ENST00000349379 TRIM66O15016 1216 aa23.5■■□□□ 1.35
SNX3-202ENST00000349379 NARSO43776 548 aaKnown RBP23.5■■□□□ 1.35
SNX3-202ENST00000349379 GRIK1P39086 918 aa23.5■■□□□ 1.35
SNX3-202ENST00000349379 TAF12Q16514 161 aa23.5■■□□□ 1.35
SNX3-202ENST00000349379 FAM78AQ5JUQ0 283 aa23.5■■□□□ 1.35
SNX3-202ENST00000349379 STXBP5Q5T5C0 1151 aa23.5■■□□□ 1.35
SNX3-202ENST00000349379 BMP8AQ7Z5Y6 402 aa23.5■■□□□ 1.35
SNX3-202ENST00000349379 FAM35AQ86V20 835 aa23.5■■□□□ 1.35
SNX3-202ENST00000349379 ELSPBP1Q96BH3 223 aa23.5■■□□□ 1.35
SNX3-202ENST00000349379 CNOT6LQ96LI5 555 aaKnown RBP23.5■■□□□ 1.35
SNX3-202ENST00000349379 ARID3AQ99856 593 aa23.5■■□□□ 1.35
SNX3-202ENST00000349379 LRFN3Q9BTN0 628 aa23.5■■□□□ 1.35
SNX3-202ENST00000349379 NT5C1AQ9BXI3 368 aa23.5■■□□□ 1.35
SNX3-202ENST00000349379 ATXN3LQ9H3M9 355 aa23.5■■□□□ 1.35
SNX3-202ENST00000349379 ZNF318Q5VUA4 2279 aa23.49■■□□□ 1.35
SNX3-202ENST00000349379 TMEM221A6NGB7 291 aa23.49■■□□□ 1.35
SNX3-202ENST00000349379 F8VP50 259 aa23.49■■□□□ 1.35
SNX3-202ENST00000349379 M0R296 226 aa23.49■■□□□ 1.35
SNX3-202ENST00000349379 TADA3O75528 432 aa23.49■■□□□ 1.35
SNX3-202ENST00000349379 SRFP11831 508 aa23.49■■□□□ 1.35
SNX3-202ENST00000349379 ORC1Q13415 861 aa23.49■■□□□ 1.35
SNX3-202ENST00000349379 TTC39CQ8N584 583 aa23.49■■□□□ 1.35
SNX3-202ENST00000349379 SMARCD2Q92925 531 aa23.49■■□□□ 1.35
SNX3-202ENST00000349379 SLC2A4RGQ9NR83 387 aa23.49■■□□□ 1.35
SNX3-202ENST00000349379 CISHQ9NSE2 258 aa23.49■■□□□ 1.35
SNX3-202ENST00000349379 UXTQ9UBK9 157 aaPredicted RBP23.49■■□□□ 1.35
SNX3-202ENST00000349379 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.49■■□□□ 1.35
SNX3-202ENST00000349379 AFPP02771 609 aaKnown RBP23.48■■□□□ 1.35
SNX3-202ENST00000349379 CD58P19256 250 aa23.48■■□□□ 1.35
SNX3-202ENST00000349379 WEE1P30291 646 aa23.48■■□□□ 1.35
SNX3-202ENST00000349379 CUL2Q13617 745 aa23.48■■□□□ 1.35
SNX3-202ENST00000349379 CCDC183Q5T5S1 534 aa23.48■■□□□ 1.35
SNX3-202ENST00000349379 TANGO2Q6ICL3 276 aa23.48■■□□□ 1.35
SNX3-202ENST00000349379 UBR7Q8N806 425 aa23.48■■□□□ 1.35
SNX3-202ENST00000349379 C12orf29Q8N999 325 aa23.48■■□□□ 1.35
SNX3-202ENST00000349379 ZSCAN18Q8TBC5 510 aaPredicted RBP23.48■■□□□ 1.35
SNX3-202ENST00000349379 SMARCD1Q96GM5 515 aa23.48■■□□□ 1.35
SNX3-202ENST00000349379 KXD1Q9BQD3 176 aa23.48■■□□□ 1.35
SNX3-202ENST00000349379 TTLL2Q9BWV7 592 aa23.48■■□□□ 1.35
SNX3-202ENST00000349379 PLA2G2FQ9BZM2 168 aa23.48■■□□□ 1.35
SNX3-202ENST00000349379 THAP9Q9H5L6 903 aa23.48■■□□□ 1.35
SNX3-202ENST00000349379 TASP1Q9H6P5 420 aa23.48■■□□□ 1.35
SNX3-202ENST00000349379 ZMYM5Q9UJ78 669 aa23.48■■□□□ 1.35
SNX3-202ENST00000349379 ATP8B3O60423 1300 aa23.48■■□□□ 1.35
SNX3-202ENST00000349379 TICRRQ7Z2Z1 1910 aa23.47■■□□□ 1.35
SNX3-202ENST00000349379 SOBPA7XYQ1 873 aa23.47■■□□□ 1.35
SNX3-202ENST00000349379 CCDC130P13994 396 aa23.47■■□□□ 1.35
SNX3-202ENST00000349379 ANXA13P27216 316 aa23.47■■□□□ 1.35
SNX3-202ENST00000349379 CYP4F8P98187 520 aa23.47■■□□□ 1.35
SNX3-202ENST00000349379 ARHGAP15Q53QZ3 475 aa23.47■■□□□ 1.35
SNX3-202ENST00000349379 GPR158Q5T848 1215 aa23.47■■□□□ 1.35
SNX3-202ENST00000349379 DENND5BQ6ZUT9 1274 aa23.47■■□□□ 1.35
SNX3-202ENST00000349379 GCNAQ96QF7 691 aa23.47■■□□□ 1.35
SNX3-202ENST00000349379 ZFP14Q9HCL3 533 aa23.47■■□□□ 1.35
SNX3-202ENST00000349379 MAGED2Q9UNF1 606 aaPredicted RBP23.47■■□□□ 1.35
SNX3-202ENST00000349379 NCANO14594 1321 aa23.47■■□□□ 1.35
SNX3-202ENST00000349379 DDX6P26196 483 aaKnown RBP eCLIP23.46■■□□□ 1.35
SNX3-202ENST00000349379 RAD23BP54727 409 aa23.46■■□□□ 1.35
SNX3-202ENST00000349379 USP46P62068 366 aa23.46■■□□□ 1.35
SNX3-202ENST00000349379 CETN1Q12798 172 aa23.46■■□□□ 1.35
SNX3-202ENST00000349379 HFE2Q6ZVN8 426 aa23.46■■□□□ 1.35
SNX3-202ENST00000349379 ZMIZ2Q8NF64 920 aa23.46■■□□□ 1.35
SNX3-202ENST00000349379 SLC2A14Q8TDB8 520 aa23.46■■□□□ 1.35
SNX3-202ENST00000349379 NT5C1BQ96P26 610 aa23.46■■□□□ 1.35
SNX3-202ENST00000349379 HNRNPABQ99729 332 aaKnown RBP23.46■■□□□ 1.35
SNX3-202ENST00000349379 SLITRK6Q9H5Y7 841 aa23.46■■□□□ 1.35
SNX3-202ENST00000349379 CSNK1G1Q9HCP0 422 aa23.46■■□□□ 1.35
SNX3-202ENST00000349379 TMEM63CQ9P1W3 806 aa23.46■■□□□ 1.35
SNX3-202ENST00000349379 TRIM21P19474 475 aaKnown RBP23.45■■□□□ 1.34
SNX3-202ENST00000349379 TBXAS1P24557 533 aaPredicted RBP23.45■■□□□ 1.34
SNX3-202ENST00000349379 ARID3BQ8IVW6 561 aaPredicted RBP23.45■■□□□ 1.34
SNX3-202ENST00000349379 SLC4A11Q8NBS3 891 aa23.45■■□□□ 1.34
SNX3-202ENST00000349379 EHBP1Q8NDI1 1231 aa23.45■■□□□ 1.34
SNX3-202ENST00000349379 KCNK16Q96T55 309 aa23.45■■□□□ 1.34
SNX3-202ENST00000349379 SMOQ99835 787 aa23.45■■□□□ 1.34
SNX3-202ENST00000349379 MED10Q9BTT4 135 aa23.45■■□□□ 1.34
SNX3-202ENST00000349379 SLC46A2Q9BY10 475 aa23.45■■□□□ 1.34
SNX3-202ENST00000349379 DMAP1Q9NPF5 467 aaPredicted RBP23.45■■□□□ 1.34
SNX3-202ENST00000349379 KRT82Q9NSB4 513 aa23.45■■□□□ 1.34
SNX3-202ENST00000349379 FAM49BQ9NUQ9 324 aa23.45■■□□□ 1.34
SNX3-202ENST00000349379 WNT16Q9UBV4 365 aa23.45■■□□□ 1.34
SNX3-202ENST00000349379 TNFRSF10BO14763 440 aa23.44■■□□□ 1.34
SNX3-202ENST00000349379 AP1G2O75843 785 aa23.44■■□□□ 1.34
SNX3-202ENST00000349379 GPC5P78333 572 aa23.44■■□□□ 1.34
SNX3-202ENST00000349379 LRMPQ12912 555 aa23.44■■□□□ 1.34
SNX3-202ENST00000349379 TPD52L1Q16890 204 aaPredicted RBP23.44■■□□□ 1.34
SNX3-202ENST00000349379 VITQ6UXI7 678 aa23.44■■□□□ 1.34
SNX3-202ENST00000349379 E2F7Q96AV8 911 aa23.44■■□□□ 1.34
SNX3-202ENST00000349379 RSPRY1Q96DX4 576 aa23.44■■□□□ 1.34
SNX3-202ENST00000349379 CYFIP2Q96F07 1278 aa23.44■■□□□ 1.34
SNX3-202ENST00000349379 TMEM176AQ96HP8 235 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms