RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 NQO1P15559 274 aaKnown RBP16.23■□□□□ 0.19
TNFSF13-202ENST00000349228 GBP2P32456 591 aaPredicted RBP16.23■□□□□ 0.19
TNFSF13-202ENST00000349228 NCALDP61601 193 aa16.23■□□□□ 0.19
TNFSF13-202ENST00000349228 KCTD2Q14681 263 aa16.23■□□□□ 0.19
TNFSF13-202ENST00000349228 PDK4Q16654 411 aa16.23■□□□□ 0.19
TNFSF13-202ENST00000349228 WLSQ5T9L3 541 aa16.23■□□□□ 0.19
TNFSF13-202ENST00000349228 EEPD1Q7L9B9 569 aa16.23■□□□□ 0.19
TNFSF13-202ENST00000349228 ARFGAP1Q8N6T3 406 aa16.23■□□□□ 0.19
TNFSF13-202ENST00000349228 SLC4A11Q8NBS3 891 aa16.23■□□□□ 0.19
TNFSF13-202ENST00000349228 JOSD2Q8TAC2 188 aa16.23■□□□□ 0.19
TNFSF13-202ENST00000349228 ASCC2Q9H1I8 757 aaPredicted RBP16.23■□□□□ 0.19
TNFSF13-202ENST00000349228 MLXIPLQ9NP71 852 aa16.23■□□□□ 0.19
TNFSF13-202ENST00000349228 SIX4Q9UIU6 781 aa16.23■□□□□ 0.19
TNFSF13-202ENST00000349228 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.22■□□□□ 0.19
TNFSF13-202ENST00000349228 ATP6V1G2O95670 118 aa16.22■□□□□ 0.19
TNFSF13-202ENST00000349228 STAU1O95793 577 aaKnown RBP16.22■□□□□ 0.19
TNFSF13-202ENST00000349228 FOXN2P32314 431 aa16.22■□□□□ 0.19
TNFSF13-202ENST00000349228 TFDP2Q14188 446 aa16.22■□□□□ 0.19
TNFSF13-202ENST00000349228 PKN2Q16513 984 aaKnown RBP16.22■□□□□ 0.19
TNFSF13-202ENST00000349228 PREPLQ4J6C6 727 aaPredicted RBP16.22■□□□□ 0.19
TNFSF13-202ENST00000349228 FAM47CQ5HY64 1035 aa16.22■□□□□ 0.19
TNFSF13-202ENST00000349228 EEF1DP3Q658K8 133 aa16.22■□□□□ 0.19
TNFSF13-202ENST00000349228 ERO1BQ86YB8 467 aa16.22■□□□□ 0.19
TNFSF13-202ENST00000349228 NT5DC4Q86YG4 428 aa16.22■□□□□ 0.19
TNFSF13-202ENST00000349228 PDIK1LQ8N165 341 aa16.22■□□□□ 0.19
TNFSF13-202ENST00000349228 C1orf127Q8N9H9 656 aa16.22■□□□□ 0.19
TNFSF13-202ENST00000349228 CPT1BQ92523 772 aa16.22■□□□□ 0.19
TNFSF13-202ENST00000349228 HAUS1Q96CS2 278 aa16.22■□□□□ 0.19
TNFSF13-202ENST00000349228 CPXM1Q96SM3 734 aa16.22■□□□□ 0.19
TNFSF13-202ENST00000349228 NCAPGQ9BPX3 1015 aa16.22■□□□□ 0.19
TNFSF13-202ENST00000349228 CYTH4Q9UIA0 394 aa16.22■□□□□ 0.19
TNFSF13-202ENST00000349228 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.22■□□□□ 0.19
TNFSF13-202ENST00000349228 FOXO6A8MYZ6 492 aa16.21■□□□□ 0.19
TNFSF13-202ENST00000349228 MCF2LO15068 1137 aa16.21■□□□□ 0.19
TNFSF13-202ENST00000349228 TRUB2O95900 331 aaKnown RBP16.21■□□□□ 0.19
TNFSF13-202ENST00000349228 CXCL8P10145 99 aa16.21■□□□□ 0.19
TNFSF13-202ENST00000349228 EZRP15311 586 aaKnown RBP16.21■□□□□ 0.19
TNFSF13-202ENST00000349228 IL1R2P27930 398 aa16.21■□□□□ 0.19
TNFSF13-202ENST00000349228 ALDH3A1P30838 453 aa16.21■□□□□ 0.19
TNFSF13-202ENST00000349228 RPL22P35268 128 aaKnown RBP16.21■□□□□ 0.19
TNFSF13-202ENST00000349228 TTLL4Q14679 1199 aa16.21■□□□□ 0.19
TNFSF13-202ENST00000349228 SETDB1Q15047 1291 aa16.21■□□□□ 0.19
TNFSF13-202ENST00000349228 STILQ15468 1287 aa16.21■□□□□ 0.19
TNFSF13-202ENST00000349228 SPDYAQ5MJ70 313 aa16.21■□□□□ 0.19
TNFSF13-202ENST00000349228 ADGRD1Q6QNK2 874 aa16.21■□□□□ 0.19
TNFSF13-202ENST00000349228 FBF1Q8TES7 1133 aa16.21■□□□□ 0.19
TNFSF13-202ENST00000349228 MMP19Q99542 508 aa16.21■□□□□ 0.19
TNFSF13-202ENST00000349228 FRMD8Q9BZ67 464 aaPredicted RBP16.21■□□□□ 0.19
TNFSF13-202ENST00000349228 MROH8Q9H579 483 aa16.21■□□□□ 0.19
TNFSF13-202ENST00000349228 ACSS3Q9H6R3 686 aa16.21■□□□□ 0.19
TNFSF13-202ENST00000349228 YY1AP1Q9H869 796 aa16.21■□□□□ 0.19
TNFSF13-202ENST00000349228 METTL5Q9NRN9 209 aaKnown RBP16.21■□□□□ 0.19
TNFSF13-202ENST00000349228 ERAP1Q9NZ08 941 aa16.21■□□□□ 0.19
TNFSF13-202ENST00000349228 RABGEF1Q9UJ41 708 aa16.21■□□□□ 0.19
TNFSF13-202ENST00000349228 USH1CQ9Y6N9 552 aa16.21■□□□□ 0.19
TNFSF13-202ENST00000349228 LACTBL1A8MY62 500 aa16.21■□□□□ 0.18
TNFSF13-202ENST00000349228 TYROBPO43914 113 aa16.21■□□□□ 0.18
TNFSF13-202ENST00000349228 SPAG6O75602 509 aa16.21■□□□□ 0.18
TNFSF13-202ENST00000349228 MICAL2O94851 1124 aa16.21■□□□□ 0.18
TNFSF13-202ENST00000349228 ENDOD1O94919 500 aa16.21■□□□□ 0.18
TNFSF13-202ENST00000349228 STAG3L1P0CL83 205 aa16.21■□□□□ 0.18
TNFSF13-202ENST00000349228 ZNF143P52747 638 aaPredicted RBP16.21■□□□□ 0.18
TNFSF13-202ENST00000349228 EIF3EP60228 445 aaKnown RBP16.21■□□□□ 0.18
TNFSF13-202ENST00000349228 FASTKD3Q14CZ7 662 aaKnown RBP16.21■□□□□ 0.18
TNFSF13-202ENST00000349228 ZKSCAN8Q15776 578 aaPredicted RBP16.21■□□□□ 0.18
TNFSF13-202ENST00000349228 HHATQ5VTY9 493 aa16.21■□□□□ 0.18
TNFSF13-202ENST00000349228 TRIM50Q86XT4 487 aa16.21■□□□□ 0.18
TNFSF13-202ENST00000349228 RFX6Q8HWS3 928 aa16.21■□□□□ 0.18
TNFSF13-202ENST00000349228 LRRC8CQ8TDW0 803 aa16.21■□□□□ 0.18
TNFSF13-202ENST00000349228 ACSF2Q96CM8 615 aaPredicted RBP16.21■□□□□ 0.18
TNFSF13-202ENST00000349228 KLHL29Q96CT2 875 aa16.21■□□□□ 0.18
TNFSF13-202ENST00000349228 FGD4Q96M96 766 aa16.21■□□□□ 0.18
TNFSF13-202ENST00000349228 CNPY3Q9BT09 278 aa16.21■□□□□ 0.18
TNFSF13-202ENST00000349228 DHRS4Q9BTZ2 278 aa16.21■□□□□ 0.18
TNFSF13-202ENST00000349228 MAK16Q9BXY0 300 aaKnown RBP16.21■□□□□ 0.18
TNFSF13-202ENST00000349228 CD248Q9HCU0 757 aa16.21■□□□□ 0.18
TNFSF13-202ENST00000349228 ARHGEF3Q9NR81 526 aa16.21■□□□□ 0.18
TNFSF13-202ENST00000349228 TXLNGQ9NUQ3 528 aa16.21■□□□□ 0.18
TNFSF13-202ENST00000349228 USP18Q9UMW8 372 aa16.21■□□□□ 0.18
TNFSF13-202ENST00000349228 ASB14A6NK59 587 aa16.2■□□□□ 0.18
TNFSF13-202ENST00000349228 B4GALT5O43286 388 aa16.2■□□□□ 0.18
TNFSF13-202ENST00000349228 DCTN3O75935 186 aa16.2■□□□□ 0.18
TNFSF13-202ENST00000349228 ERBB2P04626 1255 aa16.2■□□□□ 0.18
TNFSF13-202ENST00000349228 CA4P22748 312 aa16.2■□□□□ 0.18
TNFSF13-202ENST00000349228 MIPP30301 263 aa16.2■□□□□ 0.18
TNFSF13-202ENST00000349228 GPD2P43304 727 aa16.2■□□□□ 0.18
TNFSF13-202ENST00000349228 YARSP54577 528 aaKnown RBP16.2■□□□□ 0.18
TNFSF13-202ENST00000349228 GPX6P59796 221 aa16.2■□□□□ 0.18
TNFSF13-202ENST00000349228 OSTNP61366 133 aa16.2■□□□□ 0.18
TNFSF13-202ENST00000349228 CGB2Q6NT52 195 aa16.2■□□□□ 0.18
TNFSF13-202ENST00000349228 TBC1D1Q86TI0 1168 aaPredicted RBP16.2■□□□□ 0.18
TNFSF13-202ENST00000349228 VSIG1Q86XK7 387 aa16.2■□□□□ 0.18
TNFSF13-202ENST00000349228 PALM2Q8IXS6 379 aa16.2■□□□□ 0.18
TNFSF13-202ENST00000349228 FITM2Q8N6M3 262 aa16.2■□□□□ 0.18
TNFSF13-202ENST00000349228 FBXO41Q8TF61 875 aa16.2■□□□□ 0.18
TNFSF13-202ENST00000349228 DCPSQ96C86 337 aaKnown RBP16.2■□□□□ 0.18
TNFSF13-202ENST00000349228 PAIP2Q9BPZ3 127 aaKnown RBP16.2■□□□□ 0.18
TNFSF13-202ENST00000349228 ADPGKQ9BRR6 497 aa16.2■□□□□ 0.18
TNFSF13-202ENST00000349228 SDCBP2Q9H190 292 aa16.2■□□□□ 0.18
TNFSF13-202ENST00000349228 ITGA11Q9UKX5 1188 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms