RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 ATP5BP06576 529 aaKnown RBP18.12■□□□□ 0.49
SPAST-202ENST00000345662 PYGLP06737 847 aa18.12■□□□□ 0.49
SPAST-202ENST00000345662 PTGER2P43116 358 aa18.12■□□□□ 0.49
SPAST-202ENST00000345662 XKR3Q5GH77 459 aa18.12■□□□□ 0.49
SPAST-202ENST00000345662 TNIP3Q96KP6 325 aa18.12■□□□□ 0.49
SPAST-202ENST00000345662 SH3GL1Q99961 368 aa18.12■□□□□ 0.49
SPAST-202ENST00000345662 RIC8BQ9NVN3 520 aa18.12■□□□□ 0.49
SPAST-202ENST00000345662 COMMD3-BMI1R4GMX3 469 aa18.12■□□□□ 0.49
SPAST-202ENST00000345662 ADGRB3O60242 1522 aa18.11■□□□□ 0.49
SPAST-202ENST00000345662 A0A1B0GW55 424 aa18.11■□□□□ 0.49
SPAST-202ENST00000345662 EXTL3O43909 919 aa18.11■□□□□ 0.49
SPAST-202ENST00000345662 TBC1D12O60347 775 aa18.11■□□□□ 0.49
SPAST-202ENST00000345662 DUX4L2P0CJ85 424 aa18.11■□□□□ 0.49
SPAST-202ENST00000345662 DUX4L3P0CJ86 424 aa18.11■□□□□ 0.49
SPAST-202ENST00000345662 DUX4L4P0CJ87 422 aa18.11■□□□□ 0.49
SPAST-202ENST00000345662 DUX4L5P0CJ88 424 aa18.11■□□□□ 0.49
SPAST-202ENST00000345662 DUX4L6P0CJ89 424 aa18.11■□□□□ 0.49
SPAST-202ENST00000345662 DUX4L7P0CJ90 424 aa18.11■□□□□ 0.49
SPAST-202ENST00000345662 TJAP1Q5JTD0 557 aa18.11■□□□□ 0.49
SPAST-202ENST00000345662 CYP4A22Q5TCH4 519 aa18.11■□□□□ 0.49
SPAST-202ENST00000345662 TMC5Q6UXY8 1006 aa18.11■□□□□ 0.49
SPAST-202ENST00000345662 THEM5Q8N1Q8 247 aa18.11■□□□□ 0.49
SPAST-202ENST00000345662 ZNF280CQ8ND82 737 aa18.11■□□□□ 0.49
SPAST-202ENST00000345662 RIN3Q8TB24 985 aa18.11■□□□□ 0.49
SPAST-202ENST00000345662 SLC20A1Q8WUM9 679 aa18.11■□□□□ 0.49
SPAST-202ENST00000345662 NDFIP2Q9NV92 336 aa18.11■□□□□ 0.49
SPAST-202ENST00000345662 DUX4Q9UBX2 424 aa18.11■□□□□ 0.49
SPAST-202ENST00000345662 FBXO40Q9UH90 709 aa18.11■□□□□ 0.49
SPAST-202ENST00000345662 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.11■□□□□ 0.49
SPAST-202ENST00000345662 LIN7AO14910 233 aaPredicted RBP18.11■□□□□ 0.49
SPAST-202ENST00000345662 RASSF9O75901 435 aa18.11■□□□□ 0.49
SPAST-202ENST00000345662 C21orf59P57076 290 aa18.11■□□□□ 0.49
SPAST-202ENST00000345662 TAS2R42Q7RTR8 314 aa18.11■□□□□ 0.49
SPAST-202ENST00000345662 TRIM69Q86WT6 500 aa18.11■□□□□ 0.49
SPAST-202ENST00000345662 STX19Q8N4C7 294 aa18.11■□□□□ 0.49
SPAST-202ENST00000345662 DCUN1D5Q9BTE7 237 aa18.11■□□□□ 0.49
SPAST-202ENST00000345662 JPH1Q9HDC5 661 aaPredicted RBP18.11■□□□□ 0.49
SPAST-202ENST00000345662 RRM1P23921 792 aa18.11■□□□□ 0.49
SPAST-202ENST00000345662 CLVS1Q8IUQ0 354 aaPredicted RBP18.11■□□□□ 0.49
SPAST-202ENST00000345662 RNF149Q8NC42 400 aa18.11■□□□□ 0.49
SPAST-202ENST00000345662 FAM81AQ8TBF8 368 aa18.11■□□□□ 0.49
SPAST-202ENST00000345662 KAZALD1Q96I82 304 aa18.11■□□□□ 0.49
SPAST-202ENST00000345662 ZNF668Q96K58 619 aaPredicted RBP18.11■□□□□ 0.49
SPAST-202ENST00000345662 RIT2Q99578 217 aa18.11■□□□□ 0.49
SPAST-202ENST00000345662 AP5M1Q9H0R1 490 aa18.11■□□□□ 0.49
SPAST-202ENST00000345662 NARFQ9UHQ1 456 aa18.11■□□□□ 0.49
SPAST-202ENST00000345662 MYRFQ9Y2G1 1151 aa18.11■□□□□ 0.49
SPAST-202ENST00000345662 FAM32AQ9Y421 112 aaKnown RBP18.11■□□□□ 0.49
SPAST-202ENST00000345662 FAM83EQ2M2I3 478 aa18.11■□□□□ 0.49
SPAST-202ENST00000345662 ZFP1Q6P2D0 407 aa18.11■□□□□ 0.49
SPAST-202ENST00000345662 SHCBP1Q8NEM2 672 aa18.11■□□□□ 0.49
SPAST-202ENST00000345662 SLC5A5Q92911 643 aa18.11■□□□□ 0.49
SPAST-202ENST00000345662 EPS8L2Q9H6S3 715 aa18.11■□□□□ 0.49
SPAST-202ENST00000345662 PCDH9Q9HC56 1237 aa18.11■□□□□ 0.49
SPAST-202ENST00000345662 LRRC4BQ9NT99 713 aa18.11■□□□□ 0.49
SPAST-202ENST00000345662 USP21Q9UK80 565 aa18.11■□□□□ 0.49
SPAST-202ENST00000345662 AGAP1Q9UPQ3 857 aa18.11■□□□□ 0.49
SPAST-202ENST00000345662 RPS6KL1Q9Y6S9 549 aa18.11■□□□□ 0.49
SPAST-202ENST00000345662 A0A087X0B3 334 aa18.1■□□□□ 0.49
SPAST-202ENST00000345662 XRCC4Q13426 336 aa18.1■□□□□ 0.49
SPAST-202ENST00000345662 GIT2Q14161 759 aa18.1■□□□□ 0.49
SPAST-202ENST00000345662 PKN2Q16513 984 aaKnown RBP18.1■□□□□ 0.49
SPAST-202ENST00000345662 KCTD21Q4G0X4 260 aa18.1■□□□□ 0.49
SPAST-202ENST00000345662 TCHHL1Q5QJ38 904 aaPredicted RBP18.1■□□□□ 0.49
SPAST-202ENST00000345662 TBC1D10AQ9BXI6 508 aa18.1■□□□□ 0.49
SPAST-202ENST00000345662 DMAP1Q9NPF5 467 aaPredicted RBP18.1■□□□□ 0.49
SPAST-202ENST00000345662 ARMCX1Q9P291 453 aa18.1■□□□□ 0.49
SPAST-202ENST00000345662 TSR3Q9UJK0 312 aaKnown RBP18.1■□□□□ 0.49
SPAST-202ENST00000345662 EEF2KO00418 725 aaKnown RBP18.1■□□□□ 0.49
SPAST-202ENST00000345662 MED24O75448 989 aa18.1■□□□□ 0.49
SPAST-202ENST00000345662 RPS6KA4O75676 772 aa18.1■□□□□ 0.49
SPAST-202ENST00000345662 MOCS2O96007 188 aaPredicted RBP18.1■□□□□ 0.49
SPAST-202ENST00000345662 AMPD2Q01433 879 aa18.1■□□□□ 0.49
SPAST-202ENST00000345662 CUL2Q13617 745 aa18.1■□□□□ 0.49
SPAST-202ENST00000345662 SPOCD1Q6ZMY3 1216 aa18.1■□□□□ 0.49
SPAST-202ENST00000345662 RRM2BQ7LG56 351 aa18.1■□□□□ 0.49
SPAST-202ENST00000345662 APOPT1Q96IL0 206 aa18.1■□□□□ 0.49
SPAST-202ENST00000345662 TRIM62Q9BVG3 475 aa18.1■□□□□ 0.49
SPAST-202ENST00000345662 GPBP1L1Q9HC44 474 aaPredicted RBP18.1■□□□□ 0.49
SPAST-202ENST00000345662 C1orf232A0A0U1RR37 186 aa18.1■□□□□ 0.49
SPAST-202ENST00000345662 DNALI1O14645 258 aaPredicted RBP18.1■□□□□ 0.49
SPAST-202ENST00000345662 RARAP10276 462 aa18.1■□□□□ 0.49
SPAST-202ENST00000345662 RPL10AP62906 217 aaKnown RBP18.1■□□□□ 0.49
SPAST-202ENST00000345662 PDIA6Q15084 440 aa18.1■□□□□ 0.49
SPAST-202ENST00000345662 PKN1Q16512 942 aa18.1■□□□□ 0.49
SPAST-202ENST00000345662 SGF29Q96ES7 293 aa18.1■□□□□ 0.49
SPAST-202ENST00000345662 ECSITQ9BQ95 431 aa18.1■□□□□ 0.49
SPAST-202ENST00000345662 NAT9Q9BTE0 207 aa18.1■□□□□ 0.49
SPAST-202ENST00000345662 SUGT1Q9Y2Z0 365 aa18.1■□□□□ 0.49
SPAST-202ENST00000345662 LZTS3O60299 673 aaPredicted RBP18.1■□□□□ 0.49
SPAST-202ENST00000345662 DENND1BQ6P3S1 775 aa18.1■□□□□ 0.49
SPAST-202ENST00000345662 CLEC10AQ8IUN9 316 aa18.1■□□□□ 0.49
SPAST-202ENST00000345662 SCFD2Q8WU76 684 aa18.1■□□□□ 0.49
SPAST-202ENST00000345662 KIAA1683Q9H0B3 1180 aa18.1■□□□□ 0.49
SPAST-202ENST00000345662 COPG1Q9Y678 874 aaKnown RBP18.1■□□□□ 0.49
SPAST-202ENST00000345662 PYGMP11217 842 aa18.09■□□□□ 0.49
SPAST-202ENST00000345662 FCGR1AP12314 374 aa18.09■□□□□ 0.49
SPAST-202ENST00000345662 CPA3P15088 417 aa18.09■□□□□ 0.49
SPAST-202ENST00000345662 GSTA3Q16772 222 aa18.09■□□□□ 0.49
SPAST-202ENST00000345662 SUPT20HL1Q3ZLR7 823 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms