RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 PCED1BQ96HM7 432 aa15.41■□□□□ 0.06
HMGN3-202ENST00000344726 BCO2Q9BYV7 579 aa15.41■□□□□ 0.06
HMGN3-202ENST00000344726 SNX25Q9H3E2 840 aa15.41■□□□□ 0.06
HMGN3-202ENST00000344726 TASP1Q9H6P5 420 aa15.41■□□□□ 0.06
HMGN3-202ENST00000344726 NDRG2Q9UN36 371 aaKnown RBP15.41■□□□□ 0.06
HMGN3-202ENST00000344726 MAGED2Q9UNF1 606 aaPredicted RBP15.41■□□□□ 0.06
HMGN3-202ENST00000344726 CCL26Q9Y258 94 aa15.41■□□□□ 0.06
HMGN3-202ENST00000344726 FRMD4BQ9Y2L6 1034 aa15.41■□□□□ 0.06
HMGN3-202ENST00000344726 PCDHA5Q9Y5H7 936 aa15.41■□□□□ 0.06
HMGN3-202ENST00000344726 CHADO15335 359 aa15.4■□□□□ 0.06
HMGN3-202ENST00000344726 GADD45BO75293 160 aaPredicted RBP15.4■□□□□ 0.06
HMGN3-202ENST00000344726 NOL4O94818 638 aa15.4■□□□□ 0.06
HMGN3-202ENST00000344726 FAM163BP0C2L3 166 aa15.4■□□□□ 0.06
HMGN3-202ENST00000344726 TRIM49P0CI25 452 aa15.4■□□□□ 0.06
HMGN3-202ENST00000344726 TRIM49CP0CI26 452 aa15.4■□□□□ 0.06
HMGN3-202ENST00000344726 CSH1P0DML2 217 aa15.4■□□□□ 0.06
HMGN3-202ENST00000344726 CSH2P0DML3 217 aa15.4■□□□□ 0.06
HMGN3-202ENST00000344726 BDNFP23560 247 aa15.4■□□□□ 0.06
HMGN3-202ENST00000344726 PRCPP42785 496 aa15.4■□□□□ 0.06
HMGN3-202ENST00000344726 MAGEA11P43364 429 aa15.4■□□□□ 0.06
HMGN3-202ENST00000344726 VAMP7P51809 220 aa15.4■□□□□ 0.06
HMGN3-202ENST00000344726 CACNA2D1P54289 1103 aa15.4■□□□□ 0.06
HMGN3-202ENST00000344726 PPP3CAQ08209 521 aa15.4■□□□□ 0.06
HMGN3-202ENST00000344726 ADAM9Q13443 819 aa15.4■□□□□ 0.06
HMGN3-202ENST00000344726 ARHGAP15Q53QZ3 475 aa15.4■□□□□ 0.06
HMGN3-202ENST00000344726 SPOPLQ6IQ16 392 aa15.4■□□□□ 0.06
HMGN3-202ENST00000344726 TXNDC11Q6PKC3 985 aa15.4■□□□□ 0.06
HMGN3-202ENST00000344726 SCARA5Q6ZMJ2 495 aa15.4■□□□□ 0.06
HMGN3-202ENST00000344726 C4orf50Q6ZRC1 276 aa15.4■□□□□ 0.06
HMGN3-202ENST00000344726 TTC8Q8TAM2 541 aa15.4■□□□□ 0.06
HMGN3-202ENST00000344726 NKD2Q969F2 451 aaPredicted RBP15.4■□□□□ 0.06
HMGN3-202ENST00000344726 EEF2KMTQ96G04 330 aa15.4■□□□□ 0.06
HMGN3-202ENST00000344726 MYRFLQ96LU7 910 aa15.4■□□□□ 0.06
HMGN3-202ENST00000344726 TIGD1Q96MW7 591 aa15.4■□□□□ 0.06
HMGN3-202ENST00000344726 TMEM30AQ9NV96 361 aa15.4■□□□□ 0.06
HMGN3-202ENST00000344726 SPATA6Q9NWH7 488 aaPredicted RBP15.4■□□□□ 0.06
HMGN3-202ENST00000344726 MAGEC2Q9UBF1 373 aaPredicted RBP15.4■□□□□ 0.06
HMGN3-202ENST00000344726 RIF1Q5UIP0 2472 aaKnown RBP15.39■□□□□ 0.05
HMGN3-202ENST00000344726 IKBKBO14920 756 aa15.39■□□□□ 0.05
HMGN3-202ENST00000344726 HLA-DRAP01903 254 aa15.39■□□□□ 0.05
HMGN3-202ENST00000344726 PTPN1P18031 435 aaKnown RBP15.39■□□□□ 0.05
HMGN3-202ENST00000344726 CCNE1P24864 410 aa15.39■□□□□ 0.05
HMGN3-202ENST00000344726 RPS9P46781 194 aaKnown RBP15.39■□□□□ 0.05
HMGN3-202ENST00000344726 MCCD1P59942 119 aaPredicted RBP15.39■□□□□ 0.05
HMGN3-202ENST00000344726 CYP27A1Q02318 531 aa15.39■□□□□ 0.05
HMGN3-202ENST00000344726 TNK2Q07912 1038 aa15.39■□□□□ 0.05
HMGN3-202ENST00000344726 ZNF667Q5HYK9 610 aa15.39■□□□□ 0.05
HMGN3-202ENST00000344726 ZNF658Q5TYW1 1059 aaPredicted RBP15.39■□□□□ 0.05
HMGN3-202ENST00000344726 TXNDC8Q6A555 127 aa15.39■□□□□ 0.05
HMGN3-202ENST00000344726 TSSK4Q6SA08 328 aa15.39■□□□□ 0.05
HMGN3-202ENST00000344726 FAM186BQ8IYM0 893 aa15.39■□□□□ 0.05
HMGN3-202ENST00000344726 MAB21L3Q8N8X9 362 aa15.39■□□□□ 0.05
HMGN3-202ENST00000344726 FAM3CQ92520 227 aa15.39■□□□□ 0.05
HMGN3-202ENST00000344726 E2F7Q96AV8 911 aa15.39■□□□□ 0.05
HMGN3-202ENST00000344726 TRMT2BQ96GJ1 504 aaKnown RBP15.39■□□□□ 0.05
HMGN3-202ENST00000344726 CCDC34Q96HJ3 373 aa15.39■□□□□ 0.05
HMGN3-202ENST00000344726 GSDMAQ96QA5 445 aa15.39■□□□□ 0.05
HMGN3-202ENST00000344726 GCNAQ96QF7 691 aa15.39■□□□□ 0.05
HMGN3-202ENST00000344726 OBP2AQ9NY56 170 aa15.39■□□□□ 0.05
HMGN3-202ENST00000344726 GTSE1Q9NYZ3 720 aa15.39■□□□□ 0.05
HMGN3-202ENST00000344726 GVINP1Q7Z2Y8 2422 aa15.39■□□□□ 0.05
HMGN3-202ENST00000344726 ATG2BQ96BY7 2078 aa15.39■□□□□ 0.05
HMGN3-202ENST00000344726 A8MXQ7 604 aa15.38■□□□□ 0.05
HMGN3-202ENST00000344726 CLDN5O00501 218 aa15.38■□□□□ 0.05
HMGN3-202ENST00000344726 ASS1P00966 412 aaKnown RBP15.38■□□□□ 0.05
HMGN3-202ENST00000344726 PSMC2P35998 433 aaKnown RBP15.38■□□□□ 0.05
HMGN3-202ENST00000344726 GCLMP48507 274 aa15.38■□□□□ 0.05
HMGN3-202ENST00000344726 PMS1P54277 932 aaKnown RBP15.38■□□□□ 0.05
HMGN3-202ENST00000344726 USP46P62068 366 aa15.38■□□□□ 0.05
HMGN3-202ENST00000344726 MTAPQ13126 283 aa15.38■□□□□ 0.05
HMGN3-202ENST00000344726 GAS6Q14393 721 aa15.38■□□□□ 0.05
HMGN3-202ENST00000344726 MAPRE1Q15691 268 aaKnown RBP15.38■□□□□ 0.05
HMGN3-202ENST00000344726 EDRF1Q3B7T1 1238 aa15.38■□□□□ 0.05
HMGN3-202ENST00000344726 COBLL1Q53SF7 1204 aa15.38■□□□□ 0.05
HMGN3-202ENST00000344726 VSTM1Q6UX27 236 aa15.38■□□□□ 0.05
HMGN3-202ENST00000344726 INTS8Q75QN2 995 aaKnown RBP15.38■□□□□ 0.05
HMGN3-202ENST00000344726 YAF2Q8IY57 180 aa15.38■□□□□ 0.05
HMGN3-202ENST00000344726 CMTM8Q8IZV2 173 aa15.38■□□□□ 0.05
HMGN3-202ENST00000344726 B3GALNT2Q8NCR0 500 aa15.38■□□□□ 0.05
HMGN3-202ENST00000344726 BPIFB1Q8TDL5 484 aa15.38■□□□□ 0.05
HMGN3-202ENST00000344726 USP13Q92995 863 aaPredicted RBP15.38■□□□□ 0.05
HMGN3-202ENST00000344726 SMARCE1Q969G3 411 aa15.38■□□□□ 0.05
HMGN3-202ENST00000344726 CHFRQ96EP1 664 aa15.38■□□□□ 0.05
HMGN3-202ENST00000344726 SLC22A12Q96S37 553 aa15.38■□□□□ 0.05
HMGN3-202ENST00000344726 NELL2Q99435 816 aa15.38■□□□□ 0.05
HMGN3-202ENST00000344726 B3GNT5Q9BYG0 378 aa15.38■□□□□ 0.05
HMGN3-202ENST00000344726 ZNF518BQ9C0D4 1074 aa15.38■□□□□ 0.05
HMGN3-202ENST00000344726 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.38■□□□□ 0.05
HMGN3-202ENST00000344726 PRMT8Q9NR22 394 aaPredicted RBP15.38■□□□□ 0.05
HMGN3-202ENST00000344726 RMND1Q9NWS8 449 aa15.38■□□□□ 0.05
HMGN3-202ENST00000344726 HMGXB4Q9UGU5 601 aa15.38■□□□□ 0.05
HMGN3-202ENST00000344726 CIZ1Q9ULV3 898 aaPredicted RBP15.38■□□□□ 0.05
HMGN3-202ENST00000344726 FAM186AA6NE01 2351 aa15.38■□□□□ 0.05
HMGN3-202ENST00000344726 OTOL1A6NHN0 477 aaPredicted RBP15.37■□□□□ 0.05
HMGN3-202ENST00000344726 F8VP50 259 aa15.37■□□□□ 0.05
HMGN3-202ENST00000344726 MAN2B1O00754 1011 aa15.37■□□□□ 0.05
HMGN3-202ENST00000344726 LAMTOR5O43504 91 aa15.37■□□□□ 0.05
HMGN3-202ENST00000344726 CHRNB1P11230 501 aa15.37■□□□□ 0.05
HMGN3-202ENST00000344726 TDGF1P13385 188 aa15.37■□□□□ 0.05
HMGN3-202ENST00000344726 RPL13P26373 211 aaKnown RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms