RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 CHADO15335 359 aa17.12■□□□□ 0.33
ATG4B-201ENST00000344376 ASS1P00966 412 aaKnown RBP17.12■□□□□ 0.33
ATG4B-201ENST00000344376 GTF2H1P32780 548 aa17.12■□□□□ 0.33
ATG4B-201ENST00000344376 PPP1R2P41236 205 aa17.12■□□□□ 0.33
ATG4B-201ENST00000344376 RAP1GAPP47736 663 aa17.12■□□□□ 0.33
ATG4B-201ENST00000344376 CDH8P55286 799 aa17.12■□□□□ 0.33
ATG4B-201ENST00000344376 FCHO2Q0JRZ9 810 aa17.12■□□□□ 0.33
ATG4B-201ENST00000344376 ARHGAP29Q52LW3 1261 aa17.12■□□□□ 0.33
ATG4B-201ENST00000344376 C1orf220Q5T0J3 134 aa17.12■□□□□ 0.33
ATG4B-201ENST00000344376 TMEM150AQ86TG1 271 aa17.12■□□□□ 0.33
ATG4B-201ENST00000344376 CELF5Q8N6W0 485 aaKnown RBP17.12■□□□□ 0.33
ATG4B-201ENST00000344376 MAB21L3Q8N8X9 362 aa17.12■□□□□ 0.33
ATG4B-201ENST00000344376 ERCC4Q92889 916 aaPredicted RBP17.12■□□□□ 0.33
ATG4B-201ENST00000344376 SLC46A2Q9BY10 475 aa17.12■□□□□ 0.33
ATG4B-201ENST00000344376 OSBPL6Q9BZF3 934 aa17.12■□□□□ 0.33
ATG4B-201ENST00000344376 MMRN2Q9H8L6 949 aa17.12■□□□□ 0.33
ATG4B-201ENST00000344376 KIF9Q9HAQ2 790 aa17.12■□□□□ 0.33
ATG4B-201ENST00000344376 TMEM8AQ9HCN3 771 aa17.12■□□□□ 0.33
ATG4B-201ENST00000344376 LTB4R2Q9NPC1 389 aa17.12■□□□□ 0.33
ATG4B-201ENST00000344376 THG1LQ9NWX6 298 aaKnown RBP17.12■□□□□ 0.33
ATG4B-201ENST00000344376 PSMA7O14818 248 aa17.11■□□□□ 0.33
ATG4B-201ENST00000344376 NCAM2O15394 837 aa17.11■□□□□ 0.33
ATG4B-201ENST00000344376 SLC16A3O15427 465 aaKnown RBP17.11■□□□□ 0.33
ATG4B-201ENST00000344376 PRAMEF12O95522 483 aa17.11■□□□□ 0.33
ATG4B-201ENST00000344376 DCNP07585 359 aaKnown RBP17.11■□□□□ 0.33
ATG4B-201ENST00000344376 FKBP3Q00688 224 aaKnown RBP17.11■□□□□ 0.33
ATG4B-201ENST00000344376 PLCB2Q00722 1185 aa17.11■□□□□ 0.33
ATG4B-201ENST00000344376 LRRC63Q05C16 580 aa17.11■□□□□ 0.33
ATG4B-201ENST00000344376 TXNDC8Q6A555 127 aa17.11■□□□□ 0.33
ATG4B-201ENST00000344376 DENND5BQ6ZUT9 1274 aa17.11■□□□□ 0.33
ATG4B-201ENST00000344376 MON1AQ86VX9 555 aa17.11■□□□□ 0.33
ATG4B-201ENST00000344376 GPIHBP1Q8IV16 184 aa17.11■□□□□ 0.33
ATG4B-201ENST00000344376 BPIFB1Q8TDL5 484 aa17.11■□□□□ 0.33
ATG4B-201ENST00000344376 RSPRY1Q96DX4 576 aa17.11■□□□□ 0.33
ATG4B-201ENST00000344376 C8orf48Q96LL4 319 aa17.11■□□□□ 0.33
ATG4B-201ENST00000344376 BCO2Q9BYV7 579 aa17.11■□□□□ 0.33
ATG4B-201ENST00000344376 DNAI2Q9GZS0 605 aa17.11■□□□□ 0.33
ATG4B-201ENST00000344376 NME7Q9Y5B8 376 aa17.11■□□□□ 0.33
ATG4B-201ENST00000344376 NCANO14594 1321 aa17.11■□□□□ 0.33
ATG4B-201ENST00000344376 FAM170BA6NMN3 283 aa17.11■□□□□ 0.33
ATG4B-201ENST00000344376 GLULP15104 373 aa17.11■□□□□ 0.33
ATG4B-201ENST00000344376 MAGEA9P43362 315 aa17.11■□□□□ 0.33
ATG4B-201ENST00000344376 NOP14P78316 857 aaKnown RBP17.11■□□□□ 0.33
ATG4B-201ENST00000344376 PPP3CAQ08209 521 aa17.11■□□□□ 0.33
ATG4B-201ENST00000344376 KRT39Q6A163 491 aa17.11■□□□□ 0.33
ATG4B-201ENST00000344376 ADSSL1Q8N142 457 aa17.11■□□□□ 0.33
ATG4B-201ENST00000344376 TAS1R2Q8TE23 839 aa17.11■□□□□ 0.33
ATG4B-201ENST00000344376 EEF2KMTQ96G04 330 aa17.11■□□□□ 0.33
ATG4B-201ENST00000344376 MSANTD3Q96H12 275 aa17.11■□□□□ 0.33
ATG4B-201ENST00000344376 MED10Q9BTT4 135 aa17.11■□□□□ 0.33
ATG4B-201ENST00000344376 TRPC7Q9HCX4 862 aa17.11■□□□□ 0.33
ATG4B-201ENST00000344376 PIAS3Q9Y6X2 628 aa17.11■□□□□ 0.33
ATG4B-201ENST00000344376 TRAV19A0A0A6YYK7 116 aa17.1■□□□□ 0.33
ATG4B-201ENST00000344376 F8VP50 259 aa17.1■□□□□ 0.33
ATG4B-201ENST00000344376 GADD45BO75293 160 aaPredicted RBP17.1■□□□□ 0.33
ATG4B-201ENST00000344376 CD72P21854 359 aa17.1■□□□□ 0.33
ATG4B-201ENST00000344376 MXI1P50539 228 aa17.1■□□□□ 0.33
ATG4B-201ENST00000344376 PDE6CP51160 858 aa17.1■□□□□ 0.33
ATG4B-201ENST00000344376 SPOPLQ6IQ16 392 aa17.1■□□□□ 0.33
ATG4B-201ENST00000344376 C1orf228Q6PIY5 440 aa17.1■□□□□ 0.33
ATG4B-201ENST00000344376 UNC93AQ86WB7 457 aa17.1■□□□□ 0.33
ATG4B-201ENST00000344376 ELMO3Q96BJ8 720 aa17.1■□□□□ 0.33
ATG4B-201ENST00000344376 DHTKD1Q96HY7 919 aaPredicted RBP17.1■□□□□ 0.33
ATG4B-201ENST00000344376 B3GNT5Q9BYG0 378 aa17.1■□□□□ 0.33
ATG4B-201ENST00000344376 ZNF518BQ9C0D4 1074 aa17.1■□□□□ 0.33
ATG4B-201ENST00000344376 NIF3L1Q9GZT8 377 aa17.1■□□□□ 0.33
ATG4B-201ENST00000344376 SMG9Q9H0W8 520 aaKnown RBP17.1■□□□□ 0.33
ATG4B-201ENST00000344376 SDCBP2Q9H190 292 aa17.1■□□□□ 0.33
ATG4B-201ENST00000344376 MAN1B1Q9UKM7 699 aa17.1■□□□□ 0.33
ATG4B-201ENST00000344376 USP17L7P0C7H9 530 aa17.09■□□□□ 0.33
ATG4B-201ENST00000344376 ASPAP45381 313 aa17.09■□□□□ 0.33
ATG4B-201ENST00000344376 KPNA1P52294 538 aaPredicted RBP17.09■□□□□ 0.33
ATG4B-201ENST00000344376 MLLT6P55198 1093 aaPredicted RBP17.09■□□□□ 0.33
ATG4B-201ENST00000344376 UBE2HP62256 183 aa17.09■□□□□ 0.33
ATG4B-201ENST00000344376 ANGPT1Q15389 498 aa17.09■□□□□ 0.33
ATG4B-201ENST00000344376 TCERG1LQ5VWI1 586 aa17.09■□□□□ 0.33
ATG4B-201ENST00000344376 ANKRD40Q6AI12 368 aa17.09■□□□□ 0.33
ATG4B-201ENST00000344376 SMARCD1Q96GM5 515 aa17.09■□□□□ 0.33
ATG4B-201ENST00000344376 C8orf33Q9H7E9 229 aaPredicted RBP17.09■□□□□ 0.33
ATG4B-201ENST00000344376 CYP3A43Q9HB55 503 aa17.09■□□□□ 0.33
ATG4B-201ENST00000344376 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.09■□□□□ 0.33
ATG4B-201ENST00000344376 TDP1Q9NUW8 608 aa17.09■□□□□ 0.33
ATG4B-201ENST00000344376 FAM86C1Q9NVL1 165 aa17.09■□□□□ 0.33
ATG4B-201ENST00000344376 TRPM5Q9NZQ8 1165 aa17.09■□□□□ 0.33
ATG4B-201ENST00000344376 DLGAP2Q9P1A6 1054 aa17.09■□□□□ 0.33
ATG4B-201ENST00000344376 WDFY4Q6ZS81 3184 aa17.09■□□□□ 0.33
ATG4B-201ENST00000344376 NUP210Q8TEM1 1887 aaPredicted RBP17.08■□□□□ 0.32
ATG4B-201ENST00000344376 ARNTLO00327 626 aa17.08■□□□□ 0.32
ATG4B-201ENST00000344376 CLDN5O00501 218 aa17.08■□□□□ 0.32
ATG4B-201ENST00000344376 TADA3O75528 432 aa17.08■□□□□ 0.32
ATG4B-201ENST00000344376 CKMP06732 381 aa17.08■□□□□ 0.32
ATG4B-201ENST00000344376 CCNE1P24864 410 aa17.08■□□□□ 0.32
ATG4B-201ENST00000344376 TARSP26639 723 aaKnown RBP17.08■□□□□ 0.32
ATG4B-201ENST00000344376 PPP3CCP48454 512 aa17.08■□□□□ 0.32
ATG4B-201ENST00000344376 NDST1P52848 882 aa17.08■□□□□ 0.32
ATG4B-201ENST00000344376 MCCD1P59942 119 aaPredicted RBP17.08■□□□□ 0.32
ATG4B-201ENST00000344376 ZNF268Q14587 947 aaPredicted RBP17.08■□□□□ 0.32
ATG4B-201ENST00000344376 DCAF17Q5H9S7 520 aaPredicted RBP17.08■□□□□ 0.32
ATG4B-201ENST00000344376 ISM2Q6H9L7 571 aa17.08■□□□□ 0.32
ATG4B-201ENST00000344376 CC2D1AQ6P1N0 951 aaPredicted RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms