RNA–Protein interactions for RNA: ENST00000342192.8

UBE2L3-201, Transcript of ubiquitin conjugating enzyme E2 L3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2L3, Length 3,028 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2L3-201ENST00000342192 RNF149Q8NC42 400 aa12.94□□□□□ -0.34
UBE2L3-201ENST00000342192 JOSD2Q8TAC2 188 aa12.94□□□□□ -0.34
UBE2L3-201ENST00000342192 LHX5Q9H2C1 402 aa12.94□□□□□ -0.34
UBE2L3-201ENST00000342192 ZWILCHQ9H900 591 aa12.94□□□□□ -0.34
UBE2L3-201ENST00000342192 LMCD1Q9NZU5 365 aa12.94□□□□□ -0.34
UBE2L3-201ENST00000342192 FETUBQ9UGM5 382 aa12.94□□□□□ -0.34
UBE2L3-201ENST00000342192 CYTH4Q9UIA0 394 aa12.94□□□□□ -0.34
UBE2L3-201ENST00000342192 GRID1Q9ULK0 1009 aa12.94□□□□□ -0.34
UBE2L3-201ENST00000342192 PHTF1Q9UMS5 762 aa12.94□□□□□ -0.34
UBE2L3-201ENST00000342192 ANK1P16157 1881 aa12.93□□□□□ -0.34
UBE2L3-201ENST00000342192 GOLGA8MH3BSY2 632 aa12.93□□□□□ -0.34
UBE2L3-201ENST00000342192 FZD9O00144 591 aa12.93□□□□□ -0.34
UBE2L3-201ENST00000342192 TYROBPO43914 113 aa12.93□□□□□ -0.34
UBE2L3-201ENST00000342192 PEX10O60683 326 aa12.93□□□□□ -0.34
UBE2L3-201ENST00000342192 BANF1O75531 89 aa12.93□□□□□ -0.34
UBE2L3-201ENST00000342192 TNNC2P02585 160 aa12.93□□□□□ -0.34
UBE2L3-201ENST00000342192 KRT16P08779 473 aa12.93□□□□□ -0.34
UBE2L3-201ENST00000342192 RPA3P35244 121 aaPredicted RBP12.93□□□□□ -0.34
UBE2L3-201ENST00000342192 PSMC4P43686 418 aa12.93□□□□□ -0.34
UBE2L3-201ENST00000342192 GDF10P55107 478 aa12.93□□□□□ -0.34
UBE2L3-201ENST00000342192 LACTBP83111 547 aaPredicted RBP12.93□□□□□ -0.34
UBE2L3-201ENST00000342192 TAZQ16635 292 aa12.93□□□□□ -0.34
UBE2L3-201ENST00000342192 MPZL3Q6UWV2 235 aa12.93□□□□□ -0.34
UBE2L3-201ENST00000342192 ANKMY2Q8IV38 441 aa12.93□□□□□ -0.34
UBE2L3-201ENST00000342192 KIF2BQ8N4N8 673 aa12.93□□□□□ -0.34
UBE2L3-201ENST00000342192 FBF1Q8TES7 1133 aa12.93□□□□□ -0.34
UBE2L3-201ENST00000342192 NSMCE1Q8WV22 266 aa12.93□□□□□ -0.34
UBE2L3-201ENST00000342192 CPT1BQ92523 772 aa12.93□□□□□ -0.34
UBE2L3-201ENST00000342192 SPOCK2Q92563 424 aa12.93□□□□□ -0.34
UBE2L3-201ENST00000342192 C2orf40Q9H1Z8 148 aa12.93□□□□□ -0.34
UBE2L3-201ENST00000342192 SAE1Q9UBE0 346 aaPredicted RBP12.93□□□□□ -0.34
UBE2L3-201ENST00000342192 TJP2Q9UDY2 1190 aa12.93□□□□□ -0.34
UBE2L3-201ENST00000342192 POLIQ9UNA4 740 aa12.93□□□□□ -0.34
UBE2L3-201ENST00000342192 MED7O43513 233 aa12.93□□□□□ -0.34
UBE2L3-201ENST00000342192 CST8O60676 142 aa12.93□□□□□ -0.34
UBE2L3-201ENST00000342192 LGR5O75473 907 aa12.93□□□□□ -0.34
UBE2L3-201ENST00000342192 CD19P15391 556 aa12.93□□□□□ -0.34
UBE2L3-201ENST00000342192 ARL4CP56559 192 aa12.93□□□□□ -0.34
UBE2L3-201ENST00000342192 GEMIN4P57678 1058 aaKnown RBP12.93□□□□□ -0.34
UBE2L3-201ENST00000342192 MOGSQ13724 837 aa12.93□□□□□ -0.34
UBE2L3-201ENST00000342192 HADHQ16836 314 aaKnown RBP12.93□□□□□ -0.34
UBE2L3-201ENST00000342192 ANKRD22Q5VYY1 191 aa12.93□□□□□ -0.34
UBE2L3-201ENST00000342192 DEFB132Q7Z7B7 95 aa12.93□□□□□ -0.34
UBE2L3-201ENST00000342192 RIOX2Q8IUF8 465 aa12.93□□□□□ -0.34
UBE2L3-201ENST00000342192 LRRC71Q8N4P6 559 aa12.93□□□□□ -0.34
UBE2L3-201ENST00000342192 NAT8LQ8N9F0 302 aa12.93□□□□□ -0.34
UBE2L3-201ENST00000342192 ATP11CQ8NB49 1132 aa12.93□□□□□ -0.34
UBE2L3-201ENST00000342192 ANKRD36BP1Q96IX9 119 aa12.93□□□□□ -0.34
UBE2L3-201ENST00000342192 SSU72Q9NP77 194 aaKnown RBP12.93□□□□□ -0.34
UBE2L3-201ENST00000342192 BTBD7Q9P203 1132 aa12.93□□□□□ -0.34
UBE2L3-201ENST00000342192 SNCAIPQ9Y6H5 919 aa12.93□□□□□ -0.34
UBE2L3-201ENST00000342192 IGKV6-21A0A0C4DH24 114 aa12.92□□□□□ -0.34
UBE2L3-201ENST00000342192 ZBTB42B2RXF5 422 aa12.92□□□□□ -0.34
UBE2L3-201ENST00000342192 B4GALT4O60513 344 aa12.92□□□□□ -0.34
UBE2L3-201ENST00000342192 UNC5CO95185 931 aa12.92□□□□□ -0.34
UBE2L3-201ENST00000342192 TGFB3P10600 412 aa12.92□□□□□ -0.34
UBE2L3-201ENST00000342192 CA4P22748 312 aa12.92□□□□□ -0.34
UBE2L3-201ENST00000342192 KDELR1P24390 212 aa12.92□□□□□ -0.34
UBE2L3-201ENST00000342192 PHBP35232 272 aa12.92□□□□□ -0.34
UBE2L3-201ENST00000342192 PSMC1P62191 440 aaKnown RBP12.92□□□□□ -0.34
UBE2L3-201ENST00000342192 GAD2Q05329 585 aa12.92□□□□□ -0.34
UBE2L3-201ENST00000342192 KCNT1Q5JUK3 1230 aa12.92□□□□□ -0.34
UBE2L3-201ENST00000342192 TREML2Q5T2D2 321 aa12.92□□□□□ -0.34
UBE2L3-201ENST00000342192 TSHZ1Q6ZSZ6 1077 aa12.92□□□□□ -0.34
UBE2L3-201ENST00000342192 THNSL1Q8IYQ7 743 aa12.92□□□□□ -0.34
UBE2L3-201ENST00000342192 STAMBPL1Q96FJ0 436 aa12.92□□□□□ -0.34
UBE2L3-201ENST00000342192 PTPRHQ9HD43 1115 aa12.92□□□□□ -0.34
UBE2L3-201ENST00000342192 RABGEF1Q9UJ41 708 aa12.92□□□□□ -0.34
UBE2L3-201ENST00000342192 A0A1W2PPM1 405 aa12.92□□□□□ -0.34
UBE2L3-201ENST00000342192 EDF1O60869 148 aaKnown RBP12.92□□□□□ -0.34
UBE2L3-201ENST00000342192 ITGBL1O95965 494 aaPredicted RBP12.92□□□□□ -0.34
UBE2L3-201ENST00000342192 MARK3P27448 753 aa12.92□□□□□ -0.34
UBE2L3-201ENST00000342192 RAP1GAPP47736 663 aa12.92□□□□□ -0.34
UBE2L3-201ENST00000342192 YARSP54577 528 aaKnown RBP12.92□□□□□ -0.34
UBE2L3-201ENST00000342192 SLC1A5Q15758 541 aa12.92□□□□□ -0.34
UBE2L3-201ENST00000342192 KIAA0319LQ8IZA0 1049 aa12.92□□□□□ -0.34
UBE2L3-201ENST00000342192 LRRC8CQ8TDW0 803 aa12.92□□□□□ -0.34
UBE2L3-201ENST00000342192 MRRFQ96E11 262 aaKnown RBP12.92□□□□□ -0.34
UBE2L3-201ENST00000342192 WDR83Q9BRX9 315 aaKnown RBP12.92□□□□□ -0.34
UBE2L3-201ENST00000342192 MAK16Q9BXY0 300 aaKnown RBP12.92□□□□□ -0.34
UBE2L3-201ENST00000342192 BCO2Q9BYV7 579 aa12.92□□□□□ -0.34
UBE2L3-201ENST00000342192 MYLK2Q9H1R3 596 aa12.92□□□□□ -0.34
UBE2L3-201ENST00000342192 C10orf88Q9H8K7 445 aa12.92□□□□□ -0.34
UBE2L3-201ENST00000342192 SLCO1B3Q9NPD5 702 aa12.92□□□□□ -0.34
UBE2L3-201ENST00000342192 TXLNGQ9NUQ3 528 aa12.92□□□□□ -0.34
UBE2L3-201ENST00000342192 NXF1Q9UBU9 619 aaKnown RBP12.92□□□□□ -0.34
UBE2L3-201ENST00000342192 ZMYND8Q9ULU4 1186 aaPredicted RBP12.92□□□□□ -0.34
UBE2L3-201ENST00000342192 TRIM33Q9UPN9 1127 aa12.92□□□□□ -0.34
UBE2L3-201ENST00000342192 USH1CQ9Y6N9 552 aa12.92□□□□□ -0.34
UBE2L3-201ENST00000342192 PTPRFP10586 1907 aa12.92□□□□□ -0.34
UBE2L3-201ENST00000342192 E7ESA3 106 aa12.91□□□□□ -0.34
UBE2L3-201ENST00000342192 HGSO14964 777 aaPredicted RBP12.91□□□□□ -0.34
UBE2L3-201ENST00000342192 PYGBP11216 843 aa12.91□□□□□ -0.34
UBE2L3-201ENST00000342192 TFDP1Q14186 410 aa12.91□□□□□ -0.34
UBE2L3-201ENST00000342192 EFTUD2Q15029 972 aaKnown RBP eCLIP12.91□□□□□ -0.349e-7■■□□□ 14.2
UBE2L3-201ENST00000342192 LY6KQ17RY6 165 aa12.91□□□□□ -0.34
UBE2L3-201ENST00000342192 MSS51Q4VC12 460 aa12.91□□□□□ -0.34
UBE2L3-201ENST00000342192 FNBP1LQ5T0N5 605 aa12.91□□□□□ -0.34
UBE2L3-201ENST00000342192 ATF7IP2Q5U623 682 aa12.91□□□□□ -0.34
UBE2L3-201ENST00000342192 TRIM50Q86XT4 487 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms