RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 USE1Q9NZ43 259 aa15.81■□□□□ 0.12
COL11A2-201ENST00000341947 USP42Q9H9J4 1324 aaKnown RBP15.81■□□□□ 0.12
COL11A2-201ENST00000341947 DGKIO75912 1065 aa15.81■□□□□ 0.12
COL11A2-201ENST00000341947 CAMK2GQ13555 558 aaPredicted RBP15.81■□□□□ 0.12
COL11A2-201ENST00000341947 GLRA4Q5JXX5 417 aa15.81■□□□□ 0.12
COL11A2-201ENST00000341947 ACAD10Q6JQN1 1059 aa15.81■□□□□ 0.12
COL11A2-201ENST00000341947 PRPF39Q86UA1 669 aaKnown RBP15.81■□□□□ 0.12
COL11A2-201ENST00000341947 AAR2Q9Y312 384 aaKnown RBP15.81■□□□□ 0.12
COL11A2-201ENST00000341947 ALKQ9UM73 1620 aa15.81■□□□□ 0.12
COL11A2-201ENST00000341947 CHD1O14646 1710 aa15.8■□□□□ 0.12
COL11A2-201ENST00000341947 A0A1B0GW55 424 aa15.8■□□□□ 0.12
COL11A2-201ENST00000341947 DUX4L2P0CJ85 424 aa15.8■□□□□ 0.12
COL11A2-201ENST00000341947 DUX4L3P0CJ86 424 aa15.8■□□□□ 0.12
COL11A2-201ENST00000341947 DUX4L4P0CJ87 422 aa15.8■□□□□ 0.12
COL11A2-201ENST00000341947 DUX4L5P0CJ88 424 aa15.8■□□□□ 0.12
COL11A2-201ENST00000341947 DUX4L6P0CJ89 424 aa15.8■□□□□ 0.12
COL11A2-201ENST00000341947 DUX4L7P0CJ90 424 aa15.8■□□□□ 0.12
COL11A2-201ENST00000341947 OXCT1P55809 520 aa15.8■□□□□ 0.12
COL11A2-201ENST00000341947 LRRC36Q1X8D7 754 aa15.8■□□□□ 0.12
COL11A2-201ENST00000341947 PAN2Q504Q3 1202 aaKnown RBP15.8■□□□□ 0.12
COL11A2-201ENST00000341947 MROH9Q5TGP6 573 aa15.8■□□□□ 0.12
COL11A2-201ENST00000341947 RIN2Q8WYP3 895 aaPredicted RBP15.8■□□□□ 0.12
COL11A2-201ENST00000341947 FRMD8P1Q9BZ68 369 aaPredicted RBP15.8■□□□□ 0.12
COL11A2-201ENST00000341947 DUX4Q9UBX2 424 aa15.8■□□□□ 0.12
COL11A2-201ENST00000341947 SCAF8Q9UPN6 1271 aaKnown RBP15.8■□□□□ 0.12
COL11A2-201ENST00000341947 URODP06132 367 aa15.8■□□□□ 0.12
COL11A2-201ENST00000341947 CDC16Q13042 620 aa15.8■□□□□ 0.12
COL11A2-201ENST00000341947 NR1I3Q14994 352 aa15.8■□□□□ 0.12
COL11A2-201ENST00000341947 EPC2Q52LR7 807 aa15.8■□□□□ 0.12
COL11A2-201ENST00000341947 KLF6Q99612 283 aaPredicted RBP15.8■□□□□ 0.12
COL11A2-201ENST00000341947 ECSITQ9BQ95 431 aa15.8■□□□□ 0.12
COL11A2-201ENST00000341947 VIPAS39Q9H9C1 493 aa15.8■□□□□ 0.12
COL11A2-201ENST00000341947 RBM12Q9NTZ6 932 aaKnown RBP15.8■□□□□ 0.12
COL11A2-201ENST00000341947 ALG6Q9Y672 507 aa15.8■□□□□ 0.12
COL11A2-201ENST00000341947 RAD51CO43502 376 aa15.8■□□□□ 0.12
COL11A2-201ENST00000341947 PSTPIP1O43586 416 aa15.8■□□□□ 0.12
COL11A2-201ENST00000341947 CHI3L1P36222 383 aaPredicted RBP15.8■□□□□ 0.12
COL11A2-201ENST00000341947 SLC16A1P53985 500 aa15.8■□□□□ 0.12
COL11A2-201ENST00000341947 XPO6Q96QU8 1125 aaKnown RBP15.8■□□□□ 0.12
COL11A2-201ENST00000341947 KDM6BO15054 1643 aa15.8■□□□□ 0.12
COL11A2-201ENST00000341947 NTSR2O95665 410 aa15.8■□□□□ 0.12
COL11A2-201ENST00000341947 CSF1RP07333 972 aa15.8■□□□□ 0.12
COL11A2-201ENST00000341947 TGM2P21980 687 aa15.8■□□□□ 0.12
COL11A2-201ENST00000341947 YY1P25490 414 aa15.8■□□□□ 0.12
COL11A2-201ENST00000341947 MAPK1P28482 360 aa15.8■□□□□ 0.12
COL11A2-201ENST00000341947 CCDC157Q569K6 752 aa15.8■□□□□ 0.12
COL11A2-201ENST00000341947 WLSQ5T9L3 541 aa15.8■□□□□ 0.12
COL11A2-201ENST00000341947 DENND5BQ6ZUT9 1274 aa15.8■□□□□ 0.12
COL11A2-201ENST00000341947 FBXO33Q7Z6M2 555 aa15.8■□□□□ 0.12
COL11A2-201ENST00000341947 UNC45BQ8IWX7 931 aa15.8■□□□□ 0.12
COL11A2-201ENST00000341947 VPS50Q96JG6 964 aa15.8■□□□□ 0.12
COL11A2-201ENST00000341947 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.8■□□□□ 0.12
COL11A2-201ENST00000341947 VPS26AO75436 327 aa15.8■□□□□ 0.12
COL11A2-201ENST00000341947 IYDQ6PHW0 289 aa15.8■□□□□ 0.12
COL11A2-201ENST00000341947 CDR2LQ86X02 465 aaPredicted RBP15.8■□□□□ 0.12
COL11A2-201ENST00000341947 DSEQ9UL01 958 aa15.8■□□□□ 0.12
COL11A2-201ENST00000341947 SPATA31A1Q5TZJ5 1347 aa15.8■□□□□ 0.12
COL11A2-201ENST00000341947 CROCC2H7BZ55 1655 aa15.79■□□□□ 0.12
COL11A2-201ENST00000341947 CYP11B2P19099 503 aa15.79■□□□□ 0.12
COL11A2-201ENST00000341947 COILP38432 576 aaPredicted RBP15.79■□□□□ 0.12
COL11A2-201ENST00000341947 RPL10AP62906 217 aaKnown RBP15.79■□□□□ 0.12
COL11A2-201ENST00000341947 ALDH6A1Q02252 535 aaKnown RBP15.79■□□□□ 0.12
COL11A2-201ENST00000341947 TBL3Q12788 808 aaKnown RBP15.79■□□□□ 0.12
COL11A2-201ENST00000341947 LAYNQ6UX15 382 aa15.79■□□□□ 0.12
COL11A2-201ENST00000341947 SYN2Q92777 582 aaPredicted RBP15.79■□□□□ 0.12
COL11A2-201ENST00000341947 RAD18Q9NS91 495 aa15.79■□□□□ 0.12
COL11A2-201ENST00000341947 ACO1P21399 889 aaKnown RBP15.79■□□□□ 0.12
COL11A2-201ENST00000341947 ZNF284Q2VY69 593 aa15.79■□□□□ 0.12
COL11A2-201ENST00000341947 ZNF438Q7Z4V0 828 aa15.79■□□□□ 0.12
COL11A2-201ENST00000341947 KIAA2013Q8IYS2 634 aa15.79■□□□□ 0.12
COL11A2-201ENST00000341947 RMND5AQ9H871 391 aa15.79■□□□□ 0.12
COL11A2-201ENST00000341947 FAM47E-STBD1D6RA91 191 aa15.79■□□□□ 0.12
COL11A2-201ENST00000341947 CAND2O75155 1236 aa15.79■□□□□ 0.12
COL11A2-201ENST00000341947 AVPR1AP37288 418 aa15.79■□□□□ 0.12
COL11A2-201ENST00000341947 GALNT4Q8N4A0 578 aa15.79■□□□□ 0.12
COL11A2-201ENST00000341947 PNMA8BQ9ULN7 279 aaPredicted RBP15.79■□□□□ 0.12
COL11A2-201ENST00000341947 V9GYQ6 96 aa15.79■□□□□ 0.12
COL11A2-201ENST00000341947 B3GAT3O94766 335 aa15.79■□□□□ 0.12
COL11A2-201ENST00000341947 TOMM70O94826 608 aa15.79■□□□□ 0.12
COL11A2-201ENST00000341947 HERC6Q8IVU3 1022 aa15.79■□□□□ 0.12
COL11A2-201ENST00000341947 ERP27Q96DN0 273 aa15.79■□□□□ 0.12
COL11A2-201ENST00000341947 YME1L1Q96TA2 773 aa15.79■□□□□ 0.12
COL11A2-201ENST00000341947 EPB41L4AQ9HCS5 686 aaPredicted RBP15.79■□□□□ 0.12
COL11A2-201ENST00000341947 GPR75-ASB3A0A0A6YYF3 556 aa15.79■□□□□ 0.12
COL11A2-201ENST00000341947 CYB561D2O14569 222 aa15.79■□□□□ 0.12
COL11A2-201ENST00000341947 OGTO15294 1046 aa15.79■□□□□ 0.12
COL11A2-201ENST00000341947 PLOD1Q02809 727 aaPredicted RBP15.79■□□□□ 0.12
COL11A2-201ENST00000341947 MKRN4PQ13434 485 aaPredicted RBP15.79■□□□□ 0.12
COL11A2-201ENST00000341947 KBTBD12Q3ZCT8 623 aa15.79■□□□□ 0.12
COL11A2-201ENST00000341947 CTXN3Q4LDR2 81 aa15.79■□□□□ 0.12
COL11A2-201ENST00000341947 DAB2IPQ5VWQ8 1189 aa15.79■□□□□ 0.12
COL11A2-201ENST00000341947 MPZL3Q6UWV2 235 aa15.79■□□□□ 0.12
COL11A2-201ENST00000341947 ADGRF2Q8IZF7 708 aa15.79■□□□□ 0.12
COL11A2-201ENST00000341947 PNKPQ96T60 521 aa15.79■□□□□ 0.12
COL11A2-201ENST00000341947 KCTD10Q9H3F6 313 aa15.79■□□□□ 0.12
COL11A2-201ENST00000341947 DYRK1BQ9Y463 629 aa15.79■□□□□ 0.12
COL11A2-201ENST00000341947 TMEM120BA0PK00 339 aa15.78■□□□□ 0.12
COL11A2-201ENST00000341947 RASSF9O75901 435 aa15.78■□□□□ 0.12
COL11A2-201ENST00000341947 RPLP2P05387 115 aaKnown RBP15.78■□□□□ 0.12
COL11A2-201ENST00000341947 GARTP22102 1010 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms