RNA–Protein interactions for RNA: ENST00000341398.6

NECTIN1-203, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-203ENST00000341398 RPP40O75818 363 aaKnown RBP13.97□□□□□ -0.17
NECTIN1-203ENST00000341398 AKAP3O75969 853 aa13.97□□□□□ -0.17
NECTIN1-203ENST00000341398 ARSAP15289 507 aa13.97□□□□□ -0.17
NECTIN1-203ENST00000341398 PFKLP17858 780 aa13.97□□□□□ -0.17
NECTIN1-203ENST00000341398 HDCP19113 662 aa13.97□□□□□ -0.17
NECTIN1-203ENST00000341398 GRIK1P39086 918 aa13.97□□□□□ -0.17
NECTIN1-203ENST00000341398 PPP3CCP48454 512 aa13.97□□□□□ -0.17
NECTIN1-203ENST00000341398 NASPP49321 788 aaPredicted RBP13.97□□□□□ -0.17
NECTIN1-203ENST00000341398 FSTL4Q6MZW2 842 aa13.97□□□□□ -0.17
NECTIN1-203ENST00000341398 WDR49Q8IV35 697 aa13.97□□□□□ -0.17
NECTIN1-203ENST00000341398 IQUBQ8NA54 791 aa13.97□□□□□ -0.17
NECTIN1-203ENST00000341398 C12orf50Q8NA57 414 aaPredicted RBP13.97□□□□□ -0.17
NECTIN1-203ENST00000341398 CXorf38Q8TB03 319 aa13.97□□□□□ -0.17
NECTIN1-203ENST00000341398 SPATA17Q96L03 361 aa13.97□□□□□ -0.17
NECTIN1-203ENST00000341398 CYP2S1Q96SQ9 504 aa13.97□□□□□ -0.17
NECTIN1-203ENST00000341398 PKMYT1Q99640 499 aa13.97□□□□□ -0.17
NECTIN1-203ENST00000341398 SYT15Q9BQS2 421 aa13.97□□□□□ -0.17
NECTIN1-203ENST00000341398 SNX25Q9H3E2 840 aa13.97□□□□□ -0.17
NECTIN1-203ENST00000341398 HSPBP1Q9NZL4 362 aa13.97□□□□□ -0.17
NECTIN1-203ENST00000341398 TRPM5Q9NZQ8 1165 aa13.97□□□□□ -0.17
NECTIN1-203ENST00000341398 SIX4Q9UIU6 781 aa13.97□□□□□ -0.17
NECTIN1-203ENST00000341398 MTMR6Q9Y217 621 aa13.97□□□□□ -0.17
NECTIN1-203ENST00000341398 A0A087X0B3 334 aa13.96□□□□□ -0.17
NECTIN1-203ENST00000341398 AXIN1O15169 862 aa13.96□□□□□ -0.17
NECTIN1-203ENST00000341398 SPTLC2O15270 562 aa13.96□□□□□ -0.17
NECTIN1-203ENST00000341398 RNF40O75150 1001 aa13.96□□□□□ -0.17
NECTIN1-203ENST00000341398 PPP6R2O75170 966 aa13.96□□□□□ -0.17
NECTIN1-203ENST00000341398 EGFP01133 1207 aa13.96□□□□□ -0.17
NECTIN1-203ENST00000341398 FAM163BP0C2L3 166 aa13.96□□□□□ -0.17
NECTIN1-203ENST00000341398 PDIA4P13667 645 aaKnown RBP13.96□□□□□ -0.17
NECTIN1-203ENST00000341398 TNNI1P19237 187 aa13.96□□□□□ -0.17
NECTIN1-203ENST00000341398 GJA4P35212 333 aa13.96□□□□□ -0.17
NECTIN1-203ENST00000341398 SNRPFP62306 86 aaKnown RBP13.96□□□□□ -0.17
NECTIN1-203ENST00000341398 ASIC1P78348 528 aa13.96□□□□□ -0.17
NECTIN1-203ENST00000341398 PSMD2Q13200 908 aa13.96□□□□□ -0.17
NECTIN1-203ENST00000341398 AASDHQ4L235 1098 aaPredicted RBP13.96□□□□□ -0.17
NECTIN1-203ENST00000341398 LMBRD2Q68DH5 695 aaPredicted RBP13.96□□□□□ -0.17
NECTIN1-203ENST00000341398 IL31Q6EBC2 164 aa13.96□□□□□ -0.17
NECTIN1-203ENST00000341398 OSTM1Q86WC4 334 aa13.96□□□□□ -0.17
NECTIN1-203ENST00000341398 LINC00301Q8NCQ3 95 aa13.96□□□□□ -0.17
NECTIN1-203ENST00000341398 STKLD1Q8NE28 680 aa13.96□□□□□ -0.17
NECTIN1-203ENST00000341398 CD101Q93033 1021 aa13.96□□□□□ -0.17
NECTIN1-203ENST00000341398 ACDQ96AP0 544 aa13.96□□□□□ -0.17
NECTIN1-203ENST00000341398 KBTBD4Q9NVX7 518 aa13.96□□□□□ -0.17
NECTIN1-203ENST00000341398 C2orf42Q9NWW7 574 aa13.96□□□□□ -0.17
NECTIN1-203ENST00000341398 OTOL1A6NHN0 477 aaPredicted RBP13.96□□□□□ -0.18
NECTIN1-203ENST00000341398 TRIM66O15016 1216 aa13.96□□□□□ -0.18
NECTIN1-203ENST00000341398 NFATC1O95644 943 aa13.96□□□□□ -0.18
NECTIN1-203ENST00000341398 PDGFRBP09619 1106 aa13.96□□□□□ -0.18
NECTIN1-203ENST00000341398 WARSP23381 471 aaKnown RBP13.96□□□□□ -0.18
NECTIN1-203ENST00000341398 BDNFP23560 247 aa13.96□□□□□ -0.18
NECTIN1-203ENST00000341398 GNL1P36915 607 aaPredicted RBP13.96□□□□□ -0.18
NECTIN1-203ENST00000341398 CYP27A1Q02318 531 aa13.96□□□□□ -0.18
NECTIN1-203ENST00000341398 ZNF77Q15935 545 aa13.96□□□□□ -0.18
NECTIN1-203ENST00000341398 DENND5BQ6ZUT9 1274 aa13.96□□□□□ -0.18
NECTIN1-203ENST00000341398 HS2ST1Q7LGA3 356 aa13.96□□□□□ -0.18
NECTIN1-203ENST00000341398 CBWD2Q8IUF1 395 aa13.96□□□□□ -0.18
NECTIN1-203ENST00000341398 ARL14EPQ8N8R7 260 aaPredicted RBP13.96□□□□□ -0.18
NECTIN1-203ENST00000341398 RDH13Q8NBN7 331 aa13.96□□□□□ -0.18
NECTIN1-203ENST00000341398 OR5B17Q8NGF7 314 aa13.96□□□□□ -0.18
NECTIN1-203ENST00000341398 ZNF507Q8TCN5 953 aa13.96□□□□□ -0.18
NECTIN1-203ENST00000341398 SH3RF2Q8TEC5 729 aa13.96□□□□□ -0.18
NECTIN1-203ENST00000341398 FGFBP2Q9BYJ0 223 aa13.96□□□□□ -0.18
NECTIN1-203ENST00000341398 TRIM9Q9C026 710 aa13.96□□□□□ -0.18
NECTIN1-203ENST00000341398 ARRDC1-AS1Q9H2J1 176 aa13.96□□□□□ -0.18
NECTIN1-203ENST00000341398 HELZP42694 1942 aaKnown RBP13.95□□□□□ -0.18
NECTIN1-203ENST00000341398 K7ELQ4 463 aaPredicted RBP13.95□□□□□ -0.18
NECTIN1-203ENST00000341398 CUTAO60888 179 aa13.95□□□□□ -0.18
NECTIN1-203ENST00000341398 ATP2C2O75185 946 aa13.95□□□□□ -0.18
NECTIN1-203ENST00000341398 TADA3O75528 432 aa13.95□□□□□ -0.18
NECTIN1-203ENST00000341398 ZNF806P0C7X5 589 aa13.95□□□□□ -0.18
NECTIN1-203ENST00000341398 DLATP10515 647 aaKnown RBP13.95□□□□□ -0.18
NECTIN1-203ENST00000341398 TCF3P15923 654 aa13.95□□□□□ -0.18
NECTIN1-203ENST00000341398 LMO2P25791 158 aa13.95□□□□□ -0.18
NECTIN1-203ENST00000341398 PXNP49023 591 aaPredicted RBP13.95□□□□□ -0.18
NECTIN1-203ENST00000341398 PSMC1P62191 440 aaKnown RBP13.95□□□□□ -0.18
NECTIN1-203ENST00000341398 TNNC1P63316 161 aa13.95□□□□□ -0.18
NECTIN1-203ENST00000341398 TRPC3Q13507 836 aa13.95□□□□□ -0.18
NECTIN1-203ENST00000341398 SNRNP35Q16560 246 aaKnown RBP13.95□□□□□ -0.18
NECTIN1-203ENST00000341398 EML3Q32P44 896 aa13.95□□□□□ -0.18
NECTIN1-203ENST00000341398 FAM26FQ5R3K3 315 aa13.95□□□□□ -0.18
NECTIN1-203ENST00000341398 SYT13Q7L8C5 426 aa13.95□□□□□ -0.18
NECTIN1-203ENST00000341398 TRAPPC11Q7Z392 1133 aa13.95□□□□□ -0.18
NECTIN1-203ENST00000341398 LIMS2Q7Z4I7 341 aa13.95□□□□□ -0.18
NECTIN1-203ENST00000341398 OR6B3Q8NGW1 331 aa13.95□□□□□ -0.18
NECTIN1-203ENST00000341398 RPLP0P6Q8NHW5 317 aa13.95□□□□□ -0.18
NECTIN1-203ENST00000341398 MYCBPAPQ8TBZ2 947 aa13.95□□□□□ -0.18
NECTIN1-203ENST00000341398 MYLPFQ96A32 169 aa13.95□□□□□ -0.18
NECTIN1-203ENST00000341398 DHX58Q96C10 678 aa13.95□□□□□ -0.18
NECTIN1-203ENST00000341398 CHFRQ96EP1 664 aa13.95□□□□□ -0.18
NECTIN1-203ENST00000341398 MAGEF1Q9HAY2 307 aa13.95□□□□□ -0.18
NECTIN1-203ENST00000341398 FOXD4L1Q9NU39 408 aa13.95□□□□□ -0.18
NECTIN1-203ENST00000341398 GCNT4Q9P109 453 aa13.95□□□□□ -0.18
NECTIN1-203ENST00000341398 CGNQ9P2M7 1197 aaKnown RBP13.95□□□□□ -0.18
NECTIN1-203ENST00000341398 TFIP11Q9UBB9 837 aaKnown RBP13.95□□□□□ -0.18
NECTIN1-203ENST00000341398 ARHGAP26Q9UNA1 814 aa13.95□□□□□ -0.18
NECTIN1-203ENST00000341398 PCDHGA5Q9Y5G8 931 aa13.95□□□□□ -0.18
NECTIN1-203ENST00000341398 WNT6Q9Y6F9 365 aa13.95□□□□□ -0.18
NECTIN1-203ENST00000341398 SPTBN2O15020 2390 aa13.94□□□□□ -0.18
NECTIN1-203ENST00000341398 PTPRDP23468 1912 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms