RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 UCMAQ8WVF2 138 aa15.89■□□□□ 0.13
BRAT1-201ENST00000340611 STK33Q9BYT3 514 aa15.89■□□□□ 0.13
BRAT1-201ENST00000340611 RPF1Q9H9Y2 349 aaKnown RBP15.89■□□□□ 0.13
BRAT1-201ENST00000340611 AIPL1Q9NZN9 384 aa15.89■□□□□ 0.13
BRAT1-201ENST00000340611 USH1CQ9Y6N9 552 aa15.89■□□□□ 0.13
BRAT1-201ENST00000340611 MEIS3P2A8K0S8 358 aa15.89■□□□□ 0.13
BRAT1-201ENST00000340611 CHRNA1P02708 482 aa15.89■□□□□ 0.13
BRAT1-201ENST00000340611 SOX5P35711 763 aa15.89■□□□□ 0.13
BRAT1-201ENST00000340611 ITGA7Q13683 1181 aa15.89■□□□□ 0.13
BRAT1-201ENST00000340611 GLYCTKQ8IVS8 523 aa15.89■□□□□ 0.13
BRAT1-201ENST00000340611 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.89■□□□□ 0.13
BRAT1-201ENST00000340611 P3H4Q92791 437 aa15.89■□□□□ 0.13
BRAT1-201ENST00000340611 KCNN1Q92952 543 aa15.89■□□□□ 0.13
BRAT1-201ENST00000340611 NDNQ99608 321 aa15.89■□□□□ 0.13
BRAT1-201ENST00000340611 NUB1Q9Y5A7 615 aa15.89■□□□□ 0.13
BRAT1-201ENST00000340611 CFAP73A6NFT4 308 aa15.88■□□□□ 0.13
BRAT1-201ENST00000340611 SGPL1O95470 568 aa15.88■□□□□ 0.13
BRAT1-201ENST00000340611 HOXC8P31273 242 aa15.88■□□□□ 0.13
BRAT1-201ENST00000340611 RAD23BP54727 409 aa15.88■□□□□ 0.13
BRAT1-201ENST00000340611 NCALDP61601 193 aa15.88■□□□□ 0.13
BRAT1-201ENST00000340611 FAM187BQ17R55 369 aa15.88■□□□□ 0.13
BRAT1-201ENST00000340611 SLC47A2Q86VL8 602 aa15.88■□□□□ 0.13
BRAT1-201ENST00000340611 TAX1BP1Q86VP1 789 aa15.88■□□□□ 0.13
BRAT1-201ENST00000340611 TEX9Q8N6V9 391 aa15.88■□□□□ 0.13
BRAT1-201ENST00000340611 TPCN2Q8NHX9 752 aa15.88■□□□□ 0.13
BRAT1-201ENST00000340611 NAGPAQ9UK23 515 aa15.88■□□□□ 0.13
BRAT1-201ENST00000340611 ASB3Q9Y575 518 aa15.88■□□□□ 0.13
BRAT1-201ENST00000340611 PAEPP09466 180 aa15.88■□□□□ 0.13
BRAT1-201ENST00000340611 CHN1P15882 459 aa15.88■□□□□ 0.13
BRAT1-201ENST00000340611 STAT1P42224 750 aa15.88■□□□□ 0.13
BRAT1-201ENST00000340611 NCOA4Q13772 614 aa15.88■□□□□ 0.13
BRAT1-201ENST00000340611 DAAM2Q86T65 1068 aa15.88■□□□□ 0.13
BRAT1-201ENST00000340611 RNF180Q86T96 592 aa15.88■□□□□ 0.13
BRAT1-201ENST00000340611 LRRC34Q8IZ02 419 aa15.88■□□□□ 0.13
BRAT1-201ENST00000340611 PXYLP1Q8TE99 480 aa15.88■□□□□ 0.13
BRAT1-201ENST00000340611 NT5C1BQ96P26 610 aa15.88■□□□□ 0.13
BRAT1-201ENST00000340611 CACNG4Q9UBN1 327 aa15.88■□□□□ 0.13
BRAT1-201ENST00000340611 CHORDC1Q9UHD1 332 aaPredicted RBP15.88■□□□□ 0.13
BRAT1-201ENST00000340611 COQ4Q9Y3A0 265 aa15.88■□□□□ 0.13
BRAT1-201ENST00000340611 LAMA3Q16787 3333 aa15.88■□□□□ 0.13
BRAT1-201ENST00000340611 PFDN1O60925 122 aa15.88■□□□□ 0.13
BRAT1-201ENST00000340611 KRT5P13647 590 aa15.88■□□□□ 0.13
BRAT1-201ENST00000340611 MSH2P43246 934 aa15.88■□□□□ 0.13
BRAT1-201ENST00000340611 CLDN10P78369 228 aa15.88■□□□□ 0.13
BRAT1-201ENST00000340611 POU5F1BQ06416 359 aa15.88■□□□□ 0.13
BRAT1-201ENST00000340611 AGO3Q9H9G7 860 aaKnown RBP15.88■□□□□ 0.13
BRAT1-201ENST00000340611 TAS2R14Q9NYV8 317 aa15.88■□□□□ 0.13
BRAT1-201ENST00000340611 NOD1Q9Y239 953 aa15.88■□□□□ 0.13
BRAT1-201ENST00000340611 MMEP08473 750 aa15.87■□□□□ 0.13
BRAT1-201ENST00000340611 TMEM191BP0C7N4 346 aa15.87■□□□□ 0.13
BRAT1-201ENST00000340611 DEUP1Q05D60 604 aa15.87■□□□□ 0.13
BRAT1-201ENST00000340611 ZNF394Q53GI3 561 aa15.87■□□□□ 0.13
BRAT1-201ENST00000340611 ERMARDQ5T6L9 678 aa15.87■□□□□ 0.13
BRAT1-201ENST00000340611 USP37Q86T82 979 aa15.87■□□□□ 0.13
BRAT1-201ENST00000340611 EIF1ADQ8N9N8 165 aaKnown RBP15.87■□□□□ 0.13
BRAT1-201ENST00000340611 DEFB118Q96PH6 123 aa15.87■□□□□ 0.13
BRAT1-201ENST00000340611 SAMD15Q9P1V8 674 aa15.87■□□□□ 0.13
BRAT1-201ENST00000340611 CAPN15O75808 1086 aa15.87■□□□□ 0.13
BRAT1-201ENST00000340611 FGGP02679 453 aa15.87■□□□□ 0.13
BRAT1-201ENST00000340611 RARAP10276 462 aa15.87■□□□□ 0.13
BRAT1-201ENST00000340611 CD58P19256 250 aa15.87■□□□□ 0.13
BRAT1-201ENST00000340611 MRPS35P82673 323 aaKnown RBP15.87■□□□□ 0.13
BRAT1-201ENST00000340611 ORC1Q13415 861 aa15.87■□□□□ 0.13
BRAT1-201ENST00000340611 UBAP2Q5T6F2 1119 aaKnown RBP15.87■□□□□ 0.13
BRAT1-201ENST00000340611 LNX1Q8TBB1 728 aaPredicted RBP15.87■□□□□ 0.13
BRAT1-201ENST00000340611 ZMAT2Q96NC0 199 aaKnown RBP15.87■□□□□ 0.13
BRAT1-201ENST00000340611 FAM129AQ9BZQ8 928 aa15.87■□□□□ 0.13
BRAT1-201ENST00000340611 NXF1Q9UBU9 619 aaKnown RBP15.87■□□□□ 0.13
BRAT1-201ENST00000340611 POLIQ9UNA4 740 aa15.87■□□□□ 0.13
BRAT1-201ENST00000340611 UTP11Q9Y3A2 253 aaKnown RBP15.87■□□□□ 0.13
BRAT1-201ENST00000340611 P4HA2O15460 535 aa15.86■□□□□ 0.13
BRAT1-201ENST00000340611 ALADP13716 330 aa15.86■□□□□ 0.13
BRAT1-201ENST00000340611 RAP1GAPP47736 663 aa15.86■□□□□ 0.13
BRAT1-201ENST00000340611 SESN3P58005 492 aa15.86■□□□□ 0.13
BRAT1-201ENST00000340611 MRPS6P82932 125 aaKnown RBP15.86■□□□□ 0.13
BRAT1-201ENST00000340611 KLC1Q07866 573 aa15.86■□□□□ 0.13
BRAT1-201ENST00000340611 FOXB2Q5VYV0 432 aa15.86■□□□□ 0.13
BRAT1-201ENST00000340611 SERINC5Q86VE9 423 aa15.86■□□□□ 0.13
BRAT1-201ENST00000340611 SLAIN1Q8ND83 568 aa15.86■□□□□ 0.13
BRAT1-201ENST00000340611 OLIG1Q8TAK6 271 aa15.86■□□□□ 0.13
BRAT1-201ENST00000340611 FMO2Q99518 471 aa15.86■□□□□ 0.13
BRAT1-201ENST00000340611 ADPGKQ9BRR6 497 aa15.86■□□□□ 0.13
BRAT1-201ENST00000340611 DDX3XO00571 662 aaKnown RBP eCLIP15.86■□□□□ 0.132e-6■□□□□ 10.2
BRAT1-201ENST00000340611 CES2O00748 559 aa15.86■□□□□ 0.13
BRAT1-201ENST00000340611 KIAA0391O15091 583 aaKnown RBP15.86■□□□□ 0.13
BRAT1-201ENST00000340611 ITGB3P05106 788 aa15.86■□□□□ 0.13
BRAT1-201ENST00000340611 WEE2P0C1S8 567 aa15.86■□□□□ 0.13
BRAT1-201ENST00000340611 MCF2P10911 925 aa15.86■□□□□ 0.13
BRAT1-201ENST00000340611 SCN1AP35498 2009 aa15.86■□□□□ 0.13
BRAT1-201ENST00000340611 AFF1P51825 1210 aaKnown RBP15.86■□□□□ 0.13
BRAT1-201ENST00000340611 NOP14P78316 857 aaKnown RBP15.86■□□□□ 0.13
BRAT1-201ENST00000340611 IFI16Q16666 785 aaKnown RBP15.86■□□□□ 0.13
BRAT1-201ENST00000340611 C1orf127Q8N9H9 656 aa15.86■□□□□ 0.13
BRAT1-201ENST00000340611 U2AF1L4Q8WU68 220 aaKnown RBP15.86■□□□□ 0.13
BRAT1-201ENST00000340611 C18orf25Q96B23 403 aaPredicted RBP15.86■□□□□ 0.13
BRAT1-201ENST00000340611 C1orf112Q9NSG2 853 aa15.86■□□□□ 0.13
BRAT1-201ENST00000340611 A0A1W2PQ45 241 aaPredicted RBP15.85■□□□□ 0.13
BRAT1-201ENST00000340611 A0A1W2PQY0 241 aa15.85■□□□□ 0.13
BRAT1-201ENST00000340611 CCDC188H7C350 402 aa15.85■□□□□ 0.13
BRAT1-201ENST00000340611 PPEF2O14830 753 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms