RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 DDR2Q16832 855 aa16.42■□□□□ 0.22
VAPA-201ENST00000340541 ZNF528Q3MIS6 628 aa16.42■□□□□ 0.22
VAPA-201ENST00000340541 CBWD6Q4V339 395 aa16.42■□□□□ 0.22
VAPA-201ENST00000340541 CBWD3Q5JTY5 395 aa16.42■□□□□ 0.22
VAPA-201ENST00000340541 CBWD5Q5RIA9 395 aa16.42■□□□□ 0.22
VAPA-201ENST00000340541 SDHAF4Q5VUM1 108 aa16.42■□□□□ 0.22
VAPA-201ENST00000340541 FILIP1Q7Z7B0 1213 aa16.42■□□□□ 0.22
VAPA-201ENST00000340541 ITIH5Q86UX2 942 aa16.42■□□□□ 0.22
VAPA-201ENST00000340541 SPATA2LQ8IUW3 424 aaPredicted RBP16.42■□□□□ 0.22
VAPA-201ENST00000340541 STKLD1Q8NE28 680 aa16.42■□□□□ 0.22
VAPA-201ENST00000340541 SLC35C1Q96A29 364 aa16.42■□□□□ 0.22
VAPA-201ENST00000340541 MED15Q96RN5 788 aa16.42■□□□□ 0.22
VAPA-201ENST00000340541 BCO2Q9BYV7 579 aa16.42■□□□□ 0.22
VAPA-201ENST00000340541 A0A1W2PRU2 124 aa16.41■□□□□ 0.22
VAPA-201ENST00000340541 BICDL2A1A5D9 508 aa16.41■□□□□ 0.22
VAPA-201ENST00000340541 A8MXQ7 604 aa16.41■□□□□ 0.22
VAPA-201ENST00000340541 NCAM2O15394 837 aa16.41■□□□□ 0.22
VAPA-201ENST00000340541 STX17P56962 302 aa16.41■□□□□ 0.22
VAPA-201ENST00000340541 NOP14P78316 857 aaKnown RBP16.41■□□□□ 0.22
VAPA-201ENST00000340541 PAK1Q13153 545 aa16.41■□□□□ 0.22
VAPA-201ENST00000340541 MAPRE1Q15691 268 aaKnown RBP16.41■□□□□ 0.22
VAPA-201ENST00000340541 MDH1BQ5I0G3 518 aa16.41■□□□□ 0.22
VAPA-201ENST00000340541 FAM78AQ5JUQ0 283 aa16.41■□□□□ 0.22
VAPA-201ENST00000340541 STXBP5Q5T5C0 1151 aa16.41■□□□□ 0.22
VAPA-201ENST00000340541 C4orf50Q6ZRC1 276 aa16.41■□□□□ 0.22
VAPA-201ENST00000340541 TMEM150AQ86TG1 271 aa16.41■□□□□ 0.22
VAPA-201ENST00000340541 FAM200AQ8TCP9 573 aa16.41■□□□□ 0.22
VAPA-201ENST00000340541 ELSPBP1Q96BH3 223 aa16.41■□□□□ 0.22
VAPA-201ENST00000340541 ASB16Q96NS5 453 aa16.41■□□□□ 0.22
VAPA-201ENST00000340541 GBP4Q96PP9 640 aa16.41■□□□□ 0.22
VAPA-201ENST00000340541 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.41■□□□□ 0.221e-7■■■■□ 22.7
VAPA-201ENST00000340541 TMEM30AQ9NV96 361 aa16.41■□□□□ 0.22
VAPA-201ENST00000340541 HMGXB4Q9UGU5 601 aa16.41■□□□□ 0.22
VAPA-201ENST00000340541 ARMCX3Q9UH62 379 aaPredicted RBP16.41■□□□□ 0.22
VAPA-201ENST00000340541 FBXO4Q9UKT5 387 aa16.41■□□□□ 0.22
VAPA-201ENST00000340541 COQ4Q9Y3A0 265 aa16.41■□□□□ 0.22
VAPA-201ENST00000340541 ZNF292O60281 2723 aa16.41■□□□□ 0.22
VAPA-201ENST00000340541 GVINP1Q7Z2Y8 2422 aa16.4■□□□□ 0.22
VAPA-201ENST00000340541 STX10O60499 249 aa16.4■□□□□ 0.22
VAPA-201ENST00000340541 NOL4O94818 638 aa16.4■□□□□ 0.22
VAPA-201ENST00000340541 P4HA1P13674 534 aa16.4■□□□□ 0.22
VAPA-201ENST00000340541 GLULP15104 373 aa16.4■□□□□ 0.22
VAPA-201ENST00000340541 BDNFP23560 247 aa16.4■□□□□ 0.22
VAPA-201ENST00000340541 GABRR2P28476 465 aa16.4■□□□□ 0.22
VAPA-201ENST00000340541 ID4P47928 161 aa16.4■□□□□ 0.22
VAPA-201ENST00000340541 CACNA2D1P54289 1103 aa16.4■□□□□ 0.22
VAPA-201ENST00000340541 RPL10AP62906 217 aaKnown RBP16.4■□□□□ 0.22
VAPA-201ENST00000340541 INCA1Q0VD86 236 aa16.4■□□□□ 0.22
VAPA-201ENST00000340541 DCAF17Q5H9S7 520 aaPredicted RBP16.4■□□□□ 0.22
VAPA-201ENST00000340541 TANGO2Q6ICL3 276 aa16.4■□□□□ 0.22
VAPA-201ENST00000340541 VSTM1Q6UX27 236 aa16.4■□□□□ 0.22
VAPA-201ENST00000340541 B3GALNT2Q8NCR0 500 aa16.4■□□□□ 0.22
VAPA-201ENST00000340541 FBXL13Q8NEE6 735 aa16.4■□□□□ 0.22
VAPA-201ENST00000340541 GPT2Q8TD30 523 aa16.4■□□□□ 0.22
VAPA-201ENST00000340541 KXD1Q9BQD3 176 aa16.4■□□□□ 0.22
VAPA-201ENST00000340541 B3GNT5Q9BYG0 378 aa16.4■□□□□ 0.22
VAPA-201ENST00000340541 PLA2G2FQ9BZM2 168 aa16.4■□□□□ 0.22
VAPA-201ENST00000340541 FOXQ1Q9C009 403 aa16.4■□□□□ 0.22
VAPA-201ENST00000340541 NUP62CLQ9H1M0 184 aa16.4■□□□□ 0.22
VAPA-201ENST00000340541 METTL14Q9HCE5 456 aaKnown RBP16.4■□□□□ 0.22
VAPA-201ENST00000340541 MAGEC2Q9UBF1 373 aaPredicted RBP16.4■□□□□ 0.22
VAPA-201ENST00000340541 MRPS17Q9Y2R5 130 aaKnown RBP16.4■□□□□ 0.22
VAPA-201ENST00000340541 WDR87Q6ZQQ6 2873 aa16.4■□□□□ 0.22
VAPA-201ENST00000340541 FAM170BA6NMN3 283 aa16.39■□□□□ 0.21
VAPA-201ENST00000340541 SLC38A8A6NNN8 435 aa16.39■□□□□ 0.21
VAPA-201ENST00000340541 FGF19O95750 216 aa16.39■□□□□ 0.21
VAPA-201ENST00000340541 RPS9P46781 194 aaKnown RBP16.39■□□□□ 0.21
VAPA-201ENST00000340541 NDST1P52848 882 aa16.39■□□□□ 0.21
VAPA-201ENST00000340541 CYP27A1Q02318 531 aa16.39■□□□□ 0.21
VAPA-201ENST00000340541 TCERG1LQ5VWI1 586 aa16.39■□□□□ 0.21
VAPA-201ENST00000340541 PAQR9Q6ZVX9 377 aa16.39■□□□□ 0.21
VAPA-201ENST00000340541 DNASE1L2Q92874 299 aa16.39■□□□□ 0.21
VAPA-201ENST00000340541 SMARCD2Q92925 531 aa16.39■□□□□ 0.21
VAPA-201ENST00000340541 CLDN23Q96B33 292 aa16.39■□□□□ 0.21
VAPA-201ENST00000340541 MYRFLQ96LU7 910 aa16.39■□□□□ 0.21
VAPA-201ENST00000340541 TWNKQ96RR1 684 aa16.39■□□□□ 0.21
VAPA-201ENST00000340541 IMPG2Q9BZV3 1241 aa16.39■□□□□ 0.21
VAPA-201ENST00000340541 ZNF518BQ9C0D4 1074 aa16.39■□□□□ 0.21
VAPA-201ENST00000340541 NIF3L1Q9GZT8 377 aa16.39■□□□□ 0.21
VAPA-201ENST00000340541 CYP3A43Q9HB55 503 aa16.39■□□□□ 0.21
VAPA-201ENST00000340541 TRPV4Q9HBA0 871 aa16.39■□□□□ 0.21
VAPA-201ENST00000340541 TRPV5Q9NQA5 729 aa16.39■□□□□ 0.21
VAPA-201ENST00000340541 RAB20Q9NX57 234 aa16.39■□□□□ 0.21
VAPA-201ENST00000340541 NUP210Q8TEM1 1887 aaPredicted RBP16.39■□□□□ 0.21
VAPA-201ENST00000340541 NCANO14594 1321 aa16.39■□□□□ 0.21
VAPA-201ENST00000340541 FANCMQ8IYD8 2048 aa16.38■□□□□ 0.21
VAPA-201ENST00000340541 CLDN5O00501 218 aa16.38■□□□□ 0.21
VAPA-201ENST00000340541 LAMTOR5O43504 91 aa16.38■□□□□ 0.21
VAPA-201ENST00000340541 TADA3O75528 432 aa16.38■□□□□ 0.21
VAPA-201ENST00000340541 CLSTN1O94985 981 aa16.38■□□□□ 0.21
VAPA-201ENST00000340541 F11P03951 625 aa16.38■□□□□ 0.21
VAPA-201ENST00000340541 CSH1P0DML2 217 aa16.38■□□□□ 0.21
VAPA-201ENST00000340541 CSH2P0DML3 217 aa16.38■□□□□ 0.21
VAPA-201ENST00000340541 MARSP56192 900 aaKnown RBP16.38■□□□□ 0.21
VAPA-201ENST00000340541 NLRP12P59046 1061 aa16.38■□□□□ 0.21
VAPA-201ENST00000340541 CYP4F8P98187 520 aa16.38■□□□□ 0.21
VAPA-201ENST00000340541 ORC1Q13415 861 aa16.38■□□□□ 0.21
VAPA-201ENST00000340541 UBXN2BQ14CS0 331 aa16.38■□□□□ 0.21
VAPA-201ENST00000340541 ZNF852Q6ZMS4 543 aa16.38■□□□□ 0.21
VAPA-201ENST00000340541 ACOT1Q86TX2 421 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms