RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 PTMSP20962 102 aa20.39■□□□□ 0.85
SYNE4-202ENST00000340477 DDX6P26196 483 aaKnown RBP eCLIP20.39■□□□□ 0.85
SYNE4-202ENST00000340477 ORC1Q13415 861 aa20.39■□□□□ 0.85
SYNE4-202ENST00000340477 CUL2Q13617 745 aa20.39■□□□□ 0.85
SYNE4-202ENST00000340477 GPR158Q5T848 1215 aa20.39■□□□□ 0.85
SYNE4-202ENST00000340477 DENND5BQ6ZUT9 1274 aa20.39■□□□□ 0.85
SYNE4-202ENST00000340477 GAREM2Q75VX8 874 aa20.39■□□□□ 0.85
SYNE4-202ENST00000340477 CRYBG2Q8N1P7 616 aa20.39■□□□□ 0.85
SYNE4-202ENST00000340477 SLC44A3Q8N4M1 653 aa20.39■□□□□ 0.85
SYNE4-202ENST00000340477 ZSCAN18Q8TBC5 510 aaPredicted RBP20.39■□□□□ 0.85
SYNE4-202ENST00000340477 E2F7Q96AV8 911 aa20.39■□□□□ 0.85
SYNE4-202ENST00000340477 KXD1Q9BQD3 176 aa20.39■□□□□ 0.85
SYNE4-202ENST00000340477 ZNF518BQ9C0D4 1074 aa20.39■□□□□ 0.85
SYNE4-202ENST00000340477 THAP9Q9H5L6 903 aa20.39■□□□□ 0.85
SYNE4-202ENST00000340477 DMAP1Q9NPF5 467 aaPredicted RBP20.39■□□□□ 0.85
SYNE4-202ENST00000340477 KRT82Q9NSB4 513 aa20.39■□□□□ 0.85
SYNE4-202ENST00000340477 CISHQ9NSE2 258 aa20.39■□□□□ 0.85
SYNE4-202ENST00000340477 ANO10Q9NW15 660 aa20.39■□□□□ 0.85
SYNE4-202ENST00000340477 HMGXB4Q9UGU5 601 aa20.39■□□□□ 0.85
SYNE4-202ENST00000340477 DENND4CQ5VZ89 1909 aa20.38■□□□□ 0.85
SYNE4-202ENST00000340477 PRR33A8MZF0 331 aa20.38■□□□□ 0.85
SYNE4-202ENST00000340477 F8VP50 259 aa20.38■□□□□ 0.85
SYNE4-202ENST00000340477 DPYSL4O14531 572 aa20.38■□□□□ 0.85
SYNE4-202ENST00000340477 MOSPD3O75425 235 aa20.38■□□□□ 0.85
SYNE4-202ENST00000340477 STX1AQ16623 288 aa20.38■□□□□ 0.85
SYNE4-202ENST00000340477 FAM78AQ5JUQ0 283 aa20.38■□□□□ 0.85
SYNE4-202ENST00000340477 RBM43Q6ZSC3 357 aaKnown RBP20.38■□□□□ 0.85
SYNE4-202ENST00000340477 ELSPBP1Q96BH3 223 aa20.38■□□□□ 0.85
SYNE4-202ENST00000340477 ASB16Q96NS5 453 aa20.38■□□□□ 0.85
SYNE4-202ENST00000340477 FAM49BQ9NUQ9 324 aa20.38■□□□□ 0.85
SYNE4-202ENST00000340477 OBSL1O75147 1896 aa20.38■□□□□ 0.85
SYNE4-202ENST00000340477 GREB1Q4ZG55 1949 aa20.37■□□□□ 0.85
SYNE4-202ENST00000340477 CLDN5O00501 218 aa20.37■□□□□ 0.85
SYNE4-202ENST00000340477 AP1G2O75843 785 aa20.37■□□□□ 0.85
SYNE4-202ENST00000340477 FAM200BP0CF97 657 aa20.37■□□□□ 0.85
SYNE4-202ENST00000340477 CCDC130P13994 396 aa20.37■□□□□ 0.85
SYNE4-202ENST00000340477 HMGA1P17096 107 aaKnown RBP20.37■□□□□ 0.85
SYNE4-202ENST00000340477 RFX1P22670 979 aa20.37■□□□□ 0.85
SYNE4-202ENST00000340477 CYP4F8P98187 520 aa20.37■□□□□ 0.85
SYNE4-202ENST00000340477 LRMPQ12912 555 aa20.37■□□□□ 0.85
SYNE4-202ENST00000340477 STKLD1Q8NE28 680 aa20.37■□□□□ 0.85
SYNE4-202ENST00000340477 ST13P5Q8NFI4 369 aaPredicted RBP20.37■□□□□ 0.85
SYNE4-202ENST00000340477 SLC2A14Q8TDB8 520 aa20.37■□□□□ 0.85
SYNE4-202ENST00000340477 TATDN2Q93075 761 aa20.37■□□□□ 0.85
SYNE4-202ENST00000340477 MYRFLQ96LU7 910 aa20.37■□□□□ 0.85
SYNE4-202ENST00000340477 TASP1Q9H6P5 420 aa20.37■□□□□ 0.85
SYNE4-202ENST00000340477 IL21Q9HBE4 155 aa20.37■□□□□ 0.85
SYNE4-202ENST00000340477 ZNF638Q14966 1978 aaKnown RBP20.37■□□□□ 0.85
SYNE4-202ENST00000340477 SOBPA7XYQ1 873 aa20.36■□□□□ 0.85
SYNE4-202ENST00000340477 LRRN2O75325 713 aa20.36■□□□□ 0.85
SYNE4-202ENST00000340477 RTN3O95197 1032 aaPredicted RBP20.36■□□□□ 0.85
SYNE4-202ENST00000340477 ADORA2BP29275 332 aa20.36■□□□□ 0.85
SYNE4-202ENST00000340477 AVPR1AP37288 418 aa20.36■□□□□ 0.85
SYNE4-202ENST00000340477 PDE6CP51160 858 aa20.36■□□□□ 0.85
SYNE4-202ENST00000340477 PFKPQ01813 784 aa20.36■□□□□ 0.85
SYNE4-202ENST00000340477 ZNF394Q53GI3 561 aa20.36■□□□□ 0.85
SYNE4-202ENST00000340477 SUGP1Q8IWZ8 645 aaKnown RBP20.36■□□□□ 0.85
SYNE4-202ENST00000340477 YAF2Q8IY57 180 aa20.36■□□□□ 0.85
SYNE4-202ENST00000340477 FUKQ8N0W3 1084 aa20.36■□□□□ 0.85
SYNE4-202ENST00000340477 PPM1KQ8N3J5 372 aa20.36■□□□□ 0.85
SYNE4-202ENST00000340477 HEXIM2Q96MH2 286 aaKnown RBP20.36■□□□□ 0.85
SYNE4-202ENST00000340477 SLITRK1Q96PX8 696 aa20.36■□□□□ 0.85
SYNE4-202ENST00000340477 ARID3AQ99856 593 aa20.36■□□□□ 0.85
SYNE4-202ENST00000340477 MFSD1Q9H3U5 465 aa20.36■□□□□ 0.85
SYNE4-202ENST00000340477 SMOC2Q9H3U7 446 aa20.36■□□□□ 0.85
SYNE4-202ENST00000340477 GCNT4Q9P109 453 aa20.36■□□□□ 0.85
SYNE4-202ENST00000340477 NARSO43776 548 aaKnown RBP20.35■□□□□ 0.85
SYNE4-202ENST00000340477 CFHP08603 1231 aa20.35■□□□□ 0.85
SYNE4-202ENST00000340477 IFRD2Q12894 506 aaPredicted RBP20.35■□□□□ 0.85
SYNE4-202ENST00000340477 STXBP5Q5T5C0 1151 aa20.35■□□□□ 0.85
SYNE4-202ENST00000340477 TANGO2Q6ICL3 276 aa20.35■□□□□ 0.85
SYNE4-202ENST00000340477 C12orf29Q8N999 325 aa20.35■□□□□ 0.85
SYNE4-202ENST00000340477 DEPDC1BQ8WUY9 529 aa20.35■□□□□ 0.85
SYNE4-202ENST00000340477 PBXIP1Q96AQ6 731 aa20.35■□□□□ 0.85
SYNE4-202ENST00000340477 CYFIP2Q96F07 1278 aa20.35■□□□□ 0.85
SYNE4-202ENST00000340477 TMEM176AQ96HP8 235 aa20.35■□□□□ 0.85
SYNE4-202ENST00000340477 ZSWIM3Q96MP5 696 aa20.35■□□□□ 0.85
SYNE4-202ENST00000340477 TWNKQ96RR1 684 aa20.35■□□□□ 0.85
SYNE4-202ENST00000340477 TRPV4Q9HBA0 871 aa20.35■□□□□ 0.85
SYNE4-202ENST00000340477 SLC2A4RGQ9NR83 387 aa20.35■□□□□ 0.85
SYNE4-202ENST00000340477 TRPM5Q9NZQ8 1165 aa20.35■□□□□ 0.85
SYNE4-202ENST00000340477 TECTAO75443 2155 aa20.35■□□□□ 0.85
SYNE4-202ENST00000340477 F11P03951 625 aa20.34■□□□□ 0.85
SYNE4-202ENST00000340477 TPM2P07951 284 aa20.34■□□□□ 0.85
SYNE4-202ENST00000340477 PRKCSHP14314 528 aaPredicted RBP20.34■□□□□ 0.85
SYNE4-202ENST00000340477 PPP3CCP48454 512 aa20.34■□□□□ 0.85
SYNE4-202ENST00000340477 SLC8A3P57103 927 aa20.34■□□□□ 0.85
SYNE4-202ENST00000340477 MAN2A1Q16706 1144 aa20.34■□□□□ 0.85
SYNE4-202ENST00000340477 NUP93Q8N1F7 819 aa20.34■□□□□ 0.85
SYNE4-202ENST00000340477 EHBP1Q8NDI1 1231 aa20.34■□□□□ 0.85
SYNE4-202ENST00000340477 PDZD8Q8NEN9 1154 aa20.34■□□□□ 0.85
SYNE4-202ENST00000340477 FAM81BQ96LP2 452 aa20.34■□□□□ 0.85
SYNE4-202ENST00000340477 MED15Q96RN5 788 aa20.34■□□□□ 0.85
SYNE4-202ENST00000340477 HNRNPABQ99729 332 aaKnown RBP20.34■□□□□ 0.85
SYNE4-202ENST00000340477 LRFN3Q9BTN0 628 aa20.34■□□□□ 0.85
SYNE4-202ENST00000340477 TRMT61BQ9BVS5 477 aaKnown RBP20.34■□□□□ 0.85
SYNE4-202ENST00000340477 INTS2Q9H0H0 1204 aaKnown RBP20.34■□□□□ 0.85
SYNE4-202ENST00000340477 TRPC7Q9HCX4 862 aa20.34■□□□□ 0.85
SYNE4-202ENST00000340477 C11orf16Q9NQ32 467 aa20.34■□□□□ 0.85
SYNE4-202ENST00000340477 WNT16Q9UBV4 365 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms