RNA–Protein interactions for RNA: ENST00000340384.4

TUBB4B-201, Transcript of tubulin beta 4B class IVb, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB4B, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-201ENST00000340384 KCNE1P15382 129 aa16.04■□□□□ 0.16
TUBB4B-201ENST00000340384 IGFBP6P24592 240 aaPredicted RBP16.04■□□□□ 0.16
TUBB4B-201ENST00000340384 FNTAP49354 379 aa16.04■□□□□ 0.16
TUBB4B-201ENST00000340384 SOX4Q06945 474 aaPredicted RBP16.04■□□□□ 0.16
TUBB4B-201ENST00000340384 STILQ15468 1287 aa16.04■□□□□ 0.16
TUBB4B-201ENST00000340384 CYP1B1Q16678 543 aa16.04■□□□□ 0.16
TUBB4B-201ENST00000340384 PSRC1Q6PGN9 363 aaPredicted RBP16.04■□□□□ 0.16
TUBB4B-201ENST00000340384 NPAS4Q8IUM7 802 aa16.04■□□□□ 0.16
TUBB4B-201ENST00000340384 C1orf131Q8NDD1 294 aaKnown RBP16.04■□□□□ 0.16
TUBB4B-201ENST00000340384 SEC14L1Q92503 715 aa16.04■□□□□ 0.16
TUBB4B-201ENST00000340384 MAGOHBQ96A72 148 aaKnown RBP16.04■□□□□ 0.16
TUBB4B-201ENST00000340384 C18orf25Q96B23 403 aaPredicted RBP16.04■□□□□ 0.16
TUBB4B-201ENST00000340384 PGBD4Q96DM1 585 aa16.04■□□□□ 0.16
TUBB4B-201ENST00000340384 TMEM176AQ96HP8 235 aa16.04■□□□□ 0.16
TUBB4B-201ENST00000340384 PPP1R10Q96QC0 940 aaKnown RBP16.04■□□□□ 0.16
TUBB4B-201ENST00000340384 MIS12Q9H081 205 aa16.04■□□□□ 0.16
TUBB4B-201ENST00000340384 RC3H2Q9HBD1 1191 aaKnown RBP16.04■□□□□ 0.16
TUBB4B-201ENST00000340384 PCYOX1Q9UHG3 505 aa16.04■□□□□ 0.16
TUBB4B-201ENST00000340384 PCDHB7Q9Y5E2 793 aa16.04■□□□□ 0.16
TUBB4B-201ENST00000340384 PTPRSQ13332 1948 aa16.04■□□□□ 0.16
TUBB4B-201ENST00000340384 ESYT3A0FGR9 886 aa16.03■□□□□ 0.16
TUBB4B-201ENST00000340384 TTI1O43156 1089 aa16.03■□□□□ 0.16
TUBB4B-201ENST00000340384 CILPO75339 1184 aa16.03■□□□□ 0.16
TUBB4B-201ENST00000340384 DGKIO75912 1065 aa16.03■□□□□ 0.16
TUBB4B-201ENST00000340384 UPP2O95045 317 aa16.03■□□□□ 0.16
TUBB4B-201ENST00000340384 CFHP08603 1231 aa16.03■□□□□ 0.16
TUBB4B-201ENST00000340384 VDRP11473 427 aa16.03■□□□□ 0.16
TUBB4B-201ENST00000340384 SCNN1GP51170 649 aa16.03■□□□□ 0.16
TUBB4B-201ENST00000340384 GUCY2FP51841 1108 aa16.03■□□□□ 0.16
TUBB4B-201ENST00000340384 RAD23BP54727 409 aa16.03■□□□□ 0.16
TUBB4B-201ENST00000340384 PIGHQ14442 188 aaPredicted RBP16.03■□□□□ 0.16
TUBB4B-201ENST00000340384 SHHQ15465 462 aa16.03■□□□□ 0.16
TUBB4B-201ENST00000340384 DCUN1D2Q6PH85 259 aa16.03■□□□□ 0.16
TUBB4B-201ENST00000340384 C12orf50Q8NA57 414 aaPredicted RBP16.03■□□□□ 0.16
TUBB4B-201ENST00000340384 HINFPQ9BQA5 517 aa16.03■□□□□ 0.16
TUBB4B-201ENST00000340384 FAM129AQ9BZQ8 928 aa16.03■□□□□ 0.16
TUBB4B-201ENST00000340384 HCSTQ9UBK5 93 aa16.03■□□□□ 0.16
TUBB4B-201ENST00000340384 FEZ2Q9UHY8 353 aaPredicted RBP16.03■□□□□ 0.16
TUBB4B-201ENST00000340384 H3BQF6 201 aa16.02■□□□□ 0.16
TUBB4B-201ENST00000340384 FSCN2O14926 492 aa16.02■□□□□ 0.16
TUBB4B-201ENST00000340384 EFCAB14O75071 495 aa16.02■□□□□ 0.16
TUBB4B-201ENST00000340384 DRG2P55039 364 aaKnown RBP16.02■□□□□ 0.16
TUBB4B-201ENST00000340384 GSCP56915 257 aaPredicted RBP16.02■□□□□ 0.16
TUBB4B-201ENST00000340384 INCA1Q0VD86 236 aa16.02■□□□□ 0.16
TUBB4B-201ENST00000340384 MTMR3Q13615 1198 aa16.02■□□□□ 0.16
TUBB4B-201ENST00000340384 CFAP58Q5T655 872 aa16.02■□□□□ 0.16
TUBB4B-201ENST00000340384 KATNAL2Q8IYT4 538 aa16.02■□□□□ 0.16
TUBB4B-201ENST00000340384 LRRC52Q8N7C0 313 aa16.02■□□□□ 0.16
TUBB4B-201ENST00000340384 C3orf20Q8ND61 904 aa16.02■□□□□ 0.16
TUBB4B-201ENST00000340384 ZNF689Q96CS4 500 aaPredicted RBP16.02■□□□□ 0.16
TUBB4B-201ENST00000340384 GDAP1L1Q96MZ0 367 aa16.02■□□□□ 0.16
TUBB4B-201ENST00000340384 ERP44Q9BS26 406 aa16.02■□□□□ 0.16
TUBB4B-201ENST00000340384 CACNG4Q9UBN1 327 aa16.02■□□□□ 0.16
TUBB4B-201ENST00000340384 TUBGCP4Q9UGJ1 667 aa16.02■□□□□ 0.16
TUBB4B-201ENST00000340384 BARX2Q9UMQ3 279 aaPredicted RBP16.02■□□□□ 0.16
TUBB4B-201ENST00000340384 TRIP11Q15643 1979 aa16.02■□□□□ 0.16
TUBB4B-201ENST00000340384 LAMA3Q16787 3333 aa16.02■□□□□ 0.16
TUBB4B-201ENST00000340384 PDCD11Q14690 1871 aaKnown RBP16.02■□□□□ 0.15
TUBB4B-201ENST00000340384 TMEM191CA6NGB0 347 aa16.01■□□□□ 0.15
TUBB4B-201ENST00000340384 ZSCAN5CA6NGD5 496 aaPredicted RBP16.01■□□□□ 0.15
TUBB4B-201ENST00000340384 GOLGA8KD6RF30 607 aa16.01■□□□□ 0.15
TUBB4B-201ENST00000340384 DDHD2O94830 711 aa16.01■□□□□ 0.15
TUBB4B-201ENST00000340384 POMCP01189 267 aa16.01■□□□□ 0.15
TUBB4B-201ENST00000340384 RAP1GAPP47736 663 aa16.01■□□□□ 0.15
TUBB4B-201ENST00000340384 TERF2Q15554 542 aa16.01■□□□□ 0.15
TUBB4B-201ENST00000340384 SGO2Q562F6 1265 aa16.01■□□□□ 0.15
TUBB4B-201ENST00000340384 LRRC38Q5VT99 294 aa16.01■□□□□ 0.15
TUBB4B-201ENST00000340384 FAM117BQ6P1L5 589 aa16.01■□□□□ 0.15
TUBB4B-201ENST00000340384 CCDC137Q6PK04 289 aaKnown RBP16.01■□□□□ 0.15
TUBB4B-201ENST00000340384 ADAT2Q7Z6V5 191 aaKnown RBP16.01■□□□□ 0.15
TUBB4B-201ENST00000340384 ZNF280BQ86YH2 543 aa16.01■□□□□ 0.15
TUBB4B-201ENST00000340384 PRELID2Q8N945 189 aa16.01■□□□□ 0.15
TUBB4B-201ENST00000340384 EXD1Q8NHP7 514 aa16.01■□□□□ 0.15
TUBB4B-201ENST00000340384 GRK7Q8WTQ7 553 aa16.01■□□□□ 0.15
TUBB4B-201ENST00000340384 TFAP2BQ92481 460 aa16.01■□□□□ 0.15
TUBB4B-201ENST00000340384 RBM41Q96IZ5 413 aaKnown RBP16.01■□□□□ 0.15
TUBB4B-201ENST00000340384 SMYD3Q9H7B4 428 aa16.01■□□□□ 0.15
TUBB4B-201ENST00000340384 GOLGA2P5Q9HBQ8 144 aa16.01■□□□□ 0.15
TUBB4B-201ENST00000340384 UBN1Q9NPG3 1134 aa16.01■□□□□ 0.15
TUBB4B-201ENST00000340384 INPP5FQ9Y2H2 1132 aa16.01■□□□□ 0.15
TUBB4B-201ENST00000340384 ZBBXA8MT70 800 aa16.01■□□□□ 0.15
TUBB4B-201ENST00000340384 AMHP03971 560 aa16.01■□□□□ 0.15
TUBB4B-201ENST00000340384 SSTR3P32745 418 aaPredicted RBP16.01■□□□□ 0.15
TUBB4B-201ENST00000340384 HSPA9P38646 679 aaKnown RBP16.01■□□□□ 0.15
TUBB4B-201ENST00000340384 SSR1P43307 286 aaKnown RBP16.01■□□□□ 0.15
TUBB4B-201ENST00000340384 CNGA2Q16280 664 aa16.01■□□□□ 0.15
TUBB4B-201ENST00000340384 ODF2Q5BJF6 829 aa16.01■□□□□ 0.15
TUBB4B-201ENST00000340384 FAM109BQ6ICB4 259 aaPredicted RBP16.01■□□□□ 0.15
TUBB4B-201ENST00000340384 SYDE1Q6ZW31 735 aaPredicted RBP16.01■□□□□ 0.15
TUBB4B-201ENST00000340384 PHLDB2Q86SQ0 1253 aa16.01■□□□□ 0.15
TUBB4B-201ENST00000340384 JAMLQ86YT9 394 aa16.01■□□□□ 0.15
TUBB4B-201ENST00000340384 CCDC50Q8IVM0 306 aa16.01■□□□□ 0.15
TUBB4B-201ENST00000340384 HACE1Q8IYU2 909 aa16.01■□□□□ 0.15
TUBB4B-201ENST00000340384 NIPA2Q8N8Q9 360 aa16.01■□□□□ 0.15
TUBB4B-201ENST00000340384 SLC4A11Q8NBS3 891 aa16.01■□□□□ 0.15
TUBB4B-201ENST00000340384 DDX27Q96GQ7 796 aaKnown RBP16.01■□□□□ 0.15
TUBB4B-201ENST00000340384 PAAF1Q9BRP4 392 aa16.01■□□□□ 0.15
TUBB4B-201ENST00000340384 NT5C1AQ9BXI3 368 aa16.01■□□□□ 0.15
TUBB4B-201ENST00000340384 PLEKHA4Q9H4M7 779 aa16.01■□□□□ 0.15
TUBB4B-201ENST00000340384 LRRC19Q9H756 370 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms