RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 GJB1P08034 283 aa11.26□□□□□ -0.61
TRAF3IP2-201ENST00000340026 MMP3P08254 477 aa11.26□□□□□ -0.61
TRAF3IP2-201ENST00000340026 FAM163BP0C2L3 166 aa11.26□□□□□ -0.61
TRAF3IP2-201ENST00000340026 IL1R2P27930 398 aa11.26□□□□□ -0.61
TRAF3IP2-201ENST00000340026 STIP1P31948 543 aaKnown RBP11.26□□□□□ -0.61
TRAF3IP2-201ENST00000340026 LONRF1Q17RB8 773 aa11.26□□□□□ -0.61
TRAF3IP2-201ENST00000340026 ZNF394Q53GI3 561 aa11.26□□□□□ -0.61
TRAF3IP2-201ENST00000340026 FAM47CQ5HY64 1035 aa11.26□□□□□ -0.61
TRAF3IP2-201ENST00000340026 WDR78Q5VTH9 848 aa11.26□□□□□ -0.61
TRAF3IP2-201ENST00000340026 ARHGAP17Q68EM7 881 aa11.26□□□□□ -0.61
TRAF3IP2-201ENST00000340026 TXNRD3NBQ6F5E7 133 aa11.26□□□□□ -0.61
TRAF3IP2-201ENST00000340026 SCARA5Q6ZMJ2 495 aa11.26□□□□□ -0.61
TRAF3IP2-201ENST00000340026 ARHGEF18Q6ZSZ5 1173 aa11.26□□□□□ -0.61
TRAF3IP2-201ENST00000340026 CENPUQ71F23 418 aa11.26□□□□□ -0.61
TRAF3IP2-201ENST00000340026 CPLX4Q7Z7G2 160 aa11.26□□□□□ -0.61
TRAF3IP2-201ENST00000340026 PPIL6Q8IXY8 311 aa11.26□□□□□ -0.61
TRAF3IP2-201ENST00000340026 ANKS4BQ8N8V4 417 aa11.26□□□□□ -0.61
TRAF3IP2-201ENST00000340026 NAT8LQ8N9F0 302 aa11.26□□□□□ -0.61
TRAF3IP2-201ENST00000340026 CCDC197Q8NCU1 140 aa11.26□□□□□ -0.61
TRAF3IP2-201ENST00000340026 MDM1Q8TC05 714 aa11.26□□□□□ -0.61
TRAF3IP2-201ENST00000340026 CCT6BQ92526 530 aa11.26□□□□□ -0.61
TRAF3IP2-201ENST00000340026 CABS1Q96KC9 395 aa11.26□□□□□ -0.61
TRAF3IP2-201ENST00000340026 NT5C1AQ9BXI3 368 aa11.26□□□□□ -0.61
TRAF3IP2-201ENST00000340026 ADAMTS10Q9H324 1103 aa11.26□□□□□ -0.61
TRAF3IP2-201ENST00000340026 PRDM16Q9HAZ2 1276 aa11.26□□□□□ -0.61
TRAF3IP2-201ENST00000340026 GBA2Q9HCG7 927 aaPredicted RBP11.26□□□□□ -0.61
TRAF3IP2-201ENST00000340026 DPP3Q9NY33 737 aa11.26□□□□□ -0.61
TRAF3IP2-201ENST00000340026 NXF1Q9UBU9 619 aaKnown RBP11.26□□□□□ -0.61
TRAF3IP2-201ENST00000340026 MBLAC1A4D2B0 266 aaPredicted RBP11.25□□□□□ -0.61
TRAF3IP2-201ENST00000340026 RNF8O76064 485 aa11.25□□□□□ -0.61
TRAF3IP2-201ENST00000340026 CD19P15391 556 aa11.25□□□□□ -0.61
TRAF3IP2-201ENST00000340026 ATF7P17544 494 aaPredicted RBP11.25□□□□□ -0.61
TRAF3IP2-201ENST00000340026 TTLL12Q14166 644 aaPredicted RBP11.25□□□□□ -0.61
TRAF3IP2-201ENST00000340026 PDK2Q15119 407 aa11.25□□□□□ -0.61
TRAF3IP2-201ENST00000340026 GRIK4Q16099 956 aa11.25□□□□□ -0.61
TRAF3IP2-201ENST00000340026 XKR4Q5GH76 650 aa11.25□□□□□ -0.61
TRAF3IP2-201ENST00000340026 TMEM63BQ5T3F8 832 aa11.25□□□□□ -0.61
TRAF3IP2-201ENST00000340026 CYP4A22Q5TCH4 519 aa11.25□□□□□ -0.61
TRAF3IP2-201ENST00000340026 ALKAL1Q6UXT8 129 aa11.25□□□□□ -0.61
TRAF3IP2-201ENST00000340026 LIMS2Q7Z4I7 341 aa11.25□□□□□ -0.61
TRAF3IP2-201ENST00000340026 TMEM110Q86TL2 294 aa11.25□□□□□ -0.61
TRAF3IP2-201ENST00000340026 SLC10A4Q96EP9 437 aa11.25□□□□□ -0.61
TRAF3IP2-201ENST00000340026 SELENOSQ9BQE4 189 aa11.25□□□□□ -0.61
TRAF3IP2-201ENST00000340026 DHRS4Q9BTZ2 278 aa11.25□□□□□ -0.61
TRAF3IP2-201ENST00000340026 SLC4A5Q9BY07 1137 aa11.25□□□□□ -0.61
TRAF3IP2-201ENST00000340026 SMIM35A0A1B0GVV1 85 aa11.25□□□□□ -0.61
TRAF3IP2-201ENST00000340026 GLTPD2A6NH11 291 aa11.25□□□□□ -0.61
TRAF3IP2-201ENST00000340026 KRT19P08727 400 aa11.25□□□□□ -0.61
TRAF3IP2-201ENST00000340026 SSR1P43307 286 aaKnown RBP11.25□□□□□ -0.61
TRAF3IP2-201ENST00000340026 DGKDQ16760 1214 aa11.25□□□□□ -0.61
TRAF3IP2-201ENST00000340026 FAM110CQ1W6H9 321 aa11.25□□□□□ -0.61
TRAF3IP2-201ENST00000340026 C4orf22Q6V702 233 aa11.25□□□□□ -0.61
TRAF3IP2-201ENST00000340026 CYP4V2Q6ZWL3 525 aaPredicted RBP11.25□□□□□ -0.61
TRAF3IP2-201ENST00000340026 GRAMD1AQ96CP6 724 aa11.25□□□□□ -0.61
TRAF3IP2-201ENST00000340026 MAML3Q96JK9 1138 aa11.25□□□□□ -0.61
TRAF3IP2-201ENST00000340026 SNX27Q96L92 541 aa11.25□□□□□ -0.61
TRAF3IP2-201ENST00000340026 METTL5Q9NRN9 209 aaKnown RBP11.25□□□□□ -0.61
TRAF3IP2-201ENST00000340026 CNTN3Q9P232 1028 aa11.25□□□□□ -0.61
TRAF3IP2-201ENST00000340026 NAALADL1Q9UQQ1 740 aa11.25□□□□□ -0.61
TRAF3IP2-201ENST00000340026 AKT3Q9Y243 479 aa11.25□□□□□ -0.61
TRAF3IP2-201ENST00000340026 NRCAMQ92823 1304 aa11.24□□□□□ -0.61
TRAF3IP2-201ENST00000340026 TMEM120BA0PK00 339 aa11.24□□□□□ -0.61
TRAF3IP2-201ENST00000340026 PI4K2BG5E9Z4 385 aa11.24□□□□□ -0.61
TRAF3IP2-201ENST00000340026 PDHXO00330 501 aa11.24□□□□□ -0.61
TRAF3IP2-201ENST00000340026 PECAM1P16284 738 aaPredicted RBP11.24□□□□□ -0.61
TRAF3IP2-201ENST00000340026 GPD1P21695 349 aa11.24□□□□□ -0.61
TRAF3IP2-201ENST00000340026 GCAP28676 217 aa11.24□□□□□ -0.61
TRAF3IP2-201ENST00000340026 SSTR3P32745 418 aaPredicted RBP11.24□□□□□ -0.61
TRAF3IP2-201ENST00000340026 MAGEA6P43360 314 aa11.24□□□□□ -0.61
TRAF3IP2-201ENST00000340026 RAP1GAPP47736 663 aa11.24□□□□□ -0.61
TRAF3IP2-201ENST00000340026 TFDP2Q14188 446 aa11.24□□□□□ -0.61
TRAF3IP2-201ENST00000340026 TRIP13Q15645 432 aaPredicted RBP11.24□□□□□ -0.61
TRAF3IP2-201ENST00000340026 EFHC2Q5JST6 749 aa11.24□□□□□ -0.61
TRAF3IP2-201ENST00000340026 CCDC121Q6ZUS5 278 aa11.24□□□□□ -0.61
TRAF3IP2-201ENST00000340026 MICALL1Q8N3F8 863 aa11.24□□□□□ -0.61
TRAF3IP2-201ENST00000340026 FAF2Q96CS3 445 aa11.24□□□□□ -0.61
TRAF3IP2-201ENST00000340026 MAGEB18Q96M61 343 aa11.24□□□□□ -0.61
TRAF3IP2-201ENST00000340026 OSBPL7Q9BZF2 842 aa11.24□□□□□ -0.61
TRAF3IP2-201ENST00000340026 USP18Q9UMW8 372 aa11.24□□□□□ -0.61
TRAF3IP2-201ENST00000340026 SMG5Q9UPR3 1016 aaKnown RBP11.24□□□□□ -0.61
TRAF3IP2-201ENST00000340026 CFAP69A5D8W1 941 aa11.24□□□□□ -0.61
TRAF3IP2-201ENST00000340026 A6NJR5 290 aa11.24□□□□□ -0.61
TRAF3IP2-201ENST00000340026 MDM4O15151 490 aa11.24□□□□□ -0.61
TRAF3IP2-201ENST00000340026 ITGBL1O95965 494 aaPredicted RBP11.24□□□□□ -0.61
TRAF3IP2-201ENST00000340026 PFKMP08237 780 aa11.24□□□□□ -0.61
TRAF3IP2-201ENST00000340026 MIPP30301 263 aa11.24□□□□□ -0.61
TRAF3IP2-201ENST00000340026 CDH8P55286 799 aa11.24□□□□□ -0.61
TRAF3IP2-201ENST00000340026 OTUD4Q01804 1114 aaKnown RBP11.24□□□□□ -0.61
TRAF3IP2-201ENST00000340026 GPS1Q13098 491 aa11.24□□□□□ -0.61
TRAF3IP2-201ENST00000340026 NOMO1Q15155 1222 aa11.24□□□□□ -0.61
TRAF3IP2-201ENST00000340026 TTC31Q49AM3 519 aaPredicted RBP11.24□□□□□ -0.61
TRAF3IP2-201ENST00000340026 BOLA3Q53S33 107 aa11.24□□□□□ -0.61
TRAF3IP2-201ENST00000340026 ANKRD20A8PQ5CZ79 823 aa11.24□□□□□ -0.61
TRAF3IP2-201ENST00000340026 SLC27A1Q6PCB7 646 aa11.24□□□□□ -0.61
TRAF3IP2-201ENST00000340026 TRABD2AQ86V40 505 aa11.24□□□□□ -0.61
TRAF3IP2-201ENST00000340026 ACTL9Q8TC94 416 aa11.24□□□□□ -0.61
TRAF3IP2-201ENST00000340026 UPF1Q92900 1129 aaKnown RBP eCLIP11.24□□□□□ -0.61
TRAF3IP2-201ENST00000340026 HMGXB4Q9UGU5 601 aa11.24□□□□□ -0.61
TRAF3IP2-201ENST00000340026 AGAP1Q9UPQ3 857 aa11.24□□□□□ -0.61
TRAF3IP2-201ENST00000340026 KAT6AQ92794 2004 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms