RNA–Protein interactions for RNA: ENST00000339276.5

SFN-201, Transcript of stratifin, humanhuman

APPRIS P1 BASIC

Gene SFN, Length 1,320 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFN-201ENST00000339276 CBX2Q14781 532 aaPredicted RBP17.75■□□□□ 0.43
SFN-201ENST00000339276 NR1I3Q14994 352 aa17.75■□□□□ 0.43
SFN-201ENST00000339276 AAK1Q2M2I8 961 aa17.75■□□□□ 0.43
SFN-201ENST00000339276 ATAT1Q5SQI0 421 aa17.75■□□□□ 0.43
SFN-201ENST00000339276 CYP26C1Q6V0L0 522 aa17.75■□□□□ 0.43
SFN-201ENST00000339276 ELMOD1Q8N336 334 aa17.75■□□□□ 0.43
SFN-201ENST00000339276 ATXN2LQ8WWM7 1075 aaKnown RBP17.75■□□□□ 0.43
SFN-201ENST00000339276 SMARCD1Q96GM5 515 aa17.75■□□□□ 0.43
SFN-201ENST00000339276 RIPOR3Q96MK2 946 aa17.75■□□□□ 0.43
SFN-201ENST00000339276 HNRNPABQ99729 332 aaKnown RBP17.75■□□□□ 0.43
SFN-201ENST00000339276 GPR88Q9GZN0 384 aa17.75■□□□□ 0.43
SFN-201ENST00000339276 RBSNQ9H1K0 784 aa17.75■□□□□ 0.43
SFN-201ENST00000339276 POMKQ9H5K3 350 aa17.75■□□□□ 0.43
SFN-201ENST00000339276 IFNKQ9P0W0 207 aa17.75■□□□□ 0.43
SFN-201ENST00000339276 DNMT3BQ9UBC3 853 aaKnown RBP17.75■□□□□ 0.43
SFN-201ENST00000339276 NOTCH4Q99466 2003 aa17.75■□□□□ 0.43
SFN-201ENST00000339276 F8VP50 259 aa17.74■□□□□ 0.43
SFN-201ENST00000339276 AP1G2O75843 785 aa17.74■□□□□ 0.43
SFN-201ENST00000339276 PAEPP09466 180 aa17.74■□□□□ 0.43
SFN-201ENST00000339276 RFX1P22670 979 aa17.74■□□□□ 0.43
SFN-201ENST00000339276 USP8P40818 1118 aa17.74■□□□□ 0.43
SFN-201ENST00000339276 POLR2FP61218 127 aaKnown RBP17.74■□□□□ 0.43
SFN-201ENST00000339276 VEPH1Q14D04 833 aa17.74■□□□□ 0.43
SFN-201ENST00000339276 PUS10Q3MIT2 529 aaKnown RBP17.74■□□□□ 0.43
SFN-201ENST00000339276 SGO2Q562F6 1265 aa17.74■□□□□ 0.43
SFN-201ENST00000339276 HS6ST3Q8IZP7 471 aa17.74■□□□□ 0.43
SFN-201ENST00000339276 NEK11Q8NG66 645 aa17.74■□□□□ 0.43
SFN-201ENST00000339276 TFAP2BQ92481 460 aa17.74■□□□□ 0.43
SFN-201ENST00000339276 ZNF512Q96ME7 567 aaPredicted RBP17.74■□□□□ 0.43
SFN-201ENST00000339276 CORO1BQ9BR76 489 aa17.74■□□□□ 0.43
SFN-201ENST00000339276 ACP6Q9NPH0 428 aa17.74■□□□□ 0.43
SFN-201ENST00000339276 C5orf42Q9H799 3197 aa17.74■□□□□ 0.43
SFN-201ENST00000339276 MYH10P35580 1976 aa17.74■□□□□ 0.43
SFN-201ENST00000339276 FOXN3O00409 490 aaPredicted RBP17.73■□□□□ 0.43
SFN-201ENST00000339276 TRIM66O15016 1216 aa17.73■□□□□ 0.43
SFN-201ENST00000339276 BEST1O76090 585 aa17.73■□□□□ 0.43
SFN-201ENST00000339276 RHOP08100 348 aa17.73■□□□□ 0.43
SFN-201ENST00000339276 FAM200BP0CF97 657 aa17.73■□□□□ 0.43
SFN-201ENST00000339276 VDRP11473 427 aa17.73■□□□□ 0.43
SFN-201ENST00000339276 PTPN2P17706 415 aa17.73■□□□□ 0.43
SFN-201ENST00000339276 BRD2P25440 801 aaKnown RBP17.73■□□□□ 0.43
SFN-201ENST00000339276 ANXA13P27216 316 aa17.73■□□□□ 0.43
SFN-201ENST00000339276 MTMR3Q13615 1198 aa17.73■□□□□ 0.43
SFN-201ENST00000339276 DRAP1Q14919 205 aaPredicted RBP17.73■□□□□ 0.43
SFN-201ENST00000339276 SMAD2Q15796 467 aaKnown RBP17.73■□□□□ 0.43
SFN-201ENST00000339276 GOLGA7BQ2TAP0 167 aa17.73■□□□□ 0.43
SFN-201ENST00000339276 ARHGAP17Q68EM7 881 aa17.73■□□□□ 0.43
SFN-201ENST00000339276 DNAJB7Q7Z6W7 309 aaPredicted RBP17.73■□□□□ 0.43
SFN-201ENST00000339276 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.73■□□□□ 0.43
SFN-201ENST00000339276 PSMG2Q969U7 264 aa17.73■□□□□ 0.43
SFN-201ENST00000339276 C8orf48Q96LL4 319 aa17.73■□□□□ 0.43
SFN-201ENST00000339276 NECTIN4Q96NY8 510 aa17.73■□□□□ 0.43
SFN-201ENST00000339276 ASB2Q96Q27 587 aa17.73■□□□□ 0.43
SFN-201ENST00000339276 KCNK16Q96T55 309 aa17.73■□□□□ 0.43
SFN-201ENST00000339276 SMOQ99835 787 aa17.73■□□□□ 0.43
SFN-201ENST00000339276 ZSWIM1Q9BR11 485 aa17.73■□□□□ 0.43
SFN-201ENST00000339276 ZNF334Q9HCZ1 680 aaPredicted RBP17.73■□□□□ 0.43
SFN-201ENST00000339276 WDR6Q9NNW5 1121 aaKnown RBP17.73■□□□□ 0.43
SFN-201ENST00000339276 DMAP1Q9NPF5 467 aaPredicted RBP17.73■□□□□ 0.43
SFN-201ENST00000339276 NLRC4Q9NPP4 1024 aa17.73■□□□□ 0.43
SFN-201ENST00000339276 ASB3Q9Y575 518 aa17.73■□□□□ 0.43
SFN-201ENST00000339276 PATJQ8NI35 1801 aa17.73■□□□□ 0.43
SFN-201ENST00000339276 CLUHO75153 1309 aa17.73■□□□□ 0.43
SFN-201ENST00000339276 GREB1Q4ZG55 1949 aa17.73■□□□□ 0.43
SFN-201ENST00000339276 UNC80Q8N2C7 3258 aa17.73■□□□□ 0.43
SFN-201ENST00000339276 A0A1W2PQC6 194 aa17.72■□□□□ 0.43
SFN-201ENST00000339276 SLC38A8A6NNN8 435 aa17.72■□□□□ 0.43
SFN-201ENST00000339276 F8VZ95 297 aa17.72■□□□□ 0.43
SFN-201ENST00000339276 O00370 1275 aa17.72■□□□□ 0.43
SFN-201ENST00000339276 CYP26A1O43174 497 aa17.72■□□□□ 0.43
SFN-201ENST00000339276 SLC34A2O95436 690 aa17.72■□□□□ 0.43
SFN-201ENST00000339276 MAP3K7CLP57077 242 aa17.72■□□□□ 0.43
SFN-201ENST00000339276 PABPC1LQ4VXU2 614 aaKnown RBP17.72■□□□□ 0.43
SFN-201ENST00000339276 CLEC20AQ6ZU45 233 aa17.72■□□□□ 0.43
SFN-201ENST00000339276 ITIH5Q86UX2 942 aa17.72■□□□□ 0.43
SFN-201ENST00000339276 TMC8Q8IU68 726 aa17.72■□□□□ 0.43
SFN-201ENST00000339276 ZMIZ2Q8NF64 920 aa17.72■□□□□ 0.43
SFN-201ENST00000339276 LRRC3Q9BY71 257 aa17.72■□□□□ 0.43
SFN-201ENST00000339276 STK33Q9BYT3 514 aa17.72■□□□□ 0.43
SFN-201ENST00000339276 XPO4Q9C0E2 1151 aaKnown RBP17.72■□□□□ 0.43
SFN-201ENST00000339276 CSNK1G1Q9HCP0 422 aa17.72■□□□□ 0.43
SFN-201ENST00000339276 TSPAN16Q9UKR8 245 aa17.72■□□□□ 0.43
SFN-201ENST00000339276 KIAA1257Q9ULG3 409 aa17.72■□□□□ 0.43
SFN-201ENST00000339276 NRG2O14511 850 aaPredicted RBP17.72■□□□□ 0.43
SFN-201ENST00000339276 MYL4P12829 197 aa17.72■□□□□ 0.43
SFN-201ENST00000339276 HMGA1P17096 107 aaKnown RBP17.72■□□□□ 0.43
SFN-201ENST00000339276 NPR3P17342 541 aa17.72■□□□□ 0.43
SFN-201ENST00000339276 SSTR3P32745 418 aaPredicted RBP17.72■□□□□ 0.43
SFN-201ENST00000339276 PBX1P40424 430 aa17.72■□□□□ 0.43
SFN-201ENST00000339276 SLC5A9Q2M3M2 681 aa17.72■□□□□ 0.43
SFN-201ENST00000339276 TTC30AQ86WT1 665 aa17.72■□□□□ 0.43
SFN-201ENST00000339276 FAM71AQ8IYT1 594 aa17.72■□□□□ 0.43
SFN-201ENST00000339276 SPATA17Q96L03 361 aa17.72■□□□□ 0.43
SFN-201ENST00000339276 ASAH2Q9NR71 780 aa17.72■□□□□ 0.43
SFN-201ENST00000339276 MAGED2Q9UNF1 606 aaPredicted RBP17.72■□□□□ 0.43
SFN-201ENST00000339276 FAM50BQ9Y247 325 aa17.72■□□□□ 0.43
SFN-201ENST00000339276 DAAM1Q9Y4D1 1078 aa17.72■□□□□ 0.43
SFN-201ENST00000339276 CSH1P0DML2 217 aa17.71■□□□□ 0.42
SFN-201ENST00000339276 CSH2P0DML3 217 aa17.71■□□□□ 0.42
SFN-201ENST00000339276 SP100P23497 879 aaPredicted RBP17.71■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms