RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 PLA2G4AP47712 749 aa15.36■□□□□ 0.05
NIPAL3-202ENST00000339255 RABGGTBP53611 331 aa15.36■□□□□ 0.05
NIPAL3-202ENST00000339255 GPC5P78333 572 aa15.36■□□□□ 0.05
NIPAL3-202ENST00000339255 GPR17Q13304 367 aa15.36■□□□□ 0.05
NIPAL3-202ENST00000339255 RAB30Q15771 203 aa15.36■□□□□ 0.05
NIPAL3-202ENST00000339255 SLC39A12Q504Y0 691 aa15.36■□□□□ 0.05
NIPAL3-202ENST00000339255 TAS1R1Q7RTX1 841 aa15.36■□□□□ 0.05
NIPAL3-202ENST00000339255 RHOT2Q8IXI1 618 aa15.36■□□□□ 0.05
NIPAL3-202ENST00000339255 SLC35F5Q8WV83 523 aa15.36■□□□□ 0.05
NIPAL3-202ENST00000339255 RFFLQ8WZ73 363 aa15.36■□□□□ 0.05
NIPAL3-202ENST00000339255 PACSIN1Q9BY11 444 aa15.36■□□□□ 0.05
NIPAL3-202ENST00000339255 LACRTQ9GZZ8 138 aa15.36■□□□□ 0.05
NIPAL3-202ENST00000339255 LZTFL1Q9NQ48 299 aa15.36■□□□□ 0.05
NIPAL3-202ENST00000339255 PCDHB5Q9Y5E4 795 aa15.36■□□□□ 0.05
NIPAL3-202ENST00000339255 RANBP2P49792 3224 aaKnown RBP15.36■□□□□ 0.05
NIPAL3-202ENST00000339255 RCCD1A6NED2 376 aa15.35■□□□□ 0.05
NIPAL3-202ENST00000339255 USP27XA6NNY8 438 aa15.35■□□□□ 0.05
NIPAL3-202ENST00000339255 ABCB4P21439 1286 aa15.35■□□□□ 0.05
NIPAL3-202ENST00000339255 ARHGAP25P42331 645 aa15.35■□□□□ 0.05
NIPAL3-202ENST00000339255 ACADSBP45954 432 aa15.35■□□□□ 0.05
NIPAL3-202ENST00000339255 PDE4CQ08493 712 aa15.35■□□□□ 0.05
NIPAL3-202ENST00000339255 TCEAL1Q15170 157 aa15.35■□□□□ 0.05
NIPAL3-202ENST00000339255 IFI16Q16666 785 aaKnown RBP15.35■□□□□ 0.05
NIPAL3-202ENST00000339255 FAM109BQ6ICB4 259 aaPredicted RBP15.35■□□□□ 0.05
NIPAL3-202ENST00000339255 VSTM1Q6UX27 236 aa15.35■□□□□ 0.05
NIPAL3-202ENST00000339255 MMS22LQ6ZRQ5 1243 aa15.35■□□□□ 0.05
NIPAL3-202ENST00000339255 PAQR9Q6ZVX9 377 aa15.35■□□□□ 0.05
NIPAL3-202ENST00000339255 LRRTM3Q86VH5 581 aa15.35■□□□□ 0.05
NIPAL3-202ENST00000339255 WDTC1Q8N5D0 677 aa15.35■□□□□ 0.05
NIPAL3-202ENST00000339255 RNF10Q8N5U6 811 aaKnown RBP15.35■□□□□ 0.05
NIPAL3-202ENST00000339255 FBXO22Q8NEZ5 403 aa15.35■□□□□ 0.05
NIPAL3-202ENST00000339255 UBA3Q8TBC4 463 aa15.35■□□□□ 0.05
NIPAL3-202ENST00000339255 SPPL2BQ8TCT7 592 aa15.35■□□□□ 0.05
NIPAL3-202ENST00000339255 ZNF653Q96CK0 615 aa15.35■□□□□ 0.05
NIPAL3-202ENST00000339255 HSFY1Q96LI6 401 aa15.35■□□□□ 0.05
NIPAL3-202ENST00000339255 TGS1Q96RS0 853 aaKnown RBP15.35■□□□□ 0.05
NIPAL3-202ENST00000339255 LPIN3Q9BQK8 851 aa15.35■□□□□ 0.05
NIPAL3-202ENST00000339255 THAP2Q9H0W7 228 aa15.35■□□□□ 0.05
NIPAL3-202ENST00000339255 ZBP1Q9H171 429 aa15.35■□□□□ 0.05
NIPAL3-202ENST00000339255 CSNK1G1Q9HCP0 422 aa15.35■□□□□ 0.05
NIPAL3-202ENST00000339255 PNPLA8Q9NP80 782 aa15.35■□□□□ 0.05
NIPAL3-202ENST00000339255 DMAP1Q9NPF5 467 aaPredicted RBP15.35■□□□□ 0.05
NIPAL3-202ENST00000339255 FNIP2Q9P278 1114 aa15.35■□□□□ 0.05
NIPAL3-202ENST00000339255 WDR35Q9P2L0 1181 aa15.35■□□□□ 0.05
NIPAL3-202ENST00000339255 MSRAQ9UJ68 235 aa15.35■□□□□ 0.05
NIPAL3-202ENST00000339255 SCINQ9Y6U3 715 aa15.35■□□□□ 0.05
NIPAL3-202ENST00000339255 LAMA2P24043 3122 aaKnown RBP15.35■□□□□ 0.05
NIPAL3-202ENST00000339255 ZNF500O60304 480 aaPredicted RBP15.35■□□□□ 0.05
NIPAL3-202ENST00000339255 AP1G2O75843 785 aa15.35■□□□□ 0.05
NIPAL3-202ENST00000339255 CYP1A2P05177 515 aa15.35■□□□□ 0.05
NIPAL3-202ENST00000339255 CA3P07451 260 aa15.35■□□□□ 0.05
NIPAL3-202ENST00000339255 CTSAP10619 480 aa15.35■□□□□ 0.05
NIPAL3-202ENST00000339255 MAGEA11P43364 429 aa15.35■□□□□ 0.05
NIPAL3-202ENST00000339255 GABRB2P47870 512 aa15.35■□□□□ 0.05
NIPAL3-202ENST00000339255 GSCP56915 257 aaPredicted RBP15.35■□□□□ 0.05
NIPAL3-202ENST00000339255 CCDC142Q17RM4 750 aa15.35■□□□□ 0.05
NIPAL3-202ENST00000339255 PRSS55Q6UWB4 352 aaPredicted RBP15.35■□□□□ 0.05
NIPAL3-202ENST00000339255 CLEC20AQ6ZU45 233 aa15.35■□□□□ 0.05
NIPAL3-202ENST00000339255 TDHQ8IZJ6 230 aa15.35■□□□□ 0.05
NIPAL3-202ENST00000339255 C18orf8Q96DM3 657 aa15.35■□□□□ 0.05
NIPAL3-202ENST00000339255 TMEM209Q96SK2 561 aa15.35■□□□□ 0.05
NIPAL3-202ENST00000339255 CPXM1Q96SM3 734 aa15.35■□□□□ 0.05
NIPAL3-202ENST00000339255 C11orf70Q9BRQ4 267 aa15.35■□□□□ 0.05
NIPAL3-202ENST00000339255 SLC4A5Q9BY07 1137 aa15.35■□□□□ 0.05
NIPAL3-202ENST00000339255 UBXN6Q9BZV1 441 aa15.35■□□□□ 0.05
NIPAL3-202ENST00000339255 MRPL47Q9HD33 250 aaKnown RBP15.35■□□□□ 0.05
NIPAL3-202ENST00000339255 ST7Q9NRC1 585 aa15.35■□□□□ 0.05
NIPAL3-202ENST00000339255 UVRAGQ9P2Y5 699 aa15.35■□□□□ 0.05
NIPAL3-202ENST00000339255 MYO1AQ9UBC5 1043 aa15.35■□□□□ 0.05
NIPAL3-202ENST00000339255 MAFFQ9ULX9 164 aa15.35■□□□□ 0.05
NIPAL3-202ENST00000339255 CDY1Q9Y6F8 540 aa15.35■□□□□ 0.05
NIPAL3-202ENST00000339255 GRXCR1A8MXD5 290 aa15.34■□□□□ 0.05
NIPAL3-202ENST00000339255 CLDN5O00501 218 aa15.34■□□□□ 0.05
NIPAL3-202ENST00000339255 RPL34P49207 117 aaKnown RBP15.34■□□□□ 0.05
NIPAL3-202ENST00000339255 ERVK-21P61565 698 aa15.34■□□□□ 0.05
NIPAL3-202ENST00000339255 PTP4A2Q12974 167 aa15.34■□□□□ 0.05
NIPAL3-202ENST00000339255 PTPN20Q4JDL3 420 aa15.34■□□□□ 0.05
NIPAL3-202ENST00000339255 TPGS2Q68CL5 300 aa15.34■□□□□ 0.05
NIPAL3-202ENST00000339255 TMEM110Q86TL2 294 aa15.34■□□□□ 0.05
NIPAL3-202ENST00000339255 ZDHHC17Q8IUH5 632 aa15.34■□□□□ 0.05
NIPAL3-202ENST00000339255 C17orf53Q8N3J3 647 aaPredicted RBP15.34■□□□□ 0.05
NIPAL3-202ENST00000339255 KCTD13Q8WZ19 329 aa15.34■□□□□ 0.05
NIPAL3-202ENST00000339255 PARVAQ9NVD7 372 aa15.34■□□□□ 0.05
NIPAL3-202ENST00000339255 TMLHEQ9NVH6 421 aa15.34■□□□□ 0.05
NIPAL3-202ENST00000339255 ABI2Q9NYB9 513 aaPredicted RBP15.34■□□□□ 0.05
NIPAL3-202ENST00000339255 HSFX1Q9UBD0 423 aa15.34■□□□□ 0.05
NIPAL3-202ENST00000339255 CNOT8Q9UFF9 292 aaKnown RBP15.34■□□□□ 0.05
NIPAL3-202ENST00000339255 CYTH4Q9UIA0 394 aa15.34■□□□□ 0.05
NIPAL3-202ENST00000339255 GUCA1BQ9UMX6 200 aa15.34■□□□□ 0.05
NIPAL3-202ENST00000339255 IRAK3Q9Y616 596 aa15.34■□□□□ 0.05
NIPAL3-202ENST00000339255 KIF2AO00139 706 aaPredicted RBP15.33■□□□□ 0.04
NIPAL3-202ENST00000339255 C2CD2LO14523 706 aa15.33■□□□□ 0.04
NIPAL3-202ENST00000339255 KIF5CO60282 957 aa15.33■□□□□ 0.04
NIPAL3-202ENST00000339255 TUBB4AP04350 444 aa15.33■□□□□ 0.04
NIPAL3-202ENST00000339255 OR4Q2P0C623 313 aa15.33■□□□□ 0.04
NIPAL3-202ENST00000339255 BDNFP23560 247 aa15.33■□□□□ 0.04
NIPAL3-202ENST00000339255 NDUFV1P49821 464 aa15.33■□□□□ 0.04
NIPAL3-202ENST00000339255 HADHBP55084 474 aaKnown RBP15.33■□□□□ 0.04
NIPAL3-202ENST00000339255 ROR1Q01973 937 aa15.33■□□□□ 0.04
NIPAL3-202ENST00000339255 TAP1Q03518 808 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms