RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 RIN2Q8WYP3 895 aaPredicted RBP23.63■■□□□ 1.37
PDLIM2-203ENST00000339162 RAPGEF5Q92565 580 aa23.63■■□□□ 1.37
PDLIM2-203ENST00000339162 VIPAS39Q9H9C1 493 aa23.63■■□□□ 1.37
PDLIM2-203ENST00000339162 PCYOX1Q9UHG3 505 aa23.63■■□□□ 1.37
PDLIM2-203ENST00000339162 CASTOR2A6NHX0 329 aa23.62■■□□□ 1.37
PDLIM2-203ENST00000339162 GSCP56915 257 aaPredicted RBP23.62■■□□□ 1.37
PDLIM2-203ENST00000339162 WSCD1Q658N2 575 aa23.62■■□□□ 1.37
PDLIM2-203ENST00000339162 MFSD7Q6UXD7 560 aa23.62■■□□□ 1.37
PDLIM2-203ENST00000339162 SLC35F5Q8WV83 523 aa23.62■■□□□ 1.37
PDLIM2-203ENST00000339162 B3GNT5Q9BYG0 378 aa23.62■■□□□ 1.37
PDLIM2-203ENST00000339162 HMX1Q9NP08 348 aaPredicted RBP23.62■■□□□ 1.37
PDLIM2-203ENST00000339162 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.62■■□□□ 1.37
PDLIM2-203ENST00000339162 SNX24Q9Y343 169 aa23.62■■□□□ 1.37
PDLIM2-203ENST00000339162 GABBR2O75899 941 aa23.61■■□□□ 1.37
PDLIM2-203ENST00000339162 CABYRO75952 493 aa23.61■■□□□ 1.37
PDLIM2-203ENST00000339162 POMCP01189 267 aa23.61■■□□□ 1.37
PDLIM2-203ENST00000339162 IL1R2P27930 398 aa23.61■■□□□ 1.37
PDLIM2-203ENST00000339162 FLT3P36888 993 aa23.61■■□□□ 1.37
PDLIM2-203ENST00000339162 SH3PXD2AQ5TCZ1 1133 aa23.61■■□□□ 1.37
PDLIM2-203ENST00000339162 TRNP1Q6NT89 227 aa23.61■■□□□ 1.37
PDLIM2-203ENST00000339162 C3orf58Q8NDZ4 430 aa23.61■■□□□ 1.37
PDLIM2-203ENST00000339162 SLC2A14Q8TDB8 520 aa23.61■■□□□ 1.37
PDLIM2-203ENST00000339162 SEC14L1Q92503 715 aa23.61■■□□□ 1.37
PDLIM2-203ENST00000339162 RAB17Q9H0T7 212 aa23.61■■□□□ 1.37
PDLIM2-203ENST00000339162 PCSK1NQ9UHG2 260 aa23.61■■□□□ 1.37
PDLIM2-203ENST00000339162 TIMM13Q9Y5L4 95 aaPredicted RBP23.61■■□□□ 1.37
PDLIM2-203ENST00000339162 RPLP2P05387 115 aaKnown RBP23.61■■□□□ 1.37
PDLIM2-203ENST00000339162 KLF1Q13351 362 aaPredicted RBP23.61■■□□□ 1.37
PDLIM2-203ENST00000339162 RAB6CQ53S08 254 aa23.61■■□□□ 1.37
PDLIM2-203ENST00000339162 DUPD1Q68J44 220 aa23.61■■□□□ 1.37
PDLIM2-203ENST00000339162 LIMS2Q7Z4I7 341 aa23.61■■□□□ 1.37
PDLIM2-203ENST00000339162 CRYBG2Q8N1P7 616 aa23.61■■□□□ 1.37
PDLIM2-203ENST00000339162 SLITRK1Q96PX8 696 aa23.61■■□□□ 1.37
PDLIM2-203ENST00000339162 MIS12Q9H081 205 aa23.61■■□□□ 1.37
PDLIM2-203ENST00000339162 RAB6CQ9H0N0 254 aa23.61■■□□□ 1.37
PDLIM2-203ENST00000339162 LRRC19Q9H756 370 aa23.61■■□□□ 1.37
PDLIM2-203ENST00000339162 SLC38A7Q9NVC3 462 aa23.61■■□□□ 1.37
PDLIM2-203ENST00000339162 A0A1W2PQ45 241 aaPredicted RBP23.6■■□□□ 1.37
PDLIM2-203ENST00000339162 A0A1W2PQY0 241 aa23.6■■□□□ 1.37
PDLIM2-203ENST00000339162 GIT1Q9Y2X7 761 aa23.6■■□□□ 1.37
PDLIM2-203ENST00000339162 LRRD1A4D1F6 860 aa23.6■■□□□ 1.37
PDLIM2-203ENST00000339162 FAM187AA6NFU0 413 aa23.6■■□□□ 1.37
PDLIM2-203ENST00000339162 FKTNO75072 461 aa23.6■■□□□ 1.37
PDLIM2-203ENST00000339162 CKBP12277 381 aa23.6■■□□□ 1.37
PDLIM2-203ENST00000339162 GRK4P32298 578 aa23.6■■□□□ 1.37
PDLIM2-203ENST00000339162 GGCXP38435 758 aa23.6■■□□□ 1.37
PDLIM2-203ENST00000339162 SLC25A11Q02978 314 aaKnown RBP23.6■■□□□ 1.37
PDLIM2-203ENST00000339162 DSC3Q14574 896 aa23.6■■□□□ 1.37
PDLIM2-203ENST00000339162 ODF2Q5BJF6 829 aa23.6■■□□□ 1.37
PDLIM2-203ENST00000339162 ARHGAP17Q68EM7 881 aa23.6■■□□□ 1.37
PDLIM2-203ENST00000339162 MRPL10Q7Z7H8 261 aaKnown RBP23.6■■□□□ 1.37
PDLIM2-203ENST00000339162 RCOR2Q8IZ40 523 aa23.6■■□□□ 1.37
PDLIM2-203ENST00000339162 C12orf50Q8NA57 414 aaPredicted RBP23.6■■□□□ 1.37
PDLIM2-203ENST00000339162 FNIP1Q8TF40 1166 aa23.6■■□□□ 1.37
PDLIM2-203ENST00000339162 INPP5FQ9Y2H2 1132 aa23.6■■□□□ 1.37
PDLIM2-203ENST00000339162 MOXD2PA6NHM9 499 aa23.59■■□□□ 1.37
PDLIM2-203ENST00000339162 AGPSO00116 658 aa23.59■■□□□ 1.37
PDLIM2-203ENST00000339162 PODXLO00592 558 aa23.59■■□□□ 1.37
PDLIM2-203ENST00000339162 TKTP29401 623 aaKnown RBP23.59■■□□□ 1.37
PDLIM2-203ENST00000339162 GPS2Q13227 327 aa23.59■■□□□ 1.37
PDLIM2-203ENST00000339162 PAN2Q504Q3 1202 aaKnown RBP23.59■■□□□ 1.37
PDLIM2-203ENST00000339162 LRRC38Q5VT99 294 aa23.59■■□□□ 1.37
PDLIM2-203ENST00000339162 TOP6BLQ8N6T0 577 aa23.59■■□□□ 1.37
PDLIM2-203ENST00000339162 SH3TC2Q8TF17 1288 aa23.59■■□□□ 1.37
PDLIM2-203ENST00000339162 SENP8Q96LD8 212 aa23.59■■□□□ 1.37
PDLIM2-203ENST00000339162 SLC4A5Q9BY07 1137 aa23.59■■□□□ 1.37
PDLIM2-203ENST00000339162 ACBD3Q9H3P7 528 aa23.59■■□□□ 1.37
PDLIM2-203ENST00000339162 STARD7Q9NQZ5 370 aa23.59■■□□□ 1.37
PDLIM2-203ENST00000339162 LCMT1Q9UIC8 334 aa23.59■■□□□ 1.37
PDLIM2-203ENST00000339162 RASAL2Q9UJF2 1139 aa23.59■■□□□ 1.37
PDLIM2-203ENST00000339162 PTCH2Q9Y6C5 1203 aa23.59■■□□□ 1.37
PDLIM2-203ENST00000339162 A0A0U1RQF3 1178 aa23.59■■□□□ 1.37
PDLIM2-203ENST00000339162 GOLGA6BA6NDN3 693 aa23.59■■□□□ 1.37
PDLIM2-203ENST00000339162 CDO1Q16878 200 aa23.59■■□□□ 1.37
PDLIM2-203ENST00000339162 C15orf59Q2T9L4 293 aaPredicted RBP23.59■■□□□ 1.37
PDLIM2-203ENST00000339162 CLEC4CQ8WTT0 213 aa23.59■■□□□ 1.37
PDLIM2-203ENST00000339162 RXFP2Q8WXD0 754 aa23.59■■□□□ 1.37
PDLIM2-203ENST00000339162 DCLK3Q9C098 648 aa23.59■■□□□ 1.37
PDLIM2-203ENST00000339162 RSAD1Q9HA92 442 aa23.59■■□□□ 1.37
PDLIM2-203ENST00000339162 FAM114A2Q9NRY5 505 aa23.59■■□□□ 1.37
PDLIM2-203ENST00000339162 PAPSS1O43252 624 aaPredicted RBP23.58■■□□□ 1.37
PDLIM2-203ENST00000339162 PDGFRAP16234 1089 aa23.58■■□□□ 1.37
PDLIM2-203ENST00000339162 FNTAP49354 379 aa23.58■■□□□ 1.37
PDLIM2-203ENST00000339162 GYS2P54840 703 aa23.58■■□□□ 1.37
PDLIM2-203ENST00000339162 NNTQ13423 1086 aa23.58■■□□□ 1.37
PDLIM2-203ENST00000339162 ANKRD52Q8NB46 1076 aa23.58■■□□□ 1.37
PDLIM2-203ENST00000339162 B3GALNT2Q8NCR0 500 aa23.58■■□□□ 1.37
PDLIM2-203ENST00000339162 RBM41Q96IZ5 413 aaKnown RBP23.58■■□□□ 1.37
PDLIM2-203ENST00000339162 I3L4J1 428 aa23.57■■□□□ 1.36
PDLIM2-203ENST00000339162 CLDN5O00501 218 aa23.57■■□□□ 1.36
PDLIM2-203ENST00000339162 SYF2O95926 243 aaKnown RBP23.57■■□□□ 1.36
PDLIM2-203ENST00000339162 GNRH1P01148 92 aa23.57■■□□□ 1.36
PDLIM2-203ENST00000339162 WARSP23381 471 aaKnown RBP23.57■■□□□ 1.36
PDLIM2-203ENST00000339162 RPL21P46778 160 aaKnown RBP23.57■■□□□ 1.36
PDLIM2-203ENST00000339162 MBTPS1Q14703 1052 aa23.57■■□□□ 1.36
PDLIM2-203ENST00000339162 KIAA0319Q5VV43 1072 aa23.57■■□□□ 1.36
PDLIM2-203ENST00000339162 OLFML1Q6UWY5 402 aa23.57■■□□□ 1.36
PDLIM2-203ENST00000339162 SPOCD1Q6ZMY3 1216 aa23.57■■□□□ 1.36
PDLIM2-203ENST00000339162 TMEM110Q86TL2 294 aa23.57■■□□□ 1.36
PDLIM2-203ENST00000339162 ZNF784Q8NCA9 323 aaPredicted RBP23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms