RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 SV2BQ7L1I2 683 aa16.77■□□□□ 0.28
LINC01116-202ENST00000339037 SPATA2LQ8IUW3 424 aaPredicted RBP16.77■□□□□ 0.28
LINC01116-202ENST00000339037 ADGRF2Q8IZF7 708 aa16.77■□□□□ 0.28
LINC01116-202ENST00000339037 SYCP3Q8IZU3 236 aa16.77■□□□□ 0.28
LINC01116-202ENST00000339037 CSGALNACT2Q8N6G5 542 aa16.77■□□□□ 0.28
LINC01116-202ENST00000339037 ZSWIM2Q8NEG5 633 aa16.77■□□□□ 0.28
LINC01116-202ENST00000339037 OSCP1Q8WVF1 389 aa16.77■□□□□ 0.28
LINC01116-202ENST00000339037 ATP2A3Q93084 1043 aa16.77■□□□□ 0.28
LINC01116-202ENST00000339037 DNAJC19Q96DA6 116 aa16.77■□□□□ 0.28
LINC01116-202ENST00000339037 ZC3H10Q96K80 434 aaKnown RBP16.77■□□□□ 0.28
LINC01116-202ENST00000339037 HHIPQ96QV1 700 aa16.77■□□□□ 0.28
LINC01116-202ENST00000339037 PKMYT1Q99640 499 aa16.77■□□□□ 0.28
LINC01116-202ENST00000339037 ECT2Q9H8V3 914 aa16.77■□□□□ 0.28
LINC01116-202ENST00000339037 OLFML3Q9NRN5 406 aa16.77■□□□□ 0.28
LINC01116-202ENST00000339037 RXFP3Q9NSD7 469 aa16.77■□□□□ 0.28
LINC01116-202ENST00000339037 DUS2Q9NX74 493 aaKnown RBP16.77■□□□□ 0.28
LINC01116-202ENST00000339037 GDAP2Q9NXN4 497 aa16.77■□□□□ 0.28
LINC01116-202ENST00000339037 GTF3C4Q9UKN8 822 aa16.77■□□□□ 0.28
LINC01116-202ENST00000339037 PCDHGA5Q9Y5G8 931 aa16.77■□□□□ 0.28
LINC01116-202ENST00000339037 SNX9Q9Y5X1 595 aa16.77■□□□□ 0.28
LINC01116-202ENST00000339037 CLIC4Q9Y696 253 aa16.77■□□□□ 0.28
LINC01116-202ENST00000339037 KRT19P08727 400 aa16.76■□□□□ 0.27
LINC01116-202ENST00000339037 USP17L7P0C7H9 530 aa16.76■□□□□ 0.27
LINC01116-202ENST00000339037 IDEP14735 1019 aa16.76■□□□□ 0.27
LINC01116-202ENST00000339037 MPLP40238 635 aa16.76■□□□□ 0.27
LINC01116-202ENST00000339037 IFNAR2P48551 515 aa16.76■□□□□ 0.27
LINC01116-202ENST00000339037 LHX1P48742 406 aa16.76■□□□□ 0.27
LINC01116-202ENST00000339037 CASP5P51878 434 aa16.76■□□□□ 0.27
LINC01116-202ENST00000339037 USP4Q13107 963 aa16.76■□□□□ 0.27
LINC01116-202ENST00000339037 ALCAMQ13740 583 aa16.76■□□□□ 0.27
LINC01116-202ENST00000339037 ZNF77Q15935 545 aa16.76■□□□□ 0.27
LINC01116-202ENST00000339037 CCDC142Q17RM4 750 aa16.76■□□□□ 0.27
LINC01116-202ENST00000339037 PLA2G2CQ5R387 149 aa16.76■□□□□ 0.27
LINC01116-202ENST00000339037 TOP6BLQ8N6T0 577 aa16.76■□□□□ 0.27
LINC01116-202ENST00000339037 RPLP0P6Q8NHW5 317 aa16.76■□□□□ 0.27
LINC01116-202ENST00000339037 CXorf38Q8TB03 319 aa16.76■□□□□ 0.27
LINC01116-202ENST00000339037 SPATA18Q8TC71 538 aa16.76■□□□□ 0.27
LINC01116-202ENST00000339037 NOC3LQ8WTT2 800 aaKnown RBP16.76■□□□□ 0.27
LINC01116-202ENST00000339037 ACDQ96AP0 544 aa16.76■□□□□ 0.27
LINC01116-202ENST00000339037 FUBP3Q96I24 572 aaKnown RBP eCLIP16.76■□□□□ 0.27
LINC01116-202ENST00000339037 CHAMP1Q96JM3 812 aa16.76■□□□□ 0.27
LINC01116-202ENST00000339037 FAM84AQ96KN4 292 aa16.76■□□□□ 0.27
LINC01116-202ENST00000339037 SLC22A12Q96S37 553 aa16.76■□□□□ 0.27
LINC01116-202ENST00000339037 CYP2S1Q96SQ9 504 aa16.76■□□□□ 0.27
LINC01116-202ENST00000339037 CBWD1Q9BRT8 395 aa16.76■□□□□ 0.27
LINC01116-202ENST00000339037 MTMR12Q9C0I1 747 aa16.76■□□□□ 0.27
LINC01116-202ENST00000339037 POLR3BQ9NW08 1133 aaPredicted RBP16.76■□□□□ 0.27
LINC01116-202ENST00000339037 FBXO2Q9UK22 296 aaPredicted RBP16.76■□□□□ 0.27
LINC01116-202ENST00000339037 WNT6Q9Y6F9 365 aa16.76■□□□□ 0.27
LINC01116-202ENST00000339037 GREB1Q4ZG55 1949 aa16.76■□□□□ 0.27
LINC01116-202ENST00000339037 DENND4CQ5VZ89 1909 aa16.75■□□□□ 0.27
LINC01116-202ENST00000339037 ATG2BQ96BY7 2078 aa16.75■□□□□ 0.27
LINC01116-202ENST00000339037 GOLGA8IPA6NC78 632 aa16.75■□□□□ 0.27
LINC01116-202ENST00000339037 GOLGA8JA6NMD2 632 aa16.75■□□□□ 0.27
LINC01116-202ENST00000339037 TMEM191BP0C7N4 346 aa16.75■□□□□ 0.27
LINC01116-202ENST00000339037 RBP5P82980 135 aa16.75■□□□□ 0.27
LINC01116-202ENST00000339037 KCNB1Q14721 858 aa16.75■□□□□ 0.27
LINC01116-202ENST00000339037 ELF2Q15723 593 aa16.75■□□□□ 0.27
LINC01116-202ENST00000339037 PLK5Q496M5 336 aa16.75■□□□□ 0.27
LINC01116-202ENST00000339037 STPG1Q5TH74 334 aa16.75■□□□□ 0.27
LINC01116-202ENST00000339037 SYT13Q7L8C5 426 aa16.75■□□□□ 0.27
LINC01116-202ENST00000339037 OSTM1Q86WC4 334 aa16.75■□□□□ 0.27
LINC01116-202ENST00000339037 SCN4BQ8IWT1 228 aa16.75■□□□□ 0.27
LINC01116-202ENST00000339037 FSIP1Q8NA03 581 aa16.75■□□□□ 0.27
LINC01116-202ENST00000339037 CD101Q93033 1021 aa16.75■□□□□ 0.27
LINC01116-202ENST00000339037 PDE11AQ9HCR9 933 aa16.75■□□□□ 0.27
LINC01116-202ENST00000339037 VPS45Q9NRW7 570 aa16.75■□□□□ 0.27
LINC01116-202ENST00000339037 SIX4Q9UIU6 781 aa16.75■□□□□ 0.27
LINC01116-202ENST00000339037 R3HCC1Q9Y3T6 440 aaKnown RBP16.75■□□□□ 0.27
LINC01116-202ENST00000339037 SRPRBQ9Y5M8 271 aaKnown RBP16.75■□□□□ 0.27
LINC01116-202ENST00000339037 ZNF638Q14966 1978 aaKnown RBP16.75■□□□□ 0.27
LINC01116-202ENST00000339037 OBSL1O75147 1896 aa16.74■□□□□ 0.27
LINC01116-202ENST00000339037 GABRDO14764 452 aa16.74■□□□□ 0.27
LINC01116-202ENST00000339037 HCRTO43612 131 aa16.74■□□□□ 0.27
LINC01116-202ENST00000339037 APBB3O95704 486 aa16.74■□□□□ 0.27
LINC01116-202ENST00000339037 MYO1EQ12965 1108 aa16.74■□□□□ 0.27
LINC01116-202ENST00000339037 DMC1Q14565 340 aa16.74■□□□□ 0.27
LINC01116-202ENST00000339037 SOWAHAQ2M3V2 549 aa16.74■□□□□ 0.27
LINC01116-202ENST00000339037 EML3Q32P44 896 aa16.74■□□□□ 0.27
LINC01116-202ENST00000339037 SCARA3Q6AZY7 606 aa16.74■□□□□ 0.27
LINC01116-202ENST00000339037 FAM173BQ6P4H8 233 aa16.74■□□□□ 0.27
LINC01116-202ENST00000339037 C4orf50Q6ZRC1 276 aa16.74■□□□□ 0.27
LINC01116-202ENST00000339037 CCDC73Q6ZRK6 1079 aa16.74■□□□□ 0.27
LINC01116-202ENST00000339037 ARL14EPQ8N8R7 260 aaPredicted RBP16.74■□□□□ 0.27
LINC01116-202ENST00000339037 SH3RF2Q8TEC5 729 aa16.74■□□□□ 0.27
LINC01116-202ENST00000339037 CLIC6Q96NY7 704 aa16.74■□□□□ 0.27
LINC01116-202ENST00000339037 BACH2Q9BYV9 841 aa16.74■□□□□ 0.27
LINC01116-202ENST00000339037 SMOC1Q9H4F8 434 aa16.74■□□□□ 0.27
LINC01116-202ENST00000339037 ANGPTL2Q9UKU9 493 aa16.74■□□□□ 0.27
LINC01116-202ENST00000339037 C2orf78A6NCI8 922 aa16.73■□□□□ 0.27
LINC01116-202ENST00000339037 TM4SF5O14894 197 aa16.73■□□□□ 0.27
LINC01116-202ENST00000339037 PDCP20941 246 aa16.73■□□□□ 0.27
LINC01116-202ENST00000339037 SYT1P21579 422 aa16.73■□□□□ 0.27
LINC01116-202ENST00000339037 STAT6P42226 847 aa16.73■□□□□ 0.27
LINC01116-202ENST00000339037 MAGEA11P43364 429 aa16.73■□□□□ 0.27
LINC01116-202ENST00000339037 PDE6CP51160 858 aa16.73■□□□□ 0.27
LINC01116-202ENST00000339037 RESTQ13127 1097 aa16.73■□□□□ 0.27
LINC01116-202ENST00000339037 NR1H3Q13133 447 aa16.73■□□□□ 0.27
LINC01116-202ENST00000339037 PSMD2Q13200 908 aa16.73■□□□□ 0.27
LINC01116-202ENST00000339037 CCDC26Q8TAB7 109 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms