RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 METTL5Q9NRN9 209 aaKnown RBP17.11■□□□□ 0.33
HPS1-202ENST00000338546 HPCAL4Q9UM19 191 aa17.11■□□□□ 0.33
HPS1-202ENST00000338546 A0A1W2PQ45 241 aaPredicted RBP17.11■□□□□ 0.33
HPS1-202ENST00000338546 A0A1W2PQY0 241 aa17.11■□□□□ 0.33
HPS1-202ENST00000338546 ZSCAN5CA6NGD5 496 aaPredicted RBP17.11■□□□□ 0.33
HPS1-202ENST00000338546 E5RJQ4 531 aa17.11■□□□□ 0.33
HPS1-202ENST00000338546 DPYSL4O14531 572 aa17.11■□□□□ 0.33
HPS1-202ENST00000338546 RNF8O76064 485 aa17.11■□□□□ 0.33
HPS1-202ENST00000338546 TJP3O95049 919 aa17.11■□□□□ 0.33
HPS1-202ENST00000338546 EOMESO95936 686 aa17.11■□□□□ 0.33
HPS1-202ENST00000338546 CKBP12277 381 aa17.11■□□□□ 0.33
HPS1-202ENST00000338546 DESP17661 470 aa17.11■□□□□ 0.33
HPS1-202ENST00000338546 SLC6A3Q01959 620 aa17.11■□□□□ 0.33
HPS1-202ENST00000338546 GRIK3Q13003 919 aa17.11■□□□□ 0.33
HPS1-202ENST00000338546 CCNG2Q16589 344 aa17.11■□□□□ 0.33
HPS1-202ENST00000338546 ODF2Q5BJF6 829 aa17.11■□□□□ 0.33
HPS1-202ENST00000338546 ZNF618Q5T7W0 954 aa17.11■□□□□ 0.33
HPS1-202ENST00000338546 FAM102AQ5T9C2 384 aaPredicted RBP17.11■□□□□ 0.33
HPS1-202ENST00000338546 ADAT2Q7Z6V5 191 aaKnown RBP17.11■□□□□ 0.33
HPS1-202ENST00000338546 CCDC50Q8IVM0 306 aa17.11■□□□□ 0.33
HPS1-202ENST00000338546 JOSD2Q8TAC2 188 aa17.11■□□□□ 0.33
HPS1-202ENST00000338546 SLITRK1Q96PX8 696 aa17.11■□□□□ 0.33
HPS1-202ENST00000338546 HNRNPABQ99729 332 aaKnown RBP17.11■□□□□ 0.33
HPS1-202ENST00000338546 ST7Q9NRC1 585 aa17.11■□□□□ 0.33
HPS1-202ENST00000338546 TJP2Q9UDY2 1190 aa17.11■□□□□ 0.33
HPS1-202ENST00000338546 TCRBV7S2A1N4TA0A589 114 aa17.1■□□□□ 0.33
HPS1-202ENST00000338546 ESYT3A0FGR9 886 aa17.1■□□□□ 0.33
HPS1-202ENST00000338546 ARHGEF37A1IGU5 675 aa17.1■□□□□ 0.33
HPS1-202ENST00000338546 C2CD4BA6NLJ0 364 aa17.1■□□□□ 0.33
HPS1-202ENST00000338546 ARVCFO00192 962 aa17.1■□□□□ 0.33
HPS1-202ENST00000338546 LRCH4O75427 683 aa17.1■□□□□ 0.33
HPS1-202ENST00000338546 GPD1P21695 349 aa17.1■□□□□ 0.33
HPS1-202ENST00000338546 ECHS1P30084 290 aa17.1■□□□□ 0.33
HPS1-202ENST00000338546 SLC8A3P57103 927 aa17.1■□□□□ 0.33
HPS1-202ENST00000338546 SLC25A11Q02978 314 aaKnown RBP17.1■□□□□ 0.33
HPS1-202ENST00000338546 OR6B2Q6IFH4 312 aa17.1■□□□□ 0.33
HPS1-202ENST00000338546 PMF1Q6P1K2 205 aa17.1■□□□□ 0.33
HPS1-202ENST00000338546 DRICH1Q6PGQ1 229 aaPredicted RBP17.1■□□□□ 0.33
HPS1-202ENST00000338546 GSPT2Q8IYD1 628 aaKnown RBP17.1■□□□□ 0.33
HPS1-202ENST00000338546 CCDC105Q8IYK2 499 aa17.1■□□□□ 0.33
HPS1-202ENST00000338546 B3GALNT2Q8NCR0 500 aa17.1■□□□□ 0.33
HPS1-202ENST00000338546 LRRC45Q96CN5 670 aa17.1■□□□□ 0.33
HPS1-202ENST00000338546 SENP8Q96LD8 212 aa17.1■□□□□ 0.33
HPS1-202ENST00000338546 ADAM2Q99965 735 aa17.1■□□□□ 0.33
HPS1-202ENST00000338546 FRMD8P1Q9BZ68 369 aaPredicted RBP17.1■□□□□ 0.33
HPS1-202ENST00000338546 RGS18Q9NS28 235 aa17.1■□□□□ 0.33
HPS1-202ENST00000338546 FAM49BQ9NUQ9 324 aa17.1■□□□□ 0.33
HPS1-202ENST00000338546 RNF19AQ9NV58 838 aa17.1■□□□□ 0.33
HPS1-202ENST00000338546 FRMPD3Q5JV73 1810 aa17.09■□□□□ 0.33
HPS1-202ENST00000338546 MEIS3P2A8K0S8 358 aa17.09■□□□□ 0.33
HPS1-202ENST00000338546 KBTBD13C9JR72 458 aa17.09■□□□□ 0.33
HPS1-202ENST00000338546 MGEA5O60502 916 aa17.09■□□□□ 0.33
HPS1-202ENST00000338546 ECEL1O95672 775 aa17.09■□□□□ 0.33
HPS1-202ENST00000338546 KRT1P04264 644 aa17.09■□□□□ 0.33
HPS1-202ENST00000338546 RALAP11233 206 aa17.09■□□□□ 0.33
HPS1-202ENST00000338546 COL6A1P12109 1028 aa17.09■□□□□ 0.33
HPS1-202ENST00000338546 LMO2P25791 158 aa17.09■□□□□ 0.33
HPS1-202ENST00000338546 LMNB2Q03252 620 aa17.09■□□□□ 0.33
HPS1-202ENST00000338546 PDE4CQ08493 712 aa17.09■□□□□ 0.33
HPS1-202ENST00000338546 HLTFQ14527 1009 aaKnown RBP eCLIP17.09■□□□□ 0.33
HPS1-202ENST00000338546 UPP1Q16831 310 aa17.09■□□□□ 0.33
HPS1-202ENST00000338546 HSP90B2PQ58FF3 399 aa17.09■□□□□ 0.33
HPS1-202ENST00000338546 SPDYCQ5MJ68 293 aa17.09■□□□□ 0.33
HPS1-202ENST00000338546 TTC27Q6P3X3 843 aa17.09■□□□□ 0.33
HPS1-202ENST00000338546 TRAF7Q6Q0C0 670 aa17.09■□□□□ 0.33
HPS1-202ENST00000338546 OLFML1Q6UWY5 402 aa17.09■□□□□ 0.33
HPS1-202ENST00000338546 FAM183BPQ6ZVS7 135 aa17.09■□□□□ 0.33
HPS1-202ENST00000338546 ZNF598Q86UK7 904 aaKnown RBP17.09■□□□□ 0.33
HPS1-202ENST00000338546 ECHDC2Q86YB7 292 aa17.09■□□□□ 0.33
HPS1-202ENST00000338546 ATL2Q8NHH9 583 aa17.09■□□□□ 0.33
HPS1-202ENST00000338546 HINFPQ9BQA5 517 aa17.09■□□□□ 0.33
HPS1-202ENST00000338546 FTHL17Q9BXU8 183 aa17.09■□□□□ 0.33
HPS1-202ENST00000338546 DCLK3Q9C098 648 aa17.09■□□□□ 0.33
HPS1-202ENST00000338546 DPEP3Q9H4B8 488 aa17.09■□□□□ 0.33
HPS1-202ENST00000338546 MIOSQ9NXC5 875 aa17.09■□□□□ 0.33
HPS1-202ENST00000338546 XPO1O14980 1071 aaKnown RBP17.08■□□□□ 0.32
HPS1-202ENST00000338546 DAPK3O43293 454 aa17.08■□□□□ 0.32
HPS1-202ENST00000338546 PDGFRBP09619 1106 aa17.08■□□□□ 0.32
HPS1-202ENST00000338546 PTPN1P18031 435 aaKnown RBP17.08■□□□□ 0.32
HPS1-202ENST00000338546 HSPA9P38646 679 aaKnown RBP17.08■□□□□ 0.32
HPS1-202ENST00000338546 SCNN1GP51170 649 aa17.08■□□□□ 0.32
HPS1-202ENST00000338546 FAM189BP81408 668 aa17.08■□□□□ 0.32
HPS1-202ENST00000338546 PLCB3Q01970 1234 aa17.08■□□□□ 0.32
HPS1-202ENST00000338546 TAZQ16635 292 aa17.08■□□□□ 0.32
HPS1-202ENST00000338546 TFDP3Q5H9I0 405 aa17.08■□□□□ 0.32
HPS1-202ENST00000338546 SPOCD1Q6ZMY3 1216 aa17.08■□□□□ 0.32
HPS1-202ENST00000338546 OSTM1Q86WC4 334 aa17.08■□□□□ 0.32
HPS1-202ENST00000338546 LPPQ93052 612 aa17.08■□□□□ 0.32
HPS1-202ENST00000338546 DUSP16Q9BY84 665 aa17.08■□□□□ 0.32
HPS1-202ENST00000338546 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.08■□□□□ 0.32
HPS1-202ENST00000338546 GAS8O95995 478 aa17.07■□□□□ 0.32
HPS1-202ENST00000338546 PDGFRAP16234 1089 aa17.07■□□□□ 0.32
HPS1-202ENST00000338546 CDK7P50613 346 aa17.07■□□□□ 0.32
HPS1-202ENST00000338546 CLCNKBP51801 687 aa17.07■□□□□ 0.32
HPS1-202ENST00000338546 CBX1P83916 185 aa17.07■□□□□ 0.32
HPS1-202ENST00000338546 TUSC3Q13454 348 aa17.07■□□□□ 0.32
HPS1-202ENST00000338546 DAB2IPQ5VWQ8 1189 aa17.07■□□□□ 0.32
HPS1-202ENST00000338546 WSCD1Q658N2 575 aa17.07■□□□□ 0.32
HPS1-202ENST00000338546 SLC26A9Q7LBE3 791 aa17.07■□□□□ 0.32
HPS1-202ENST00000338546 VSIG1Q86XK7 387 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms