RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 HAUS5O94927 633 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 RPS6KA2Q15349 733 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 LMNTD2Q8IXW0 634 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 MYCBPAPQ8TBZ2 947 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 FRMD8Q9BZ67 464 aaPredicted RBP6.57□□□□□ -1.36
PRKDC-202ENST00000338368 MROH7Q68CQ1 1323 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 PDK2Q15119 407 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 NUDCD3Q8IVD9 361 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 FBXO36Q8NEA4 188 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 ZSWIM2Q8NEG5 633 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 PPCSQ9HAB8 311 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 ETNK1Q9HBU6 452 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 ZFATQ9P243 1243 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 G3BP2Q9UN86 482 aaKnown RBP6.57□□□□□ -1.36
PRKDC-202ENST00000338368 SNCAIPQ9Y6H5 919 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 PARP4Q9UKK3 1724 aaKnown RBP6.57□□□□□ -1.36
PRKDC-202ENST00000338368 THP07101 528 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 AKAP5P24588 427 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 NFKBIAP25963 317 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 AARSP49588 968 aaKnown RBP eCLIP6.57□□□□□ -1.36
PRKDC-202ENST00000338368 GEMIN4P57678 1058 aaKnown RBP6.57□□□□□ -1.36
PRKDC-202ENST00000338368 MAML1Q92585 1016 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 SIX2Q9NPC8 291 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 ARL2BPQ9Y2Y0 163 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 F8W8V4 182 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 FZD9O00144 591 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 SPAG6O75602 509 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 FAM200BP0CF97 657 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 GRIK1P39086 918 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 DUPD1Q68J44 220 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 TLK2Q86UE8 772 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 NT5DC4Q86YG4 428 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 TEPSINQ96N21 525 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 SYT17Q9BSW7 474 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 TIMM13Q9Y5L4 95 aaPredicted RBP6.57□□□□□ -1.36
PRKDC-202ENST00000338368 RASSF10A6NK89 507 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 TTC4O95801 387 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 GSTA1P08263 222 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 GSTA2P09210 222 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 JAM2P57087 298 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 CRLF3Q8IUI8 442 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 C3orf20Q8ND61 904 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 LRRC19Q9H756 370 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 RBPJLQ9UBG7 517 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 NAALADL1Q9UQQ1 740 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 SYF2O95926 243 aaKnown RBP6.57□□□□□ -1.36
PRKDC-202ENST00000338368 BST2Q10589 180 aaKnown RBP6.57□□□□□ -1.36
PRKDC-202ENST00000338368 PALB2Q86YC2 1186 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 ALG13Q9NP73 1137 aaKnown RBP6.57□□□□□ -1.36
PRKDC-202ENST00000338368 ZC3H7BQ9UGR2 993 aaKnown RBP6.57□□□□□ -1.36
PRKDC-202ENST00000338368 FNDC3AQ9Y2H6 1198 aaKnown RBP6.57□□□□□ -1.36
PRKDC-202ENST00000338368 CYB561D2O14569 222 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 HOXC6P09630 235 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 RAET1EQ8TD07 263 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 FSD1LQ9BXM9 530 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 DCLK3Q9C098 648 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 DDIT4Q9NX09 232 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 BCAP29Q9UHQ4 241 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 USP18Q9UMW8 372 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 FIS1Q9Y3D6 152 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 USP15Q9Y4E8 981 aaPredicted RBP6.57□□□□□ -1.36
PRKDC-202ENST00000338368 RPTORQ8N122 1335 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 BCAT1P54687 386 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 KDELC2Q7Z4H8 507 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 CASZ1Q86V15 1759 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 MAFBQ9Y5Q3 323 aaPredicted RBP6.57□□□□□ -1.36
PRKDC-202ENST00000338368 NCANO14594 1321 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 TCP11X1B4DZS4 312 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 E5RJQ4 531 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 AP1G2O75843 785 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 EPHB2P29323 1055 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 KPNA2P52292 529 aaKnown RBP6.57□□□□□ -1.36
PRKDC-202ENST00000338368 LLGL2Q6P1M3 1020 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 GLT1D1Q96MS3 346 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 DNPEPQ9ULA0 475 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 PAMP19021 973 aa6.56□□□□□ -1.36
PRKDC-202ENST00000338368 FCGRTP55899 365 aa6.56□□□□□ -1.36
PRKDC-202ENST00000338368 PRAMEF19Q5SWL8 479 aa6.56□□□□□ -1.36
PRKDC-202ENST00000338368 MAP3K21Q5TCX8 1036 aa6.56□□□□□ -1.36
PRKDC-202ENST00000338368 DLK2Q6UY11 383 aa6.56□□□□□ -1.36
PRKDC-202ENST00000338368 LRRC34Q8IZ02 419 aa6.56□□□□□ -1.36
PRKDC-202ENST00000338368 FAM96AQ9H5X1 160 aa6.56□□□□□ -1.36
PRKDC-202ENST00000338368 PPARGC1AQ9UBK2 798 aaKnown RBP6.56□□□□□ -1.36
PRKDC-202ENST00000338368 SNRPAP09012 282 aaKnown RBP6.56□□□□□ -1.36
PRKDC-202ENST00000338368 ELF1P32519 619 aa6.56□□□□□ -1.36
PRKDC-202ENST00000338368 VCPP55072 806 aaKnown RBP6.56□□□□□ -1.36
PRKDC-202ENST00000338368 SH3D19Q5HYK7 790 aa6.56□□□□□ -1.36
PRKDC-202ENST00000338368 SCUBE3Q8IX30 993 aa6.56□□□□□ -1.36
PRKDC-202ENST00000338368 PPP1R13LQ8WUF5 828 aa6.56□□□□□ -1.36
PRKDC-202ENST00000338368 AP4E1Q9UPM8 1137 aa6.56□□□□□ -1.36
PRKDC-202ENST00000338368 GOLGA8CPA6NN73 597 aa6.56□□□□□ -1.36
PRKDC-202ENST00000338368 DFFAO00273 331 aa6.56□□□□□ -1.36
PRKDC-202ENST00000338368 GPR182O15218 404 aa6.56□□□□□ -1.36
PRKDC-202ENST00000338368 DDX3YO15523 660 aaKnown RBP6.56□□□□□ -1.36
PRKDC-202ENST00000338368 F9P00740 461 aa6.56□□□□□ -1.36
PRKDC-202ENST00000338368 EPHB1P54762 984 aa6.56□□□□□ -1.36
PRKDC-202ENST00000338368 CACNB2Q08289 660 aaPredicted RBP6.56□□□□□ -1.36
PRKDC-202ENST00000338368 TRADDQ15628 312 aa6.56□□□□□ -1.36
PRKDC-202ENST00000338368 TAF1BQ53T94 588 aaPredicted RBP6.56□□□□□ -1.36
PRKDC-202ENST00000338368 NDUFAF2Q8N183 169 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms