RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 DCAF6Q58WW2 860 aa8.61□□□□□ -1.03
HPS4-201ENST00000336873 TFDP3Q5H9I0 405 aa8.61□□□□□ -1.03
HPS4-201ENST00000336873 TWF2Q6IBS0 349 aaKnown RBP8.61□□□□□ -1.03
HPS4-201ENST00000336873 NUDCD3Q8IVD9 361 aa8.61□□□□□ -1.03
HPS4-201ENST00000336873 UNC45BQ8IWX7 931 aa8.61□□□□□ -1.03
HPS4-201ENST00000336873 NDUFAF2Q8N183 169 aa8.61□□□□□ -1.03
HPS4-201ENST00000336873 POU5F2Q8N7G0 328 aa8.61□□□□□ -1.03
HPS4-201ENST00000336873 RXFP2Q8WXD0 754 aa8.61□□□□□ -1.03
HPS4-201ENST00000336873 THTPAQ9BU02 230 aa8.61□□□□□ -1.03
HPS4-201ENST00000336873 DMAC2Q9NW81 257 aa8.61□□□□□ -1.03
HPS4-201ENST00000336873 NOP53Q9NZM5 478 aaKnown RBP8.61□□□□□ -1.03
HPS4-201ENST00000336873 MYO7AQ13402 2215 aa8.61□□□□□ -1.03
HPS4-201ENST00000336873 MROH7Q68CQ1 1323 aa8.61□□□□□ -1.03
HPS4-201ENST00000336873 MAPTP10636 758 aaKnown RBP8.61□□□□□ -1.03
HPS4-201ENST00000336873 ATXN1P54253 815 aaKnown RBP8.61□□□□□ -1.03
HPS4-201ENST00000336873 FOXD4Q12950 439 aaPredicted RBP8.61□□□□□ -1.03
HPS4-201ENST00000336873 STAT4Q14765 748 aa8.61□□□□□ -1.03
HPS4-201ENST00000336873 ZC3H12AQ5D1E8 599 aaKnown RBP8.61□□□□□ -1.03
HPS4-201ENST00000336873 ANKRD22Q5VYY1 191 aa8.61□□□□□ -1.03
HPS4-201ENST00000336873 POLNQ7Z5Q5 900 aa8.61□□□□□ -1.03
HPS4-201ENST00000336873 RCOR2Q8IZ40 523 aa8.61□□□□□ -1.03
HPS4-201ENST00000336873 FITM2Q8N6M3 262 aa8.61□□□□□ -1.03
HPS4-201ENST00000336873 RNF148Q8N7C7 305 aa8.61□□□□□ -1.03
HPS4-201ENST00000336873 ATP11CQ8NB49 1132 aa8.61□□□□□ -1.03
HPS4-201ENST00000336873 TFAP2BQ92481 460 aa8.61□□□□□ -1.03
HPS4-201ENST00000336873 TSNARE1Q96NA8 513 aa8.61□□□□□ -1.03
HPS4-201ENST00000336873 LRRC4Q9HBW1 653 aa8.61□□□□□ -1.03
HPS4-201ENST00000336873 KIAA1586Q9HCI6 787 aa8.61□□□□□ -1.03
HPS4-201ENST00000336873 USH1CQ9Y6N9 552 aa8.61□□□□□ -1.03
HPS4-201ENST00000336873 ITGB4P16144 1822 aa8.61□□□□□ -1.03
HPS4-201ENST00000336873 ZNF541Q9H0D2 1346 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 E5RJQ4 531 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 RPS6KA5O75582 802 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 HAUS5O94927 633 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 CETPP11597 493 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 MIPP30301 263 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 SLC1A1P43005 524 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 PEX5P50542 639 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 MPP2Q14168 576 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 KBTBD12Q3ZCT8 623 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 LGSNQ5TDP6 509 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 RASGEF1CQ8N431 466 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 MREGQ8N565 214 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 MSL3Q8N5Y2 521 aaKnown RBP8.6□□□□□ -1.03
HPS4-201ENST00000336873 FERMT1Q9BQL6 677 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 TSSK1BQ9BXA7 367 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 KIAA1683Q9H0B3 1180 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 STXBP5LQ9Y2K9 1186 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 KBTBD13C9JR72 458 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 HCRTO43612 131 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 OPHN1O60890 802 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 INSRRP14616 1297 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 NQO1P15559 274 aaKnown RBP8.6□□□□□ -1.03
HPS4-201ENST00000336873 PTGIRP43119 386 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 NOMO3P69849 1222 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 ELF3P78545 371 aaPredicted RBP8.6□□□□□ -1.03
HPS4-201ENST00000336873 SEPT6Q14141 434 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 ZACNQ401N2 412 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 PRAMEF19Q5SWL8 479 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 C1orf220Q5T0J3 134 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 TMCO4Q5TGY1 634 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 DENND5BQ6ZUT9 1274 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 NLRP9Q7RTR0 991 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 SLFN11Q7Z7L1 901 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 AFG1LQ8WV93 481 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 PGBD4Q96DM1 585 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 PGLYRP2Q96PD5 576 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 MMP19Q99542 508 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 OSMRQ99650 979 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 MYLK2Q9H1R3 596 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 SNX25Q9H3E2 840 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 ZNF395Q9H8N7 513 aaPredicted RBP8.6□□□□□ -1.03
HPS4-201ENST00000336873 ZDHHC18Q9NUE0 388 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 KLHL8Q9P2G9 620 aaPredicted RBP8.6□□□□□ -1.03
HPS4-201ENST00000336873 SLC17A7Q9P2U7 560 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 USP18Q9UMW8 372 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 PIN4Q9Y237 131 aaKnown RBP8.6□□□□□ -1.03
HPS4-201ENST00000336873 NOD1Q9Y239 953 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 DNAH12Q6ZR08 3092 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 H0YGN5 161 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 P4HA2O15460 535 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 MED7O43513 233 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 CIB2O75838 187 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 ATP6V1G2O95670 118 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 KRT7P08729 469 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 STAG3L1P0CL83 205 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 ELF1P32519 619 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 ARL4AP40617 200 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 PTGER2P43116 358 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 GLRBP48167 497 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 NDST1P52848 882 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 FAAP100Q0VG06 881 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 SLC1A5Q15758 541 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 RAB6CQ53S08 254 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 NAIF1Q69YI7 327 aaPredicted RBP8.6□□□□□ -1.03
HPS4-201ENST00000336873 ENOSF1Q7L5Y1 443 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 KIAA0319LQ8IZA0 1049 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 LMO3Q8TAP4 145 aa8.6□□□□□ -1.03
HPS4-201ENST00000336873 RAB3IPQ96QF0 476 aaPredicted RBP8.6□□□□□ -1.03
HPS4-201ENST00000336873 RAB6CQ9H0N0 254 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms