RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 GRM5P41594 1212 aa11.71□□□□□ -0.53
POLR1B-202ENST00000333990 RAP1GAPP47736 663 aa11.71□□□□□ -0.53
POLR1B-202ENST00000333990 SCNN1GP51170 649 aa11.71□□□□□ -0.53
POLR1B-202ENST00000333990 COPS2P61201 443 aa11.71□□□□□ -0.53
POLR1B-202ENST00000333990 ORC1Q13415 861 aa11.71□□□□□ -0.53
POLR1B-202ENST00000333990 PABPC1LQ4VXU2 614 aaKnown RBP11.71□□□□□ -0.53
POLR1B-202ENST00000333990 COBLL1Q53SF7 1204 aa11.71□□□□□ -0.53
POLR1B-202ENST00000333990 C12orf56Q8IXR9 622 aa11.71□□□□□ -0.53
POLR1B-202ENST00000333990 PGBD3Q8N328 593 aa11.71□□□□□ -0.53
POLR1B-202ENST00000333990 FAM172AQ8WUF8 416 aa11.71□□□□□ -0.53
POLR1B-202ENST00000333990 NIFKQ9BYG3 293 aaKnown RBP11.71□□□□□ -0.53
POLR1B-202ENST00000333990 BAG5Q9UL15 447 aa11.71□□□□□ -0.53
POLR1B-202ENST00000333990 TPX2Q9ULW0 747 aaKnown RBP11.71□□□□□ -0.53
POLR1B-202ENST00000333990 C10orf71Q711Q0 1435 aa11.71□□□□□ -0.54
POLR1B-202ENST00000333990 TRPM3Q9HCF6 1732 aaPredicted RBP11.71□□□□□ -0.54
POLR1B-202ENST00000333990 SLC12A8A0AV02 714 aa11.71□□□□□ -0.54
POLR1B-202ENST00000333990 UBA6A0AVT1 1052 aaPredicted RBP11.71□□□□□ -0.54
POLR1B-202ENST00000333990 FNTAP49354 379 aa11.71□□□□□ -0.54
POLR1B-202ENST00000333990 MRPS25P82663 173 aaKnown RBP11.71□□□□□ -0.54
POLR1B-202ENST00000333990 POLD3Q15054 466 aaPredicted RBP11.71□□□□□ -0.54
POLR1B-202ENST00000333990 SMTNL2Q2TAL5 461 aa11.71□□□□□ -0.54
POLR1B-202ENST00000333990 LINC00523Q86TU6 105 aa11.71□□□□□ -0.54
POLR1B-202ENST00000333990 SLC13A5Q86YT5 568 aaPredicted RBP11.71□□□□□ -0.54
POLR1B-202ENST00000333990 RAB42Q8N4Z0 105 aa11.71□□□□□ -0.54
POLR1B-202ENST00000333990 RAB3IPQ96QF0 476 aaPredicted RBP11.71□□□□□ -0.54
POLR1B-202ENST00000333990 TSSK1BQ9BXA7 367 aa11.71□□□□□ -0.54
POLR1B-202ENST00000333990 MSRAQ9UJ68 235 aa11.71□□□□□ -0.54
POLR1B-202ENST00000333990 KDM3BQ7LBC6 1761 aa11.71□□□□□ -0.54
POLR1B-202ENST00000333990 CRYBG1Q9Y4K1 1723 aa11.71□□□□□ -0.54
POLR1B-202ENST00000333990 RGPD2P0DJD1 1756 aa11.7□□□□□ -0.54
POLR1B-202ENST00000333990 CTIFO43310 598 aaKnown RBP11.7□□□□□ -0.54
POLR1B-202ENST00000333990 GTF2H3Q13889 308 aa11.7□□□□□ -0.54
POLR1B-202ENST00000333990 SLC47A2Q86VL8 602 aa11.7□□□□□ -0.54
POLR1B-202ENST00000333990 HERC6Q8IVU3 1022 aa11.7□□□□□ -0.54
POLR1B-202ENST00000333990 NSMCE4AQ9NXX6 385 aa11.7□□□□□ -0.54
POLR1B-202ENST00000333990 ZNF112Q9UJU3 913 aa11.7□□□□□ -0.54
POLR1B-202ENST00000333990 TIMM13Q9Y5L4 95 aaPredicted RBP11.7□□□□□ -0.54
POLR1B-202ENST00000333990 KLRC4O43908 158 aa11.7□□□□□ -0.54
POLR1B-202ENST00000333990 YWHAQP27348 245 aa11.7□□□□□ -0.54
POLR1B-202ENST00000333990 TYK2P29597 1187 aa11.7□□□□□ -0.54
POLR1B-202ENST00000333990 CCR1P32246 355 aa11.7□□□□□ -0.54
POLR1B-202ENST00000333990 ZNF135P52742 658 aaPredicted RBP11.7□□□□□ -0.54
POLR1B-202ENST00000333990 YWHAZP63104 245 aaKnown RBP11.7□□□□□ -0.54
POLR1B-202ENST00000333990 TWF1Q12792 350 aa11.7□□□□□ -0.54
POLR1B-202ENST00000333990 EFEMP1Q12805 493 aa11.7□□□□□ -0.54
POLR1B-202ENST00000333990 LRRC52Q8N7C0 313 aa11.7□□□□□ -0.54
POLR1B-202ENST00000333990 RXFP2Q8WXD0 754 aa11.7□□□□□ -0.54
POLR1B-202ENST00000333990 ESYT3A0FGR9 886 aa11.7□□□□□ -0.54
POLR1B-202ENST00000333990 CCNE2O96020 404 aa11.7□□□□□ -0.54
POLR1B-202ENST00000333990 PLEKP08567 350 aaPredicted RBP11.7□□□□□ -0.54
POLR1B-202ENST00000333990 DARSP14868 501 aaKnown RBP11.7□□□□□ -0.54
POLR1B-202ENST00000333990 MLH1P40692 756 aa11.7□□□□□ -0.54
POLR1B-202ENST00000333990 OXCT1P55809 520 aa11.7□□□□□ -0.54
POLR1B-202ENST00000333990 MDM2Q00987 491 aaPredicted RBP11.7□□□□□ -0.54
POLR1B-202ENST00000333990 GRIK3Q13003 919 aa11.7□□□□□ -0.54
POLR1B-202ENST00000333990 ZKSCAN8Q15776 578 aaPredicted RBP11.7□□□□□ -0.54
POLR1B-202ENST00000333990 CCDC149Q6ZUS6 474 aa11.7□□□□□ -0.54
POLR1B-202ENST00000333990 TRMT10CQ7L0Y3 403 aaKnown RBP11.7□□□□□ -0.54
POLR1B-202ENST00000333990 TBC1D1Q86TI0 1168 aaPredicted RBP11.7□□□□□ -0.54
POLR1B-202ENST00000333990 SPATA24Q86W54 205 aa11.7□□□□□ -0.54
POLR1B-202ENST00000333990 USP33Q8TEY7 942 aa11.7□□□□□ -0.54
POLR1B-202ENST00000333990 TFB1MQ8WVM0 346 aaKnown RBP11.7□□□□□ -0.54
POLR1B-202ENST00000333990 SERPINB11Q96P15 392 aa11.7□□□□□ -0.54
POLR1B-202ENST00000333990 XAB2Q9HCS7 855 aaKnown RBP11.7□□□□□ -0.54
POLR1B-202ENST00000333990 DDX20Q9UHI6 824 aaKnown RBP11.7□□□□□ -0.54
POLR1B-202ENST00000333990 CNTNAP2Q9UHC6 1331 aa11.7□□□□□ -0.54
POLR1B-202ENST00000333990 SOWAHBA6NEL2 793 aa11.7□□□□□ -0.54
POLR1B-202ENST00000333990 NCAM2O15394 837 aa11.7□□□□□ -0.54
POLR1B-202ENST00000333990 HSPA4LO95757 839 aa11.7□□□□□ -0.54
POLR1B-202ENST00000333990 ASGR1P07306 291 aa11.7□□□□□ -0.54
POLR1B-202ENST00000333990 RALBP11234 206 aa11.7□□□□□ -0.54
POLR1B-202ENST00000333990 FDFT1P37268 417 aa11.7□□□□□ -0.54
POLR1B-202ENST00000333990 GEMIN4P57678 1058 aaKnown RBP11.7□□□□□ -0.54
POLR1B-202ENST00000333990 ACAP1Q15027 740 aa11.7□□□□□ -0.54
POLR1B-202ENST00000333990 ZNF571Q7Z3V5 609 aaPredicted RBP11.7□□□□□ -0.54
POLR1B-202ENST00000333990 CRLF3Q8IUI8 442 aa11.7□□□□□ -0.54
POLR1B-202ENST00000333990 FIBCD1Q8N539 461 aa11.7□□□□□ -0.54
POLR1B-202ENST00000333990 ZNF557Q8N988 423 aaPredicted RBP11.7□□□□□ -0.54
POLR1B-202ENST00000333990 ULK4Q96C45 1275 aa11.7□□□□□ -0.54
POLR1B-202ENST00000333990 TUBB6Q9BUF5 446 aa11.7□□□□□ -0.54
POLR1B-202ENST00000333990 DDX23Q9BUQ8 820 aaKnown RBP11.7□□□□□ -0.54
POLR1B-202ENST00000333990 CINPQ9BW66 212 aaPredicted RBP11.7□□□□□ -0.54
POLR1B-202ENST00000333990 HIPK3Q9H422 1215 aa11.7□□□□□ -0.54
POLR1B-202ENST00000333990 FAM105AQ9NUU6 356 aa11.7□□□□□ -0.54
POLR1B-202ENST00000333990 IRAK4Q9NWZ3 460 aa11.7□□□□□ -0.54
POLR1B-202ENST00000333990 IPPQ9Y573 584 aa11.7□□□□□ -0.54
POLR1B-202ENST00000333990 PCDHA2Q9Y5H9 948 aa11.7□□□□□ -0.54
POLR1B-202ENST00000333990 TRIM66O15016 1216 aa11.69□□□□□ -0.54
POLR1B-202ENST00000333990 RGPD1P0DJD0 1748 aa11.69□□□□□ -0.54
POLR1B-202ENST00000333990 CLK2P49760 499 aaKnown RBP11.69□□□□□ -0.54
POLR1B-202ENST00000333990 CCL23P55773 120 aa11.69□□□□□ -0.54
POLR1B-202ENST00000333990 SF3A3Q12874 501 aaKnown RBP eCLIP11.69□□□□□ -0.542e-7■■■■■ 27.2
POLR1B-202ENST00000333990 TFDP3Q5H9I0 405 aa11.69□□□□□ -0.54
POLR1B-202ENST00000333990 C4orf32Q8N8J7 132 aa11.69□□□□□ -0.54
POLR1B-202ENST00000333990 MRPL17Q9NRX2 175 aaKnown RBP11.69□□□□□ -0.54
POLR1B-202ENST00000333990 NDFIP2Q9NV92 336 aa11.69□□□□□ -0.54
POLR1B-202ENST00000333990 ARHGAP20Q9P2F6 1191 aa11.69□□□□□ -0.54
POLR1B-202ENST00000333990 DERAQ9Y315 318 aa11.69□□□□□ -0.54
POLR1B-202ENST00000333990 PRLRP16471 622 aa11.69□□□□□ -0.54
POLR1B-202ENST00000333990 CD52P31358 61 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms