RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 H0YIN7 160 aa12.4□□□□□ -0.42
LIMK2-202ENST00000333611 NDC80O14777 642 aa12.4□□□□□ -0.42
LIMK2-202ENST00000333611 TTC4O95801 387 aa12.4□□□□□ -0.42
LIMK2-202ENST00000333611 ADRB2P07550 413 aa12.4□□□□□ -0.42
LIMK2-202ENST00000333611 CYP3A4P08684 503 aa12.4□□□□□ -0.42
LIMK2-202ENST00000333611 CTNNA2P26232 953 aa12.4□□□□□ -0.42
LIMK2-202ENST00000333611 ENTPD1P49961 510 aa12.4□□□□□ -0.42
LIMK2-202ENST00000333611 KRT81Q14533 505 aa12.4□□□□□ -0.42
LIMK2-202ENST00000333611 GSTA3Q16772 222 aa12.4□□□□□ -0.42
LIMK2-202ENST00000333611 TMEM179Q6ZVK1 233 aa12.4□□□□□ -0.42
LIMK2-202ENST00000333611 SREK1Q8WXA9 508 aaKnown RBP12.4□□□□□ -0.42
LIMK2-202ENST00000333611 ACCSQ96QU6 501 aa12.4□□□□□ -0.42
LIMK2-202ENST00000333611 HERPUD2Q9BSE4 406 aa12.4□□□□□ -0.42
LIMK2-202ENST00000333611 CNOT7Q9UIV1 285 aaKnown RBP12.4□□□□□ -0.42
LIMK2-202ENST00000333611 BANF1O75531 89 aa12.39□□□□□ -0.43
LIMK2-202ENST00000333611 PCSK6P29122 969 aa12.39□□□□□ -0.43
LIMK2-202ENST00000333611 CNGA3Q16281 694 aa12.39□□□□□ -0.43
LIMK2-202ENST00000333611 C11orf63Q6NUN7 778 aa12.39□□□□□ -0.43
LIMK2-202ENST00000333611 TRMT10CQ7L0Y3 403 aaKnown RBP12.39□□□□□ -0.43
LIMK2-202ENST00000333611 SIAH1Q8IUQ4 282 aa12.39□□□□□ -0.43
LIMK2-202ENST00000333611 PLEKHO2Q8TD55 490 aa12.39□□□□□ -0.43
LIMK2-202ENST00000333611 DQX1Q8TE96 717 aaKnown RBP12.39□□□□□ -0.43
LIMK2-202ENST00000333611 C10orf88Q9H8K7 445 aa12.39□□□□□ -0.43
LIMK2-202ENST00000333611 LOC100653049A0A140TA62 436 aa12.39□□□□□ -0.43
LIMK2-202ENST00000333611 FBP2O00757 339 aa12.39□□□□□ -0.43
LIMK2-202ENST00000333611 KRT34O76011 436 aa12.39□□□□□ -0.43
LIMK2-202ENST00000333611 ETS1P14921 441 aa12.39□□□□□ -0.43
LIMK2-202ENST00000333611 TNNI1P19237 187 aa12.39□□□□□ -0.43
LIMK2-202ENST00000333611 EIF2AK2P19525 551 aaKnown RBP12.39□□□□□ -0.43
LIMK2-202ENST00000333611 ADRA1DP25100 572 aa12.39□□□□□ -0.43
LIMK2-202ENST00000333611 YWHAGP61981 247 aaKnown RBP eCLIP12.39□□□□□ -0.43
LIMK2-202ENST00000333611 FMO1Q01740 532 aa12.39□□□□□ -0.43
LIMK2-202ENST00000333611 OASLQ15646 514 aaKnown RBP12.39□□□□□ -0.43
LIMK2-202ENST00000333611 PKN2Q16513 984 aaKnown RBP12.39□□□□□ -0.43
LIMK2-202ENST00000333611 SFT2D3Q587I9 215 aa12.39□□□□□ -0.43
LIMK2-202ENST00000333611 TCHHL1Q5QJ38 904 aaPredicted RBP12.39□□□□□ -0.43
LIMK2-202ENST00000333611 RC3H1Q5TC82 1133 aaKnown RBP12.39□□□□□ -0.43
LIMK2-202ENST00000333611 PPP1R14CQ8TAE6 165 aa12.39□□□□□ -0.43
LIMK2-202ENST00000333611 OLIG1Q8TAK6 271 aa12.39□□□□□ -0.43
LIMK2-202ENST00000333611 PPP1R14BQ96C90 147 aa12.39□□□□□ -0.43
LIMK2-202ENST00000333611 THAP11Q96EK4 314 aa12.39□□□□□ -0.43
LIMK2-202ENST00000333611 WDR11Q9BZH6 1224 aa12.39□□□□□ -0.43
LIMK2-202ENST00000333611 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.39□□□□□ -0.438e-13■■■■□ 24.1
LIMK2-202ENST00000333611 TUFT1Q9NNX1 390 aa12.39□□□□□ -0.43
LIMK2-202ENST00000333611 AAASQ9NRG9 546 aa12.39□□□□□ -0.43
LIMK2-202ENST00000333611 COL22A1Q8NFW1 1626 aaPredicted RBP12.39□□□□□ -0.43
LIMK2-202ENST00000333611 A8MU76 341 aa12.39□□□□□ -0.43
LIMK2-202ENST00000333611 MCF2LO15068 1137 aa12.39□□□□□ -0.43
LIMK2-202ENST00000333611 CDH16O75309 829 aa12.39□□□□□ -0.43
LIMK2-202ENST00000333611 DDHD2O94830 711 aa12.39□□□□□ -0.43
LIMK2-202ENST00000333611 NSFP46459 744 aaKnown RBP12.39□□□□□ -0.43
LIMK2-202ENST00000333611 YARSP54577 528 aaKnown RBP12.39□□□□□ -0.43
LIMK2-202ENST00000333611 CLUL1Q15846 466 aa12.39□□□□□ -0.43
LIMK2-202ENST00000333611 SNRNP35Q16560 246 aaKnown RBP12.39□□□□□ -0.43
LIMK2-202ENST00000333611 ATP13A4Q4VNC1 1196 aa12.39□□□□□ -0.43
LIMK2-202ENST00000333611 FASTKD5Q7L8L6 764 aaKnown RBP12.39□□□□□ -0.43
LIMK2-202ENST00000333611 KLHL25Q9H0H3 589 aa12.39□□□□□ -0.43
LIMK2-202ENST00000333611 TRPC7Q9HCX4 862 aa12.39□□□□□ -0.43
LIMK2-202ENST00000333611 NYAP2Q9P242 653 aa12.39□□□□□ -0.43
LIMK2-202ENST00000333611 SUN2Q9UH99 717 aa12.39□□□□□ -0.43
LIMK2-202ENST00000333611 VPS51Q9UID3 782 aa12.39□□□□□ -0.43
LIMK2-202ENST00000333611 PRELID1Q9Y255 219 aa12.39□□□□□ -0.43
LIMK2-202ENST00000333611 MYH11P35749 1972 aa12.38□□□□□ -0.43
LIMK2-202ENST00000333611 TRIM64CA6NLI5 447 aa12.38□□□□□ -0.43
LIMK2-202ENST00000333611 TRMUO75648 421 aaKnown RBP12.38□□□□□ -0.43
LIMK2-202ENST00000333611 ALAS1P13196 640 aa12.38□□□□□ -0.43
LIMK2-202ENST00000333611 VCLP18206 1134 aa12.38□□□□□ -0.43
LIMK2-202ENST00000333611 NOVP48745 357 aa12.38□□□□□ -0.43
LIMK2-202ENST00000333611 DRG2P55039 364 aaKnown RBP12.38□□□□□ -0.43
LIMK2-202ENST00000333611 PHEXP78562 749 aa12.38□□□□□ -0.43
LIMK2-202ENST00000333611 ANKDD1AQ495B1 522 aa12.38□□□□□ -0.43
LIMK2-202ENST00000333611 ZNF394Q53GI3 561 aa12.38□□□□□ -0.43
LIMK2-202ENST00000333611 SPOPLQ6IQ16 392 aa12.38□□□□□ -0.43
LIMK2-202ENST00000333611 BTNL9Q6UXG8 535 aa12.38□□□□□ -0.43
LIMK2-202ENST00000333611 ALYREFQ86V81 257 aaKnown RBP12.38□□□□□ -0.43
LIMK2-202ENST00000333611 DAW1Q8N136 415 aa12.38□□□□□ -0.43
LIMK2-202ENST00000333611 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.38□□□□□ -0.43
LIMK2-202ENST00000333611 SLC35B4Q969S0 331 aa12.38□□□□□ -0.43
LIMK2-202ENST00000333611 SERPINB12Q96P63 405 aa12.38□□□□□ -0.43
LIMK2-202ENST00000333611 TMEM120AQ9BXJ8 343 aa12.38□□□□□ -0.43
LIMK2-202ENST00000333611 ANKFY1Q9P2R3 1169 aa12.38□□□□□ -0.43
LIMK2-202ENST00000333611 PCDHA3Q9Y5H8 950 aa12.38□□□□□ -0.43
LIMK2-202ENST00000333611 IGLV3-22A0A075B6J6 115 aa12.38□□□□□ -0.43
LIMK2-202ENST00000333611 TESPA1A2RU30 521 aaPredicted RBP12.38□□□□□ -0.43
LIMK2-202ENST00000333611 HNRNPDLO14979 420 aaKnown RBP12.38□□□□□ -0.43
LIMK2-202ENST00000333611 PSMD10O75832 226 aa12.38□□□□□ -0.43
LIMK2-202ENST00000333611 MYL2P10916 166 aa12.38□□□□□ -0.43
LIMK2-202ENST00000333611 HSPA1LP34931 641 aa12.38□□□□□ -0.43
LIMK2-202ENST00000333611 CHN2P52757 468 aa12.38□□□□□ -0.43
LIMK2-202ENST00000333611 SLC1A5Q15758 541 aa12.38□□□□□ -0.43
LIMK2-202ENST00000333611 SMUG1Q53HV7 270 aa12.38□□□□□ -0.43
LIMK2-202ENST00000333611 MOXD1Q6UVY6 613 aa12.38□□□□□ -0.43
LIMK2-202ENST00000333611 GET4Q7L5D6 327 aaPredicted RBP12.38□□□□□ -0.43
LIMK2-202ENST00000333611 FBXO27Q8NI29 283 aa12.38□□□□□ -0.43
LIMK2-202ENST00000333611 HEPHQ9BQS7 1158 aa12.38□□□□□ -0.43
LIMK2-202ENST00000333611 FAM213AQ9BRX8 229 aa12.38□□□□□ -0.43
LIMK2-202ENST00000333611 OSBPL10Q9BXB5 764 aa12.38□□□□□ -0.43
LIMK2-202ENST00000333611 CEP44Q9C0F1 390 aa12.38□□□□□ -0.43
LIMK2-202ENST00000333611 CAAP1Q9H8G2 361 aa12.38□□□□□ -0.43
LIMK2-202ENST00000333611 LRRC4BQ9NT99 713 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms