RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 LIN9Q5TKA1 542 aa24.57■■□□□ 1.52
TSEN54-201ENST00000333213 LRRTM3Q86VH5 581 aa24.57■■□□□ 1.52
TSEN54-201ENST00000333213 GPR161Q8N6U8 529 aaKnown RBP24.57■■□□□ 1.52
TSEN54-201ENST00000333213 C18orf8Q96DM3 657 aa24.57■■□□□ 1.52
TSEN54-201ENST00000333213 B3GALT6Q96L58 329 aa24.57■■□□□ 1.52
TSEN54-201ENST00000333213 TMLHEQ9NVH6 421 aa24.57■■□□□ 1.52
TSEN54-201ENST00000333213 HESX1Q9UBX0 185 aa24.57■■□□□ 1.52
TSEN54-201ENST00000333213 MRFAP1Q9Y605 127 aa24.57■■□□□ 1.52
TSEN54-201ENST00000333213 SRGAP2O75044 1071 aa24.56■■□□□ 1.52
TSEN54-201ENST00000333213 EFCAB14O75071 495 aa24.56■■□□□ 1.52
TSEN54-201ENST00000333213 RPL7AP62424 266 aaKnown RBP24.56■■□□□ 1.52
TSEN54-201ENST00000333213 TUBB2AQ13885 445 aa24.56■■□□□ 1.52
TSEN54-201ENST00000333213 PPP1R15BQ5SWA1 713 aa24.56■■□□□ 1.52
TSEN54-201ENST00000333213 FAM171BQ6P995 826 aa24.56■■□□□ 1.52
TSEN54-201ENST00000333213 ZNF771Q7L3S4 317 aaPredicted RBP24.56■■□□□ 1.52
TSEN54-201ENST00000333213 NT5DC3Q86UY8 548 aa24.56■■□□□ 1.52
TSEN54-201ENST00000333213 XYLT1Q86Y38 959 aa24.56■■□□□ 1.52
TSEN54-201ENST00000333213 MYCBPAPQ8TBZ2 947 aa24.56■■□□□ 1.52
TSEN54-201ENST00000333213 TUBB2BQ9BVA1 445 aa24.56■■□□□ 1.52
TSEN54-201ENST00000333213 COLEC11Q9BWP8 271 aa24.56■■□□□ 1.52
TSEN54-201ENST00000333213 ST7Q9NRC1 585 aa24.56■■□□□ 1.52
TSEN54-201ENST00000333213 TMEM30AQ9NV96 361 aa24.56■■□□□ 1.52
TSEN54-201ENST00000333213 E5RJQ4 531 aa24.55■■□□□ 1.52
TSEN54-201ENST00000333213 PCSK1P29120 753 aa24.55■■□□□ 1.52
TSEN54-201ENST00000333213 FPGSQ05932 587 aa24.55■■□□□ 1.52
TSEN54-201ENST00000333213 INTS6LQ5JSJ4 861 aaKnown RBP24.55■■□□□ 1.52
TSEN54-201ENST00000333213 CARD6Q9BX69 1037 aa24.55■■□□□ 1.52
TSEN54-201ENST00000333213 SLC4A5Q9BY07 1137 aa24.55■■□□□ 1.52
TSEN54-201ENST00000333213 PARVAQ9NVD7 372 aa24.55■■□□□ 1.52
TSEN54-201ENST00000333213 CXXC1Q9P0U4 656 aaPredicted RBP24.55■■□□□ 1.52
TSEN54-201ENST00000333213 ANAPC7Q9UJX3 599 aa24.55■■□□□ 1.52
TSEN54-201ENST00000333213 ALG6Q9Y672 507 aa24.55■■□□□ 1.52
TSEN54-201ENST00000333213 TRAPPC3O43617 180 aa24.55■■□□□ 1.52
TSEN54-201ENST00000333213 OAZ2O95190 189 aa24.55■■□□□ 1.52
TSEN54-201ENST00000333213 BCAT1P54687 386 aa24.55■■□□□ 1.52
TSEN54-201ENST00000333213 PLCB3Q01970 1234 aa24.55■■□□□ 1.52
TSEN54-201ENST00000333213 BST2Q10589 180 aaKnown RBP24.55■■□□□ 1.52
TSEN54-201ENST00000333213 MESDQ14696 234 aa24.55■■□□□ 1.52
TSEN54-201ENST00000333213 FAM171A1Q5VUB5 890 aa24.55■■□□□ 1.52
TSEN54-201ENST00000333213 FUT10Q6P4F1 479 aa24.55■■□□□ 1.52
TSEN54-201ENST00000333213 C3orf20Q8ND61 904 aa24.55■■□□□ 1.52
TSEN54-201ENST00000333213 EFEMP2O95967 443 aa24.54■■□□□ 1.52
TSEN54-201ENST00000333213 CACNA2D1P54289 1103 aa24.54■■□□□ 1.52
TSEN54-201ENST00000333213 GSCP56915 257 aaPredicted RBP24.54■■□□□ 1.52
TSEN54-201ENST00000333213 TUBB4BP68371 445 aa24.54■■□□□ 1.52
TSEN54-201ENST00000333213 PPIGQ13427 754 aaKnown RBP eCLIP24.54■■□□□ 1.523e-7■■■□□ 15.8
TSEN54-201ENST00000333213 TAS1R1Q7RTX1 841 aa24.54■■□□□ 1.52
TSEN54-201ENST00000333213 TMEM110Q86TL2 294 aa24.54■■□□□ 1.52
TSEN54-201ENST00000333213 PIWIL1Q96J94 861 aaKnown RBP24.54■■□□□ 1.52
TSEN54-201ENST00000333213 PSMB7Q99436 277 aa24.54■■□□□ 1.52
TSEN54-201ENST00000333213 DUSP16Q9BY84 665 aa24.54■■□□□ 1.52
TSEN54-201ENST00000333213 SNX12Q9UMY4 172 aa24.54■■□□□ 1.52
TSEN54-201ENST00000333213 RANBP2P49792 3224 aaKnown RBP24.54■■□□□ 1.52
TSEN54-201ENST00000333213 SYN3O14994 580 aa24.53■■□□□ 1.52
TSEN54-201ENST00000333213 FGBP02675 491 aa24.53■■□□□ 1.52
TSEN54-201ENST00000333213 SETSIPP0DME0 302 aa24.53■■□□□ 1.52
TSEN54-201ENST00000333213 VARS2Q5ST30 1063 aaKnown RBP24.53■■□□□ 1.52
TSEN54-201ENST00000333213 TMEM240Q5SV17 173 aa24.53■■□□□ 1.52
TSEN54-201ENST00000333213 C11orf63Q6NUN7 778 aa24.53■■□□□ 1.52
TSEN54-201ENST00000333213 CLEC20AQ6ZU45 233 aa24.53■■□□□ 1.52
TSEN54-201ENST00000333213 RSRC2Q7L4I2 434 aaKnown RBP24.53■■□□□ 1.52
TSEN54-201ENST00000333213 STK32AQ8WU08 396 aa24.53■■□□□ 1.52
TSEN54-201ENST00000333213 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.53■■□□□ 1.522e-6■■■■□ 21.8
TSEN54-201ENST00000333213 RHOBTB2Q9BYZ6 727 aa24.53■■□□□ 1.52
TSEN54-201ENST00000333213 DNAI2Q9GZS0 605 aa24.53■■□□□ 1.52
TSEN54-201ENST00000333213 MRPL47Q9HD33 250 aaKnown RBP24.53■■□□□ 1.52
TSEN54-201ENST00000333213 STRIP2Q9ULQ0 834 aa24.53■■□□□ 1.52
TSEN54-201ENST00000333213 ARHGEF37A1IGU5 675 aa24.53■■□□□ 1.52
TSEN54-201ENST00000333213 FGFR3P22607 806 aa24.53■■□□□ 1.52
TSEN54-201ENST00000333213 RPL34P49207 117 aaKnown RBP24.53■■□□□ 1.52
TSEN54-201ENST00000333213 RABGGTBP53611 331 aa24.53■■□□□ 1.52
TSEN54-201ENST00000333213 MRPL58Q14197 206 aaKnown RBP24.53■■□□□ 1.52
TSEN54-201ENST00000333213 CEP57Q86XR8 500 aa24.53■■□□□ 1.52
TSEN54-201ENST00000333213 SYCE1Q8N0S2 351 aa24.53■■□□□ 1.52
TSEN54-201ENST00000333213 THEM5Q8N1Q8 247 aa24.53■■□□□ 1.52
TSEN54-201ENST00000333213 FEZF2Q8TBJ5 459 aa24.53■■□□□ 1.52
TSEN54-201ENST00000333213 MYLPFQ96A32 169 aa24.53■■□□□ 1.52
TSEN54-201ENST00000333213 MCRS1Q96EZ8 462 aa24.53■■□□□ 1.52
TSEN54-201ENST00000333213 CALR3Q96L12 384 aaKnown RBP24.53■■□□□ 1.52
TSEN54-201ENST00000333213 SYNCQ9H7C4 482 aa24.53■■□□□ 1.52
TSEN54-201ENST00000333213 SAR1BQ9Y6B6 198 aa24.53■■□□□ 1.52
TSEN54-201ENST00000333213 SCINQ9Y6U3 715 aa24.53■■□□□ 1.52
TSEN54-201ENST00000333213 TMEM191CA6NGB0 347 aa24.52■■□□□ 1.52
TSEN54-201ENST00000333213 TMEM110-MUSTN1A8MSY1 372 aa24.52■■□□□ 1.52
TSEN54-201ENST00000333213 GOLGA8SH3BPF8 625 aa24.52■■□□□ 1.52
TSEN54-201ENST00000333213 ZNF185O15231 689 aa24.52■■□□□ 1.52
TSEN54-201ENST00000333213 OR4Q2P0C623 313 aa24.52■■□□□ 1.52
TSEN54-201ENST00000333213 NPR3P17342 541 aa24.52■■□□□ 1.52
TSEN54-201ENST00000333213 CXCR5P32302 372 aa24.52■■□□□ 1.52
TSEN54-201ENST00000333213 ALDH7A1P49419 539 aaKnown RBP24.52■■□□□ 1.52
TSEN54-201ENST00000333213 DNA2P51530 1060 aa24.52■■□□□ 1.52
TSEN54-201ENST00000333213 OGDHQ02218 1023 aa24.52■■□□□ 1.52
TSEN54-201ENST00000333213 ZNF268Q14587 947 aaPredicted RBP24.52■■□□□ 1.52
TSEN54-201ENST00000333213 DNAJC24Q6P3W2 148 aa24.52■■□□□ 1.52
TSEN54-201ENST00000333213 PEX26Q7Z412 305 aa24.52■■□□□ 1.52
TSEN54-201ENST00000333213 FAM35AQ86V20 835 aa24.52■■□□□ 1.52
TSEN54-201ENST00000333213 VN1R3Q9BXE9 311 aa24.52■■□□□ 1.52
TSEN54-201ENST00000333213 CDC23Q9UJX2 597 aa24.52■■□□□ 1.52
TSEN54-201ENST00000333213 SF3B1O75533 1304 aaKnown RBP eCLIP24.52■■□□□ 1.52
TSEN54-201ENST00000333213 ZBBXA8MT70 800 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms