RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 SLC8A3P57103 927 aa10.05□□□□□ -0.8
C11orf54-201ENST00000331239 APBA1Q02410 837 aa10.05□□□□□ -0.8
C11orf54-201ENST00000331239 SHHQ15465 462 aa10.05□□□□□ -0.8
C11orf54-201ENST00000331239 INTS6LQ5JSJ4 861 aaKnown RBP10.05□□□□□ -0.8
C11orf54-201ENST00000331239 SLC8B1Q6J4K2 584 aa10.05□□□□□ -0.8
C11orf54-201ENST00000331239 B3GALNT2Q8NCR0 500 aa10.05□□□□□ -0.8
C11orf54-201ENST00000331239 FAM71BQ8TC56 605 aa10.05□□□□□ -0.8
C11orf54-201ENST00000331239 TGS1Q96RS0 853 aaKnown RBP10.05□□□□□ -0.8
C11orf54-201ENST00000331239 PKMYT1Q99640 499 aa10.05□□□□□ -0.8
C11orf54-201ENST00000331239 PAAF1Q9BRP4 392 aa10.05□□□□□ -0.8
C11orf54-201ENST00000331239 PRO3102Q9H379 93 aa10.05□□□□□ -0.8
C11orf54-201ENST00000331239 VIPAS39Q9H9C1 493 aa10.05□□□□□ -0.8
C11orf54-201ENST00000331239 MED4Q9NPJ6 270 aa10.05□□□□□ -0.8
C11orf54-201ENST00000331239 DDX43Q9NXZ2 648 aaKnown RBP10.05□□□□□ -0.8
C11orf54-201ENST00000331239 VPS18Q9P253 973 aa10.05□□□□□ -0.8
C11orf54-201ENST00000331239 MTRRQ9UBK8 725 aa10.05□□□□□ -0.8
C11orf54-201ENST00000331239 H0YGN5 161 aa10.04□□□□□ -0.8
C11orf54-201ENST00000331239 ZNF185O15231 689 aa10.04□□□□□ -0.8
C11orf54-201ENST00000331239 RTN2O75298 545 aa10.04□□□□□ -0.8
C11orf54-201ENST00000331239 SCNN1AP37088 669 aa10.04□□□□□ -0.8
C11orf54-201ENST00000331239 USP8P40818 1118 aa10.04□□□□□ -0.8
C11orf54-201ENST00000331239 FAM171A1Q5VUB5 890 aa10.04□□□□□ -0.8
C11orf54-201ENST00000331239 KIAA0319Q5VV43 1072 aa10.04□□□□□ -0.8
C11orf54-201ENST00000331239 CCDC70Q6NSX1 233 aa10.04□□□□□ -0.8
C11orf54-201ENST00000331239 ZNF571Q7Z3V5 609 aaPredicted RBP10.04□□□□□ -0.8
C11orf54-201ENST00000331239 SCML4Q8N228 414 aa10.04□□□□□ -0.8
C11orf54-201ENST00000331239 ANKRD52Q8NB46 1076 aa10.04□□□□□ -0.8
C11orf54-201ENST00000331239 TMEM35BQ8NCS4 154 aa10.04□□□□□ -0.8
C11orf54-201ENST00000331239 HEXIM2Q96MH2 286 aaKnown RBP10.04□□□□□ -0.8
C11orf54-201ENST00000331239 SYT15Q9BQS2 421 aa10.04□□□□□ -0.8
C11orf54-201ENST00000331239 ISCUQ9H1K1 167 aa10.04□□□□□ -0.8
C11orf54-201ENST00000331239 NGRNQ9NPE2 291 aaKnown RBP10.04□□□□□ -0.8
C11orf54-201ENST00000331239 HESX1Q9UBX0 185 aa10.04□□□□□ -0.8
C11orf54-201ENST00000331239 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.04□□□□□ -0.8
C11orf54-201ENST00000331239 VWA8A3KMH1 1905 aa10.04□□□□□ -0.8
C11orf54-201ENST00000331239 O00370 1275 aa10.04□□□□□ -0.8
C11orf54-201ENST00000331239 PJA2O43164 708 aa10.04□□□□□ -0.8
C11orf54-201ENST00000331239 MOCS3O95396 460 aa10.04□□□□□ -0.8
C11orf54-201ENST00000331239 CTSAP10619 480 aa10.04□□□□□ -0.8
C11orf54-201ENST00000331239 CD58P19256 250 aa10.04□□□□□ -0.8
C11orf54-201ENST00000331239 MAGEA1P43355 309 aa10.04□□□□□ -0.8
C11orf54-201ENST00000331239 TNNT3P45378 269 aaPredicted RBP10.04□□□□□ -0.8
C11orf54-201ENST00000331239 ACADSBP45954 432 aa10.04□□□□□ -0.8
C11orf54-201ENST00000331239 BRCC3P46736 316 aa10.04□□□□□ -0.8
C11orf54-201ENST00000331239 LMAN1P49257 510 aa10.04□□□□□ -0.8
C11orf54-201ENST00000331239 GLUD2P49448 558 aa10.04□□□□□ -0.8
C11orf54-201ENST00000331239 CDH8P55286 799 aa10.04□□□□□ -0.8
C11orf54-201ENST00000331239 GPR17Q13304 367 aa10.04□□□□□ -0.8
C11orf54-201ENST00000331239 CFAP221Q4G0U5 840 aa10.04□□□□□ -0.8
C11orf54-201ENST00000331239 PAN2Q504Q3 1202 aaKnown RBP10.04□□□□□ -0.8
C11orf54-201ENST00000331239 TDRD12Q587J7 1177 aaKnown RBP10.04□□□□□ -0.8
C11orf54-201ENST00000331239 VARS2Q5ST30 1063 aaKnown RBP10.04□□□□□ -0.8
C11orf54-201ENST00000331239 VSTM1Q6UX27 236 aa10.04□□□□□ -0.8
C11orf54-201ENST00000331239 ZNF572Q7Z3I7 529 aaPredicted RBP10.04□□□□□ -0.8
C11orf54-201ENST00000331239 SLC47A2Q86VL8 602 aa10.04□□□□□ -0.8
C11orf54-201ENST00000331239 PHF13Q86YI8 300 aaPredicted RBP10.04□□□□□ -0.8
C11orf54-201ENST00000331239 ZDHHC17Q8IUH5 632 aa10.04□□□□□ -0.8
C11orf54-201ENST00000331239 TDHQ8IZJ6 230 aa10.04□□□□□ -0.8
C11orf54-201ENST00000331239 HDAC7Q8WUI4 952 aa10.04□□□□□ -0.8
C11orf54-201ENST00000331239 FAM84AQ96KN4 292 aa10.04□□□□□ -0.8
C11orf54-201ENST00000331239 HSFY1Q96LI6 401 aa10.04□□□□□ -0.8
C11orf54-201ENST00000331239 WDR35Q9P2L0 1181 aa10.04□□□□□ -0.8
C11orf54-201ENST00000331239 PRG3Q9Y2Y8 225 aaPredicted RBP10.04□□□□□ -0.8
C11orf54-201ENST00000331239 HYOU1Q9Y4L1 999 aa10.04□□□□□ -0.8
C11orf54-201ENST00000331239 LINC01553A4QN01 128 aa10.03□□□□□ -0.8
C11orf54-201ENST00000331239 THAP12O43422 761 aa10.03□□□□□ -0.8
C11orf54-201ENST00000331239 CHRNB2P17787 502 aa10.03□□□□□ -0.8
C11orf54-201ENST00000331239 TCP1P17987 556 aaKnown RBP10.03□□□□□ -0.8
C11orf54-201ENST00000331239 BCAT1P54687 386 aa10.03□□□□□ -0.8
C11orf54-201ENST00000331239 FMO1Q01740 532 aa10.03□□□□□ -0.8
C11orf54-201ENST00000331239 CENPCQ03188 943 aa10.03□□□□□ -0.8
C11orf54-201ENST00000331239 ITIH3Q06033 890 aa10.03□□□□□ -0.8
C11orf54-201ENST00000331239 C1QBPQ07021 282 aaKnown RBP10.03□□□□□ -0.8
C11orf54-201ENST00000331239 C2orf54Q08AI8 447 aa10.03□□□□□ -0.8
C11orf54-201ENST00000331239 CLEC16AQ2KHT3 1053 aa10.03□□□□□ -0.8
C11orf54-201ENST00000331239 PKDCCQ504Y2 493 aa10.03□□□□□ -0.8
C11orf54-201ENST00000331239 SCARA5Q6ZMJ2 495 aa10.03□□□□□ -0.8
C11orf54-201ENST00000331239 NOP9Q86U38 636 aaKnown RBP10.03□□□□□ -0.8
C11orf54-201ENST00000331239 OSTM1Q86WC4 334 aa10.03□□□□□ -0.8
C11orf54-201ENST00000331239 CREG2Q8IUH2 290 aa10.03□□□□□ -0.8
C11orf54-201ENST00000331239 GPIHBP1Q8IV16 184 aa10.03□□□□□ -0.8
C11orf54-201ENST00000331239 SPPL2BQ8TCT7 592 aa10.03□□□□□ -0.8
C11orf54-201ENST00000331239 KCTD13Q8WZ19 329 aa10.03□□□□□ -0.8
C11orf54-201ENST00000331239 GPR62Q9BZJ7 368 aa10.03□□□□□ -0.8
C11orf54-201ENST00000331239 NAGPAQ9UK23 515 aa10.03□□□□□ -0.8
C11orf54-201ENST00000331239 STRIP2Q9ULQ0 834 aa10.03□□□□□ -0.8
C11orf54-201ENST00000331239 DNAH12Q6ZR08 3092 aa10.03□□□□□ -0.8
C11orf54-201ENST00000331239 PTPRDP23468 1912 aa10.03□□□□□ -0.8
C11orf54-201ENST00000331239 A0A0A6YYK5 440 aaPredicted RBP10.03□□□□□ -0.8
C11orf54-201ENST00000331239 LILRB3O75022 631 aa10.03□□□□□ -0.8
C11orf54-201ENST00000331239 FGF18O76093 207 aa10.03□□□□□ -0.8
C11orf54-201ENST00000331239 CALB1P05937 261 aa10.03□□□□□ -0.8
C11orf54-201ENST00000331239 URODP06132 367 aa10.03□□□□□ -0.8
C11orf54-201ENST00000331239 UNGP13051 313 aaPredicted RBP10.03□□□□□ -0.8
C11orf54-201ENST00000331239 PRLRP16471 622 aa10.03□□□□□ -0.8
C11orf54-201ENST00000331239 GABRB2P47870 512 aa10.03□□□□□ -0.8
C11orf54-201ENST00000331239 C9orf50Q5SZB4 431 aa10.03□□□□□ -0.8
C11orf54-201ENST00000331239 SCARA3Q6AZY7 606 aa10.03□□□□□ -0.8
C11orf54-201ENST00000331239 ACAD10Q6JQN1 1059 aa10.03□□□□□ -0.8
C11orf54-201ENST00000331239 LNX1Q8TBB1 728 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms