RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 RHOT2Q8IXI1 618 aa16.72■□□□□ 0.27
PDGFB-201ENST00000331163 SYN2Q92777 582 aaPredicted RBP16.72■□□□□ 0.27
PDGFB-201ENST00000331163 PLVAPQ9BX97 442 aa16.72■□□□□ 0.27
PDGFB-201ENST00000331163 SAE1Q9UBE0 346 aaPredicted RBP16.72■□□□□ 0.27
PDGFB-201ENST00000331163 DNAJB4Q9UDY4 337 aa16.72■□□□□ 0.27
PDGFB-201ENST00000331163 BARX2Q9UMQ3 279 aaPredicted RBP16.72■□□□□ 0.27
PDGFB-201ENST00000331163 RFX1P22670 979 aa16.71■□□□□ 0.27
PDGFB-201ENST00000331163 ITGA11Q9UKX5 1188 aa16.71■□□□□ 0.27
PDGFB-201ENST00000331163 COG5Q9UP83 839 aa16.71■□□□□ 0.27
PDGFB-201ENST00000331163 CCDC85CA6NKD9 419 aa16.71■□□□□ 0.27
PDGFB-201ENST00000331163 TSPY1Q01534 308 aa16.71■□□□□ 0.27
PDGFB-201ENST00000331163 CLEC16AQ2KHT3 1053 aa16.71■□□□□ 0.27
PDGFB-201ENST00000331163 OVOS1Q6IE37 1185 aa16.71■□□□□ 0.27
PDGFB-201ENST00000331163 ZC3H18Q86VM9 953 aaKnown RBP16.71■□□□□ 0.27
PDGFB-201ENST00000331163 RFX6Q8HWS3 928 aa16.71■□□□□ 0.27
PDGFB-201ENST00000331163 AUTS2Q8WXX7 1259 aa16.71■□□□□ 0.27
PDGFB-201ENST00000331163 RNPC3Q96LT9 517 aaKnown RBP16.71■□□□□ 0.27
PDGFB-201ENST00000331163 KCNK16Q96T55 309 aa16.71■□□□□ 0.27
PDGFB-201ENST00000331163 TLR10Q9BXR5 811 aa16.71■□□□□ 0.27
PDGFB-201ENST00000331163 OTOFQ9HC10 1997 aa16.71■□□□□ 0.26
PDGFB-201ENST00000331163 ITGB1P05556 798 aa16.71■□□□□ 0.26
PDGFB-201ENST00000331163 JAM2P57087 298 aa16.71■□□□□ 0.26
PDGFB-201ENST00000331163 PPP2R5DQ14738 602 aa16.71■□□□□ 0.26
PDGFB-201ENST00000331163 FAM131BQ86XD5 332 aa16.71■□□□□ 0.26
PDGFB-201ENST00000331163 MCOLN2Q8IZK6 566 aa16.71■□□□□ 0.26
PDGFB-201ENST00000331163 KIRREL3Q8IZU9 778 aa16.71■□□□□ 0.26
PDGFB-201ENST00000331163 SMG8Q8ND04 991 aaKnown RBP16.71■□□□□ 0.26
PDGFB-201ENST00000331163 TNIP3Q96KP6 325 aa16.71■□□□□ 0.26
PDGFB-201ENST00000331163 SNX27Q96L92 541 aa16.71■□□□□ 0.26
PDGFB-201ENST00000331163 PPME1Q9Y570 386 aa16.71■□□□□ 0.26
PDGFB-201ENST00000331163 ADGRA2Q96PE1 1338 aa16.7■□□□□ 0.26
PDGFB-201ENST00000331163 O00370 1275 aa16.7■□□□□ 0.26
PDGFB-201ENST00000331163 SELPP16109 830 aa16.7■□□□□ 0.26
PDGFB-201ENST00000331163 RFC1P35251 1148 aaPredicted RBP16.7■□□□□ 0.26
PDGFB-201ENST00000331163 ADIGQ0VDE8 80 aa16.7■□□□□ 0.26
PDGFB-201ENST00000331163 E2F5Q15329 346 aa16.7■□□□□ 0.26
PDGFB-201ENST00000331163 CPXM1Q96SM3 734 aa16.7■□□□□ 0.26
PDGFB-201ENST00000331163 DHX35Q9H5Z1 703 aaKnown RBP16.7■□□□□ 0.26
PDGFB-201ENST00000331163 HEXIM1O94992 359 aaKnown RBP16.7■□□□□ 0.26
PDGFB-201ENST00000331163 TMEM253P0C7T8 217 aa16.7■□□□□ 0.26
PDGFB-201ENST00000331163 CSF2RAP15509 400 aa16.7■□□□□ 0.26
PDGFB-201ENST00000331163 AGMOQ6ZNB7 445 aa16.7■□□□□ 0.26
PDGFB-201ENST00000331163 MIB1Q86YT6 1006 aa16.7■□□□□ 0.26
PDGFB-201ENST00000331163 TSEN2Q8NCE0 465 aaKnown RBP16.7■□□□□ 0.26
PDGFB-201ENST00000331163 CLEC4CQ8WTT0 213 aa16.7■□□□□ 0.26
PDGFB-201ENST00000331163 GPR88Q9GZN0 384 aa16.7■□□□□ 0.26
PDGFB-201ENST00000331163 SLC38A7Q9NVC3 462 aa16.7■□□□□ 0.26
PDGFB-201ENST00000331163 E7EVH7 732 aa16.69■□□□□ 0.26
PDGFB-201ENST00000331163 EIF3HO15372 352 aaKnown RBP eCLIP16.69■□□□□ 0.26
PDGFB-201ENST00000331163 PRPSAP2O60256 369 aa16.69■□□□□ 0.26
PDGFB-201ENST00000331163 OPA1O60313 960 aa16.69■□□□□ 0.26
PDGFB-201ENST00000331163 CABYRO75952 493 aa16.69■□□□□ 0.26
PDGFB-201ENST00000331163 NNTQ13423 1086 aa16.69■□□□□ 0.26
PDGFB-201ENST00000331163 BTG3Q14201 252 aaPredicted RBP16.69■□□□□ 0.26
PDGFB-201ENST00000331163 SLC39A12Q504Y0 691 aa16.69■□□□□ 0.26
PDGFB-201ENST00000331163 CFAP58Q5T655 872 aa16.69■□□□□ 0.26
PDGFB-201ENST00000331163 SPATA2LQ8IUW3 424 aaPredicted RBP16.69■□□□□ 0.26
PDGFB-201ENST00000331163 ATAD1Q8NBU5 361 aa16.69■□□□□ 0.26
PDGFB-201ENST00000331163 CFAP57Q96MR6 1250 aa16.69■□□□□ 0.26
PDGFB-201ENST00000331163 SLITRK6Q9H5Y7 841 aa16.69■□□□□ 0.26
PDGFB-201ENST00000331163 PTPRHQ9HD43 1115 aa16.69■□□□□ 0.26
PDGFB-201ENST00000331163 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.69■□□□□ 0.26
PDGFB-201ENST00000331163 MYBPHLA2RUH7 354 aa16.69■□□□□ 0.26
PDGFB-201ENST00000331163 MBLAC1A4D2B0 266 aaPredicted RBP16.69■□□□□ 0.26
PDGFB-201ENST00000331163 PGRMC1O00264 195 aaKnown RBP16.69■□□□□ 0.26
PDGFB-201ENST00000331163 SDC4P31431 198 aa16.69■□□□□ 0.26
PDGFB-201ENST00000331163 C1orf228Q6PIY5 440 aa16.69■□□□□ 0.26
PDGFB-201ENST00000331163 THEM5Q8N1Q8 247 aa16.69■□□□□ 0.26
PDGFB-201ENST00000331163 HHIPL1Q96JK4 782 aa16.69■□□□□ 0.26
PDGFB-201ENST00000331163 SYT15Q9BQS2 421 aa16.69■□□□□ 0.26
PDGFB-201ENST00000331163 ADAM33Q9BZ11 813 aa16.69■□□□□ 0.26
PDGFB-201ENST00000331163 PARVAQ9NVD7 372 aa16.69■□□□□ 0.26
PDGFB-201ENST00000331163 PIGRP01833 764 aa16.69■□□□□ 0.26
PDGFB-201ENST00000331163 ALDH2P05091 517 aa16.69■□□□□ 0.26
PDGFB-201ENST00000331163 SRGAP2BP0DMP2 458 aa16.69■□□□□ 0.26
PDGFB-201ENST00000331163 ASPAP45381 313 aa16.69■□□□□ 0.26
PDGFB-201ENST00000331163 YWHAHQ04917 246 aaPredicted RBP16.69■□□□□ 0.26
PDGFB-201ENST00000331163 RWDD4Q6NW29 188 aaKnown RBP16.69■□□□□ 0.26
PDGFB-201ENST00000331163 PRUNE1Q86TP1 453 aa16.69■□□□□ 0.26
PDGFB-201ENST00000331163 SPATA4Q8NEY3 305 aa16.69■□□□□ 0.26
PDGFB-201ENST00000331163 JOSD2Q8TAC2 188 aa16.69■□□□□ 0.26
PDGFB-201ENST00000331163 NFU1Q9UMS0 254 aa16.69■□□□□ 0.26
PDGFB-201ENST00000331163 MOXD2PA6NHM9 499 aa16.68■□□□□ 0.26
PDGFB-201ENST00000331163 GOLGA8MH3BSY2 632 aa16.68■□□□□ 0.26
PDGFB-201ENST00000331163 NDUFV1P49821 464 aa16.68■□□□□ 0.26
PDGFB-201ENST00000331163 RAD23BP54727 409 aa16.68■□□□□ 0.26
PDGFB-201ENST00000331163 SOWAHAQ2M3V2 549 aa16.68■□□□□ 0.26
PDGFB-201ENST00000331163 CTXN3Q4LDR2 81 aa16.68■□□□□ 0.26
PDGFB-201ENST00000331163 TIGD5Q53EQ6 642 aa16.68■□□□□ 0.26
PDGFB-201ENST00000331163 CCNYQ8ND76 341 aa16.68■□□□□ 0.26
PDGFB-201ENST00000331163 GIPC2Q8TF65 315 aa16.68■□□□□ 0.26
PDGFB-201ENST00000331163 TRIM51Q9BSJ1 452 aa16.68■□□□□ 0.26
PDGFB-201ENST00000331163 SNX24Q9Y343 169 aa16.68■□□□□ 0.26
PDGFB-201ENST00000331163 NCAM1P13591 858 aa16.68■□□□□ 0.26
PDGFB-201ENST00000331163 RWDD2BP57060 319 aa16.68■□□□□ 0.26
PDGFB-201ENST00000331163 NFIL3Q16649 462 aa16.68■□□□□ 0.26
PDGFB-201ENST00000331163 PTPN20Q4JDL3 420 aa16.68■□□□□ 0.26
PDGFB-201ENST00000331163 NOMO2Q5JPE7 1267 aa16.68■□□□□ 0.26
PDGFB-201ENST00000331163 SH3PXD2AQ5TCZ1 1133 aa16.68■□□□□ 0.26
PDGFB-201ENST00000331163 ZNF365Q70YC5 407 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms