RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 TRIM50Q86XT4 487 aa18.21■□□□□ 0.51
PTP4A3-201ENST00000329397 UBR7Q8N806 425 aa18.21■□□□□ 0.51
PTP4A3-201ENST00000329397 FAXDC2Q96IV6 333 aa18.21■□□□□ 0.51
PTP4A3-201ENST00000329397 FOXP3Q9BZS1 431 aa18.21■□□□□ 0.51
PTP4A3-201ENST00000329397 METTL5Q9NRN9 209 aaKnown RBP18.21■□□□□ 0.51
PTP4A3-201ENST00000329397 XPO7Q9UIA9 1087 aaKnown RBP18.21■□□□□ 0.51
PTP4A3-201ENST00000329397 MGAMO43451 1857 aa18.21■□□□□ 0.51
PTP4A3-201ENST00000329397 SPATA31C2B4DYI2 1134 aa18.21■□□□□ 0.51
PTP4A3-201ENST00000329397 DCTN3O75935 186 aa18.21■□□□□ 0.51
PTP4A3-201ENST00000329397 SH3PXD2AQ5TCZ1 1133 aa18.21■□□□□ 0.51
PTP4A3-201ENST00000329397 PALM2Q8IXS6 379 aa18.21■□□□□ 0.51
PTP4A3-201ENST00000329397 RTKN2Q8IZC4 609 aa18.21■□□□□ 0.51
PTP4A3-201ENST00000329397 MAB21L3Q8N8X9 362 aa18.21■□□□□ 0.51
PTP4A3-201ENST00000329397 AGBL3Q8NEM8 1001 aa18.21■□□□□ 0.51
PTP4A3-201ENST00000329397 PRPF31Q8WWY3 499 aaKnown RBP18.21■□□□□ 0.51
PTP4A3-201ENST00000329397 TTC17Q96AE7 1141 aa18.21■□□□□ 0.51
PTP4A3-201ENST00000329397 SPDL1Q96EA4 605 aa18.21■□□□□ 0.51
PTP4A3-201ENST00000329397 RNPEPL1Q9HAU8 725 aa18.21■□□□□ 0.51
PTP4A3-201ENST00000329397 DRG1Q9Y295 367 aaKnown RBP18.21■□□□□ 0.51
PTP4A3-201ENST00000329397 H0YCG3 227 aa18.2■□□□□ 0.5
PTP4A3-201ENST00000329397 KRT3P12035 628 aa18.2■□□□□ 0.5
PTP4A3-201ENST00000329397 CLNKQ7Z7G1 428 aa18.2■□□□□ 0.5
PTP4A3-201ENST00000329397 RFX6Q8HWS3 928 aa18.2■□□□□ 0.5
PTP4A3-201ENST00000329397 NAT8LQ8N9F0 302 aa18.2■□□□□ 0.5
PTP4A3-201ENST00000329397 WRNIP1Q96S55 665 aa18.2■□□□□ 0.5
PTP4A3-201ENST00000329397 NIF3L1Q9GZT8 377 aa18.2■□□□□ 0.5
PTP4A3-201ENST00000329397 HMGXB4Q9UGU5 601 aa18.2■□□□□ 0.5
PTP4A3-201ENST00000329397 PARP14Q460N5 1801 aa18.2■□□□□ 0.5
PTP4A3-201ENST00000329397 PSMC1P62191 440 aaKnown RBP18.2■□□□□ 0.5
PTP4A3-201ENST00000329397 TRPC3Q13507 836 aa18.2■□□□□ 0.5
PTP4A3-201ENST00000329397 PIGHQ14442 188 aaPredicted RBP18.2■□□□□ 0.5
PTP4A3-201ENST00000329397 FAXCQ5TGI0 409 aa18.2■□□□□ 0.5
PTP4A3-201ENST00000329397 ANKRD23Q86SG2 305 aa18.2■□□□□ 0.5
PTP4A3-201ENST00000329397 TTC7BQ86TV6 843 aa18.2■□□□□ 0.5
PTP4A3-201ENST00000329397 BRSK2Q8IWQ3 736 aa18.2■□□□□ 0.5
PTP4A3-201ENST00000329397 PPIL6Q8IXY8 311 aa18.2■□□□□ 0.5
PTP4A3-201ENST00000329397 TMEM192Q8IY95 271 aa18.2■□□□□ 0.5
PTP4A3-201ENST00000329397 ZNF276Q8N554 614 aa18.2■□□□□ 0.5
PTP4A3-201ENST00000329397 ATP11CQ8NB49 1132 aa18.2■□□□□ 0.5
PTP4A3-201ENST00000329397 MTMR14Q8NCE2 650 aa18.2■□□□□ 0.5
PTP4A3-201ENST00000329397 FAM111AQ96PZ2 611 aa18.2■□□□□ 0.5
PTP4A3-201ENST00000329397 CPXM1Q96SM3 734 aa18.2■□□□□ 0.5
PTP4A3-201ENST00000329397 CYLDQ9NQC7 956 aa18.2■□□□□ 0.5
PTP4A3-201ENST00000329397 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.2■□□□□ 0.57e-6■■□□□ 11.9
PTP4A3-201ENST00000329397 SNCAIPQ9Y6H5 919 aa18.2■□□□□ 0.5
PTP4A3-201ENST00000329397 CSDE1O75534 798 aaKnown RBP18.19■□□□□ 0.5
PTP4A3-201ENST00000329397 LDHAP00338 332 aaKnown RBP18.19■□□□□ 0.5
PTP4A3-201ENST00000329397 PDHA1P08559 390 aa18.19■□□□□ 0.5
PTP4A3-201ENST00000329397 TPBGLP0DKB5 382 aa18.19■□□□□ 0.5
PTP4A3-201ENST00000329397 NEFHP12036 1026 aa18.19■□□□□ 0.5
PTP4A3-201ENST00000329397 ARL4CP56559 192 aa18.19■□□□□ 0.5
PTP4A3-201ENST00000329397 SARNPP82979 210 aaKnown RBP18.19■□□□□ 0.5
PTP4A3-201ENST00000329397 ZNF699Q32M78 642 aa18.19■□□□□ 0.5
PTP4A3-201ENST00000329397 GNPTABQ3T906 1256 aa18.19■□□□□ 0.5
PTP4A3-201ENST00000329397 C1QTNF12Q5T7M4 302 aa18.19■□□□□ 0.5
PTP4A3-201ENST00000329397 RFX8Q6ZV50 586 aa18.19■□□□□ 0.5
PTP4A3-201ENST00000329397 AGGF1Q8N302 714 aaeCLIP18.19■□□□□ 0.5
PTP4A3-201ENST00000329397 MZB1Q8WU39 189 aa18.19■□□□□ 0.5
PTP4A3-201ENST00000329397 DCAKDQ8WVC6 231 aa18.19■□□□□ 0.5
PTP4A3-201ENST00000329397 SERAC1Q96JX3 654 aa18.19■□□□□ 0.5
PTP4A3-201ENST00000329397 PCYT2Q99447 389 aa18.19■□□□□ 0.5
PTP4A3-201ENST00000329397 SYNCQ9H7C4 482 aa18.19■□□□□ 0.5
PTP4A3-201ENST00000329397 ARL8BQ9NVJ2 186 aa18.19■□□□□ 0.5
PTP4A3-201ENST00000329397 SLC24A2Q9UI40 661 aa18.19■□□□□ 0.5
PTP4A3-201ENST00000329397 MAFBQ9Y5Q3 323 aaPredicted RBP18.19■□□□□ 0.5
PTP4A3-201ENST00000329397 PEX19P40855 299 aa18.19■□□□□ 0.5
PTP4A3-201ENST00000329397 ELK3P41970 407 aa18.19■□□□□ 0.5
PTP4A3-201ENST00000329397 SLC8A3P57103 927 aa18.19■□□□□ 0.5
PTP4A3-201ENST00000329397 DSTYKQ6XUX3 929 aa18.19■□□□□ 0.5
PTP4A3-201ENST00000329397 RGS9BPQ6ZS82 235 aa18.19■□□□□ 0.5
PTP4A3-201ENST00000329397 TRIM56Q9BRZ2 755 aaKnown RBP18.19■□□□□ 0.5
PTP4A3-201ENST00000329397 SENP1Q9P0U3 644 aa18.19■□□□□ 0.5
PTP4A3-201ENST00000329397 HEY2Q9UBP5 337 aa18.19■□□□□ 0.5
PTP4A3-201ENST00000329397 RLFQ13129 1914 aa18.19■□□□□ 0.5
PTP4A3-201ENST00000329397 FAM189A1O60320 539 aa18.19■□□□□ 0.5
PTP4A3-201ENST00000329397 GNAZP19086 355 aa18.19■□□□□ 0.5
PTP4A3-201ENST00000329397 KDELR1P24390 212 aa18.19■□□□□ 0.5
PTP4A3-201ENST00000329397 CALRP27797 417 aaKnown RBP18.19■□□□□ 0.5
PTP4A3-201ENST00000329397 SERPINB3P29508 390 aa18.19■□□□□ 0.5
PTP4A3-201ENST00000329397 CTC1Q2NKJ3 1217 aa18.19■□□□□ 0.5
PTP4A3-201ENST00000329397 LRRC38Q5VT99 294 aa18.19■□□□□ 0.5
PTP4A3-201ENST00000329397 CEP128Q6ZU80 1094 aa18.19■□□□□ 0.5
PTP4A3-201ENST00000329397 STK32AQ8WU08 396 aa18.19■□□□□ 0.5
PTP4A3-201ENST00000329397 NAF1Q96HR8 494 aaKnown RBP18.19■□□□□ 0.5
PTP4A3-201ENST00000329397 TRIM6Q9C030 488 aaPredicted RBP18.19■□□□□ 0.5
PTP4A3-201ENST00000329397 ASCC2Q9H1I8 757 aaPredicted RBP18.19■□□□□ 0.5
PTP4A3-201ENST00000329397 ARMCX1Q9P291 453 aa18.19■□□□□ 0.5
PTP4A3-201ENST00000329397 HACL1Q9UJ83 578 aa18.19■□□□□ 0.5
PTP4A3-201ENST00000329397 AFG3L2Q9Y4W6 797 aa18.19■□□□□ 0.5
PTP4A3-201ENST00000329397 B4GALT5O43286 388 aa18.18■□□□□ 0.5
PTP4A3-201ENST00000329397 GRAP2O75791 330 aa18.18■□□□□ 0.5
PTP4A3-201ENST00000329397 PIGRP01833 764 aa18.18■□□□□ 0.5
PTP4A3-201ENST00000329397 RBP3P10745 1247 aa18.18■□□□□ 0.5
PTP4A3-201ENST00000329397 BGNP21810 368 aa18.18■□□□□ 0.5
PTP4A3-201ENST00000329397 KCNA3P22001 575 aa18.18■□□□□ 0.5
PTP4A3-201ENST00000329397 CALB2P22676 271 aa18.18■□□□□ 0.5
PTP4A3-201ENST00000329397 ASPAP45381 313 aa18.18■□□□□ 0.5
PTP4A3-201ENST00000329397 CPA2P48052 419 aa18.18■□□□□ 0.5
PTP4A3-201ENST00000329397 EIF3EP60228 445 aaKnown RBP18.18■□□□□ 0.5
PTP4A3-201ENST00000329397 PARP6Q2NL67 630 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms