RNA–Protein interactions for RNA: ENST00000328392.10

SKP1-201, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-201ENST00000328392 ELF2Q15723 593 aa4.72□□□□□ -1.65
SKP1-201ENST00000328392 SPDYE7PQ495Y7 208 aa4.72□□□□□ -1.65
SKP1-201ENST00000328392 ARHGAP40Q5TG30 622 aa4.72□□□□□ -1.65
SKP1-201ENST00000328392 GPR149Q86SP6 731 aa4.72□□□□□ -1.65
SKP1-201ENST00000328392 LCORLQ8N3X6 602 aa4.72□□□□□ -1.65
SKP1-201ENST00000328392 ENAHQ8N8S7 591 aaPredicted RBP4.72□□□□□ -1.65
SKP1-201ENST00000328392 NACC2Q96BF6 587 aa4.72□□□□□ -1.65
SKP1-201ENST00000328392 ZG16BQ96DA0 208 aa4.72□□□□□ -1.65
SKP1-201ENST00000328392 C18orf8Q96DM3 657 aa4.72□□□□□ -1.65
SKP1-201ENST00000328392 ZSCAN32Q9NX65 697 aa4.72□□□□□ -1.65
SKP1-201ENST00000328392 MAN2B2Q9Y2E5 1009 aa4.72□□□□□ -1.65
SKP1-201ENST00000328392 RGS10O43665 173 aa4.71□□□□□ -1.66
SKP1-201ENST00000328392 NBNO60934 754 aa4.71□□□□□ -1.66
SKP1-201ENST00000328392 CDKL5O76039 1030 aa4.71□□□□□ -1.66
SKP1-201ENST00000328392 FGF18O76093 207 aa4.71□□□□□ -1.66
SKP1-201ENST00000328392 PDHA1P08559 390 aa4.71□□□□□ -1.66
SKP1-201ENST00000328392 EGR2P11161 476 aaPredicted RBP4.71□□□□□ -1.66
SKP1-201ENST00000328392 ITGAMP11215 1152 aa4.71□□□□□ -1.66
SKP1-201ENST00000328392 IL6STP40189 918 aaPredicted RBP4.71□□□□□ -1.66
SKP1-201ENST00000328392 PTDSS1P48651 473 aaKnown RBP4.71□□□□□ -1.66
SKP1-201ENST00000328392 HSPA7P48741 367 aa4.71□□□□□ -1.66
SKP1-201ENST00000328392 NDUFV1P49821 464 aa4.71□□□□□ -1.66
SKP1-201ENST00000328392 PRKAG1P54619 331 aa4.71□□□□□ -1.66
SKP1-201ENST00000328392 NANOS3P60323 173 aaKnown RBP4.71□□□□□ -1.66
SKP1-201ENST00000328392 SLC29A2Q14542 456 aa4.71□□□□□ -1.66
SKP1-201ENST00000328392 STARD3Q14849 445 aa4.71□□□□□ -1.66
SKP1-201ENST00000328392 SLC35G1Q2M3R5 365 aa4.71□□□□□ -1.66
SKP1-201ENST00000328392 GRAMD1BQ3KR37 738 aa4.71□□□□□ -1.66
SKP1-201ENST00000328392 ZIK1Q3SY52 487 aaPredicted RBP4.71□□□□□ -1.66
SKP1-201ENST00000328392 FAM83BQ5T0W9 1011 aa4.71□□□□□ -1.66
SKP1-201ENST00000328392 RBM20Q5T481 1227 aaKnown RBP4.71□□□□□ -1.66
SKP1-201ENST00000328392 VPS53Q5VIR6 699 aa4.71□□□□□ -1.66
SKP1-201ENST00000328392 ANO1Q5XXA6 986 aa4.71□□□□□ -1.66
SKP1-201ENST00000328392 CCDC174Q6PII3 467 aa4.71□□□□□ -1.66
SKP1-201ENST00000328392 FBXO38Q6PIJ6 1188 aa4.71□□□□□ -1.66
SKP1-201ENST00000328392 CLNKQ7Z7G1 428 aa4.71□□□□□ -1.66
SKP1-201ENST00000328392 MYLK4Q86YV6 388 aaPredicted RBP4.71□□□□□ -1.66
SKP1-201ENST00000328392 YAF2Q8IY57 180 aa4.71□□□□□ -1.66
SKP1-201ENST00000328392 SYTL1Q8IYJ3 562 aa4.71□□□□□ -1.66
SKP1-201ENST00000328392 TMEM171Q8WVE6 324 aa4.71□□□□□ -1.66
SKP1-201ENST00000328392 LINC00476Q8WZB0 136 aa4.71□□□□□ -1.66
SKP1-201ENST00000328392 MUL1Q969V5 352 aa4.71□□□□□ -1.66
SKP1-201ENST00000328392 MSLNLQ96KJ4 702 aa4.71□□□□□ -1.66
SKP1-201ENST00000328392 TOR3AQ9H497 397 aa4.71□□□□□ -1.66
SKP1-201ENST00000328392 MYH16Q9H6N6 1097 aa4.71□□□□□ -1.66
SKP1-201ENST00000328392 SERTAD3Q9UJW9 196 aa4.71□□□□□ -1.66
SKP1-201ENST00000328392 A0A1W2PPC4 97 aa4.7□□□□□ -1.66
SKP1-201ENST00000328392 MBD3L4A6NDZ8 208 aaPredicted RBP4.7□□□□□ -1.66
SKP1-201ENST00000328392 MBD3L3A6NE82 208 aaPredicted RBP4.7□□□□□ -1.66
SKP1-201ENST00000328392 LMNAP02545 664 aaKnown RBP4.7□□□□□ -1.66
SKP1-201ENST00000328392 ATXN1LP0C7T5 689 aaKnown RBP4.7□□□□□ -1.66
SKP1-201ENST00000328392 TXNP10599 105 aaKnown RBP4.7□□□□□ -1.66
SKP1-201ENST00000328392 TPH1P17752 444 aa4.7□□□□□ -1.66
SKP1-201ENST00000328392 GATA3P23771 443 aa4.7□□□□□ -1.66
SKP1-201ENST00000328392 EEF1GP26641 437 aaKnown RBP4.7□□□□□ -1.66
SKP1-201ENST00000328392 TECP42680 631 aa4.7□□□□□ -1.66
SKP1-201ENST00000328392 NPTX2P47972 431 aa4.7□□□□□ -1.66
SKP1-201ENST00000328392 SEC24CP53992 1094 aa4.7□□□□□ -1.66
SKP1-201ENST00000328392 BTKQ06187 659 aa4.7□□□□□ -1.66
SKP1-201ENST00000328392 EIF2B5Q13144 721 aaKnown RBP4.7□□□□□ -1.66
SKP1-201ENST00000328392 CYP2A13Q16696 494 aa4.7□□□□□ -1.66
SKP1-201ENST00000328392 MPEG1Q2M385 716 aa4.7□□□□□ -1.66
SKP1-201ENST00000328392 PTCHD3Q3KNS1 767 aa4.7□□□□□ -1.66
SKP1-201ENST00000328392 MGAT5BQ3V5L5 792 aa4.7□□□□□ -1.66
SKP1-201ENST00000328392 RGS7BPQ6MZT1 257 aaPredicted RBP4.7□□□□□ -1.66
SKP1-201ENST00000328392 OLFML1Q6UWY5 402 aa4.7□□□□□ -1.66
SKP1-201ENST00000328392 TSHZ1Q6ZSZ6 1077 aa4.7□□□□□ -1.66
SKP1-201ENST00000328392 ADGRG5Q8IZF4 528 aa4.7□□□□□ -1.66
SKP1-201ENST00000328392 SUPT20HQ8NEM7 779 aa4.7□□□□□ -1.66
SKP1-201ENST00000328392 SLC30A5Q8TAD4 765 aa4.7□□□□□ -1.66
SKP1-201ENST00000328392 POC1BQ8TC44 478 aa4.7□□□□□ -1.66
SKP1-201ENST00000328392 BPIFB1Q8TDL5 484 aa4.7□□□□□ -1.66
SKP1-201ENST00000328392 SNX19Q92543 992 aa4.7□□□□□ -1.66
SKP1-201ENST00000328392 PPP2R3CQ969Q6 453 aa4.7□□□□□ -1.66
SKP1-201ENST00000328392 MOGAT1Q96PD6 335 aa4.7□□□□□ -1.66
SKP1-201ENST00000328392 PPP1R9BQ96SB3 815 aa4.7□□□□□ -1.66
SKP1-201ENST00000328392 HEPHQ9BQS7 1158 aa4.7□□□□□ -1.66
SKP1-201ENST00000328392 WDR12Q9GZL7 423 aaKnown RBP4.7□□□□□ -1.66
SKP1-201ENST00000328392 SYNPO2LQ9H987 977 aa4.7□□□□□ -1.66
SKP1-201ENST00000328392 SERHLQ9NQF3 203 aa4.7□□□□□ -1.66
SKP1-201ENST00000328392 TRMT13Q9NUP7 481 aaKnown RBP4.7□□□□□ -1.66
SKP1-201ENST00000328392 KCNE5Q9UJ90 142 aa4.7□□□□□ -1.66
SKP1-201ENST00000328392 SHOC2Q9UQ13 582 aa4.7□□□□□ -1.66
SKP1-201ENST00000328392 SALL3Q9BXA9 1300 aa4.7□□□□□ -1.66
SKP1-201ENST00000328392 POLR2AP24928 1970 aaKnown RBP4.69□□□□□ -1.66
SKP1-201ENST00000328392 TRGV11A0A075B6L2 103 aa4.69□□□□□ -1.66
SKP1-201ENST00000328392 A0A0B4J269 797 aa4.69□□□□□ -1.66
SKP1-201ENST00000328392 LOC102724159A0A0B4J2E5 919 aa4.69□□□□□ -1.66
SKP1-201ENST00000328392 PRAMEF33A0A0G2JMD5 474 aa4.69□□□□□ -1.66
SKP1-201ENST00000328392 LOC102723971A0A1B0GUV8 181 aa4.69□□□□□ -1.66
SKP1-201ENST00000328392 FAM234BA2RU67 622 aa4.69□□□□□ -1.66
SKP1-201ENST00000328392 MYADML2A6NDP7 307 aa4.69□□□□□ -1.66
SKP1-201ENST00000328392 PODXLO00592 558 aa4.69□□□□□ -1.66
SKP1-201ENST00000328392 PRAMEF10O60809 474 aa4.69□□□□□ -1.66
SKP1-201ENST00000328392 SRGAP2O75044 1071 aa4.69□□□□□ -1.66
SKP1-201ENST00000328392 RHOBTB3O94955 611 aa4.69□□□□□ -1.66
SKP1-201ENST00000328392 FOSP01100 380 aaPredicted RBP4.69□□□□□ -1.66
SKP1-201ENST00000328392 XRCC6P12956 609 aaKnown RBP eCLIP4.69□□□□□ -1.66
SKP1-201ENST00000328392 ACVR2AP27037 513 aa4.69□□□□□ -1.66
SKP1-201ENST00000328392 IL1R2P27930 398 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms