RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 HSD17B4P51659 736 aa17.06■□□□□ 0.32
SMAD3-201ENST00000327367 NCF4Q15080 339 aa17.06■□□□□ 0.32
SMAD3-201ENST00000327367 RIPOR1Q6ZS17 1223 aa17.06■□□□□ 0.32
SMAD3-201ENST00000327367 SLC10A4Q96EP9 437 aa17.06■□□□□ 0.32
SMAD3-201ENST00000327367 BTBD10Q9BSF8 475 aa17.06■□□□□ 0.32
SMAD3-201ENST00000327367 ZNF624Q9P2J8 865 aaPredicted RBP17.06■□□□□ 0.32
SMAD3-201ENST00000327367 KRT6BP04259 564 aa17.06■□□□□ 0.32
SMAD3-201ENST00000327367 KRT6CP48668 564 aa17.06■□□□□ 0.32
SMAD3-201ENST00000327367 CDC16Q13042 620 aa17.06■□□□□ 0.32
SMAD3-201ENST00000327367 KRT73Q86Y46 540 aa17.06■□□□□ 0.32
SMAD3-201ENST00000327367 RNFT2Q96EX2 444 aa17.06■□□□□ 0.32
SMAD3-201ENST00000327367 MRPL4Q9BYD3 311 aaKnown RBP17.06■□□□□ 0.32
SMAD3-201ENST00000327367 GPRC5DQ9NZD1 345 aa17.06■□□□□ 0.32
SMAD3-201ENST00000327367 LEMD3Q9Y2U8 911 aa17.06■□□□□ 0.32
SMAD3-201ENST00000327367 ZNF521Q96K83 1311 aa17.06■□□□□ 0.32
SMAD3-201ENST00000327367 MYMKA6NI61 221 aa17.06■□□□□ 0.32
SMAD3-201ENST00000327367 CNOT3O75175 753 aaKnown RBP17.06■□□□□ 0.32
SMAD3-201ENST00000327367 GSTM1P09488 218 aa17.06■□□□□ 0.32
SMAD3-201ENST00000327367 ABATP80404 500 aa17.06■□□□□ 0.32
SMAD3-201ENST00000327367 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.06■□□□□ 0.32
SMAD3-201ENST00000327367 C10orf53Q8N6V4 93 aa17.06■□□□□ 0.32
SMAD3-201ENST00000327367 JADE3Q92613 823 aa17.06■□□□□ 0.32
SMAD3-201ENST00000327367 ZSCAN5CA6NGD5 496 aaPredicted RBP17.06■□□□□ 0.32
SMAD3-201ENST00000327367 GLI1P08151 1106 aa17.06■□□□□ 0.32
SMAD3-201ENST00000327367 NCKAP1LP55160 1127 aa17.06■□□□□ 0.32
SMAD3-201ENST00000327367 BMPR2Q13873 1038 aa17.06■□□□□ 0.32
SMAD3-201ENST00000327367 GRM4Q14833 912 aa17.06■□□□□ 0.32
SMAD3-201ENST00000327367 COPS7BQ9H9Q2 264 aaPredicted RBP17.06■□□□□ 0.32
SMAD3-201ENST00000327367 MAPK7Q13164 816 aa17.05■□□□□ 0.32
SMAD3-201ENST00000327367 NR1D2Q14995 579 aa17.05■□□□□ 0.32
SMAD3-201ENST00000327367 ZRANB3Q5FWF4 1079 aa17.05■□□□□ 0.32
SMAD3-201ENST00000327367 HS6ST3Q8IZP7 471 aa17.05■□□□□ 0.32
SMAD3-201ENST00000327367 SRBD1Q8N5C6 995 aaKnown RBP17.05■□□□□ 0.32
SMAD3-201ENST00000327367 PLEKHG4BQ96PX9 1271 aa17.05■□□□□ 0.32
SMAD3-201ENST00000327367 L2HGDHQ9H9P8 463 aa17.05■□□□□ 0.32
SMAD3-201ENST00000327367 LRCH1Q9Y2L9 728 aa17.05■□□□□ 0.32
SMAD3-201ENST00000327367 KHDRBS2Q5VWX1 349 aaKnown RBP17.05■□□□□ 0.32
SMAD3-201ENST00000327367 SEPT1Q8WYJ6 367 aa17.05■□□□□ 0.32
SMAD3-201ENST00000327367 FIG4Q92562 907 aa17.05■□□□□ 0.32
SMAD3-201ENST00000327367 TRPC7Q9HCX4 862 aa17.05■□□□□ 0.32
SMAD3-201ENST00000327367 KLHL1Q9NR64 748 aa17.05■□□□□ 0.32
SMAD3-201ENST00000327367 KLHL3Q9UH77 587 aa17.05■□□□□ 0.32
SMAD3-201ENST00000327367 STX7O15400 261 aaKnown RBP17.05■□□□□ 0.32
SMAD3-201ENST00000327367 TNFAIP8O95379 198 aa17.05■□□□□ 0.32
SMAD3-201ENST00000327367 GRIK1P39086 918 aa17.05■□□□□ 0.32
SMAD3-201ENST00000327367 CDK17Q00537 523 aa17.05■□□□□ 0.32
SMAD3-201ENST00000327367 VAC14Q08AM6 782 aa17.05■□□□□ 0.32
SMAD3-201ENST00000327367 TRAF3Q13114 568 aa17.05■□□□□ 0.32
SMAD3-201ENST00000327367 WDR93Q6P2C0 686 aa17.05■□□□□ 0.32
SMAD3-201ENST00000327367 B3GNT6Q6ZMB0 384 aa17.05■□□□□ 0.32
SMAD3-201ENST00000327367 ZNF483Q8TF39 744 aaPredicted RBP17.05■□□□□ 0.32
SMAD3-201ENST00000327367 CHID1Q9BWS9 393 aa17.05■□□□□ 0.32
SMAD3-201ENST00000327367 RAD18Q9NS91 495 aa17.05■□□□□ 0.32
SMAD3-201ENST00000327367 WDR19Q8NEZ3 1342 aa17.05■□□□□ 0.32
SMAD3-201ENST00000327367 TEX14Q8IWB6 1497 aa17.05■□□□□ 0.32
SMAD3-201ENST00000327367 ADCY6O43306 1168 aa17.05■□□□□ 0.32
SMAD3-201ENST00000327367 FKBP6O75344 327 aa17.05■□□□□ 0.32
SMAD3-201ENST00000327367 PGM3O95394 542 aa17.05■□□□□ 0.32
SMAD3-201ENST00000327367 CHI3L1P36222 383 aaPredicted RBP17.05■□□□□ 0.32
SMAD3-201ENST00000327367 HERVK_113P62684 666 aa17.05■□□□□ 0.32
SMAD3-201ENST00000327367 PIGHQ14442 188 aaPredicted RBP17.05■□□□□ 0.32
SMAD3-201ENST00000327367 PTRHD1Q6GMV3 140 aaKnown RBP17.05■□□□□ 0.32
SMAD3-201ENST00000327367 TAF2Q6P1X5 1199 aa17.05■□□□□ 0.32
SMAD3-201ENST00000327367 OR6Y1Q8NGX8 325 aa17.05■□□□□ 0.32
SMAD3-201ENST00000327367 DDX50Q9BQ39 737 aaKnown RBP17.05■□□□□ 0.32
SMAD3-201ENST00000327367 PDXKO00764 312 aa17.05■□□□□ 0.32
SMAD3-201ENST00000327367 UGP2Q16851 508 aa17.05■□□□□ 0.32
SMAD3-201ENST00000327367 DUOXA2Q1HG44 320 aa17.05■□□□□ 0.32
SMAD3-201ENST00000327367 SLC7A5P2Q9GIP4 190 aa17.05■□□□□ 0.32
SMAD3-201ENST00000327367 RABGEF1Q9UJ41 708 aa17.05■□□□□ 0.32
SMAD3-201ENST00000327367 PRDX5P30044 214 aa17.04■□□□□ 0.32
SMAD3-201ENST00000327367 TALDO1P37837 337 aa17.04■□□□□ 0.32
SMAD3-201ENST00000327367 LSM3P62310 102 aaKnown RBP17.04■□□□□ 0.32
SMAD3-201ENST00000327367 CENPCQ03188 943 aa17.04■□□□□ 0.32
SMAD3-201ENST00000327367 DGCR6Q14129 220 aa17.04■□□□□ 0.32
SMAD3-201ENST00000327367 WASHC2DQ5SRD0 308 aa17.04■□□□□ 0.32
SMAD3-201ENST00000327367 DCAF4Q8WV16 495 aa17.04■□□□□ 0.32
SMAD3-201ENST00000327367 TOPORSQ9NS56 1045 aaPredicted RBP17.04■□□□□ 0.32
SMAD3-201ENST00000327367 MYRFQ9Y2G1 1151 aa17.04■□□□□ 0.32
SMAD3-201ENST00000327367 PDS5AQ29RF7 1337 aaKnown RBP17.04■□□□□ 0.32
SMAD3-201ENST00000327367 RAD51BO15315 384 aa17.04■□□□□ 0.32
SMAD3-201ENST00000327367 SLC16A3O15427 465 aaKnown RBP17.04■□□□□ 0.32
SMAD3-201ENST00000327367 BAIAP3O94812 1187 aa17.04■□□□□ 0.32
SMAD3-201ENST00000327367 FAM153BP0C7A2 387 aa17.04■□□□□ 0.32
SMAD3-201ENST00000327367 RBP3P10745 1247 aa17.04■□□□□ 0.32
SMAD3-201ENST00000327367 SERPINH1P50454 418 aaKnown RBP17.04■□□□□ 0.32
SMAD3-201ENST00000327367 FAM153CQ494X1 144 aa17.04■□□□□ 0.32
SMAD3-201ENST00000327367 TRPC4APQ8TEL6 797 aa17.04■□□□□ 0.32
SMAD3-201ENST00000327367 AGAP11Q8TF27 550 aa17.04■□□□□ 0.32
SMAD3-201ENST00000327367 DSEQ9UL01 958 aa17.04■□□□□ 0.32
SMAD3-201ENST00000327367 ADGRL2O95490 1459 aa17.04■□□□□ 0.32
SMAD3-201ENST00000327367 CCDC130P13994 396 aa17.04■□□□□ 0.32
SMAD3-201ENST00000327367 RAD23AP54725 363 aa17.04■□□□□ 0.32
SMAD3-201ENST00000327367 CCNIQ14094 377 aa17.04■□□□□ 0.32
SMAD3-201ENST00000327367 AGKQ53H12 422 aa17.04■□□□□ 0.32
SMAD3-201ENST00000327367 SLC13A5Q86YT5 568 aaPredicted RBP17.04■□□□□ 0.32
SMAD3-201ENST00000327367 SYNE4Q8N205 404 aa17.04■□□□□ 0.32
SMAD3-201ENST00000327367 WDR36Q8NI36 951 aaKnown RBP17.04■□□□□ 0.32
SMAD3-201ENST00000327367 TADA1Q96BN2 335 aa17.04■□□□□ 0.32
SMAD3-201ENST00000327367 PAFAH2Q99487 392 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms