RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 FAM20BO75063 409 aa8.2□□□□□ -1.1
CIITA-201ENST00000324288 SRP54P61011 504 aaKnown RBP8.2□□□□□ -1.1
CIITA-201ENST00000324288 NCOA4Q13772 614 aa8.2□□□□□ -1.1
CIITA-201ENST00000324288 EPHA10Q5JZY3 1008 aa8.2□□□□□ -1.1
CIITA-201ENST00000324288 DGKKQ5KSL6 1271 aa8.2□□□□□ -1.1
CIITA-201ENST00000324288 MTHFD1LQ6UB35 978 aa8.2□□□□□ -1.1
CIITA-201ENST00000324288 RNF19BQ6ZMZ0 732 aa8.2□□□□□ -1.1
CIITA-201ENST00000324288 P3H2Q8IVL5 708 aa8.2□□□□□ -1.1
CIITA-201ENST00000324288 RAET1EQ8TD07 263 aa8.2□□□□□ -1.1
CIITA-201ENST00000324288 RBBP8Q99708 897 aa8.2□□□□□ -1.1
CIITA-201ENST00000324288 PACSIN1Q9BY11 444 aa8.2□□□□□ -1.1
CIITA-201ENST00000324288 MAN1C1Q9NR34 630 aa8.2□□□□□ -1.1
CIITA-201ENST00000324288 DCDC2Q9UHG0 476 aa8.2□□□□□ -1.1
CIITA-201ENST00000324288 PHTF1Q9UMS5 762 aa8.2□□□□□ -1.1
CIITA-201ENST00000324288 C4BPBP20851 252 aa8.19□□□□□ -1.1
CIITA-201ENST00000324288 CDC16Q13042 620 aa8.19□□□□□ -1.1
CIITA-201ENST00000324288 GOLGA7BQ2TAP0 167 aa8.19□□□□□ -1.1
CIITA-201ENST00000324288 SHCBP1Q8NEM2 672 aa8.19□□□□□ -1.1
CIITA-201ENST00000324288 DNAJC16Q9Y2G8 782 aa8.19□□□□□ -1.1
CIITA-201ENST00000324288 ZNF862O60290 1169 aa8.19□□□□□ -1.1
CIITA-201ENST00000324288 YWHABP31946 246 aaKnown RBP8.19□□□□□ -1.1
CIITA-201ENST00000324288 GRM4Q14833 912 aa8.19□□□□□ -1.1
CIITA-201ENST00000324288 TTC39BQ5VTQ0 682 aaPredicted RBP8.19□□□□□ -1.1
CIITA-201ENST00000324288 ZSWIM2Q8NEG5 633 aa8.19□□□□□ -1.1
CIITA-201ENST00000324288 TSPAN17Q96FV3 270 aa8.19□□□□□ -1.1
CIITA-201ENST00000324288 OSBPL3Q9H4L5 887 aa8.19□□□□□ -1.1
CIITA-201ENST00000324288 FANCEQ9HB96 536 aa8.19□□□□□ -1.1
CIITA-201ENST00000324288 AGAP1Q9UPQ3 857 aa8.19□□□□□ -1.1
CIITA-201ENST00000324288 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.19□□□□□ -1.1
CIITA-201ENST00000324288 CFAP99D6REC4 459 aa8.19□□□□□ -1.1
CIITA-201ENST00000324288 ALDH5A1P51649 535 aaPredicted RBP8.19□□□□□ -1.1
CIITA-201ENST00000324288 AP3B2Q13367 1082 aa8.19□□□□□ -1.1
CIITA-201ENST00000324288 ARHGEF7Q14155 803 aa8.19□□□□□ -1.1
CIITA-201ENST00000324288 PRAMEF18Q5VWM3 479 aa8.19□□□□□ -1.1
CIITA-201ENST00000324288 PGBD2Q6P3X8 592 aa8.19□□□□□ -1.1
CIITA-201ENST00000324288 SYDE1Q6ZW31 735 aaPredicted RBP8.19□□□□□ -1.1
CIITA-201ENST00000324288 OTOAQ7RTW8 1153 aa8.19□□□□□ -1.1
CIITA-201ENST00000324288 PPP1R14AQ96A00 147 aa8.19□□□□□ -1.1
CIITA-201ENST00000324288 PPP1R14BQ96C90 147 aa8.19□□□□□ -1.1
CIITA-201ENST00000324288 C18orf8Q96DM3 657 aa8.19□□□□□ -1.1
CIITA-201ENST00000324288 IL1RAPL1Q9NZN1 696 aa8.19□□□□□ -1.1
CIITA-201ENST00000324288 DENND5BQ6ZUT9 1274 aa8.19□□□□□ -1.1
CIITA-201ENST00000324288 COL23A1Q86Y22 540 aaPredicted RBP8.19□□□□□ -1.1
CIITA-201ENST00000324288 TRIM48Q8IWZ4 208 aa8.19□□□□□ -1.1
CIITA-201ENST00000324288 UBA3Q8TBC4 463 aa8.19□□□□□ -1.1
CIITA-201ENST00000324288 GPR63Q9BZJ6 419 aa8.19□□□□□ -1.1
CIITA-201ENST00000324288 UNKQ9C0B0 810 aaKnown RBP8.19□□□□□ -1.1
CIITA-201ENST00000324288 COA1Q9GZY4 146 aa8.19□□□□□ -1.1
CIITA-201ENST00000324288 MDC1Q14676 2089 aaKnown RBP8.19□□□□□ -1.1
CIITA-201ENST00000324288 CDHR2Q9BYE9 1310 aa8.19□□□□□ -1.1
CIITA-201ENST00000324288 CBX6O95503 412 aa8.19□□□□□ -1.1
CIITA-201ENST00000324288 ITGAXP20702 1163 aa8.19□□□□□ -1.1
CIITA-201ENST00000324288 ATP6V1B2P21281 511 aa8.19□□□□□ -1.1
CIITA-201ENST00000324288 GALCP54803 685 aa8.19□□□□□ -1.1
CIITA-201ENST00000324288 LSM3P62310 102 aaKnown RBP8.19□□□□□ -1.1
CIITA-201ENST00000324288 ABATP80404 500 aa8.19□□□□□ -1.1
CIITA-201ENST00000324288 DENND6AQ8IWF6 608 aa8.19□□□□□ -1.1
CIITA-201ENST00000324288 TBC1D19Q8N5T2 526 aa8.19□□□□□ -1.1
CIITA-201ENST00000324288 ACAD9Q9H845 621 aa8.19□□□□□ -1.1
CIITA-201ENST00000324288 SH3BP1Q9Y3L3 701 aa8.19□□□□□ -1.1
CIITA-201ENST00000324288 HEATR9A2RTY3 570 aa8.19□□□□□ -1.1
CIITA-201ENST00000324288 EEF2KO00418 725 aaKnown RBP8.19□□□□□ -1.1
CIITA-201ENST00000324288 PTPN7P35236 360 aa8.19□□□□□ -1.1
CIITA-201ENST00000324288 COILP38432 576 aaPredicted RBP8.19□□□□□ -1.1
CIITA-201ENST00000324288 RPL10AP62906 217 aaKnown RBP8.19□□□□□ -1.1
CIITA-201ENST00000324288 KRT76Q01546 638 aa8.19□□□□□ -1.1
CIITA-201ENST00000324288 ITGADQ13349 1161 aa8.19□□□□□ -1.1
CIITA-201ENST00000324288 MADCAM1Q13477 382 aa8.19□□□□□ -1.1
CIITA-201ENST00000324288 ARMC6Q6NXE6 501 aa8.19□□□□□ -1.1
CIITA-201ENST00000324288 EPHX4Q8IUS5 362 aa8.19□□□□□ -1.1
CIITA-201ENST00000324288 STK33Q9BYT3 514 aa8.19□□□□□ -1.1
CIITA-201ENST00000324288 PHGDHO43175 533 aaKnown RBP8.19□□□□□ -1.1
CIITA-201ENST00000324288 MAP3K6O95382 1288 aa8.19□□□□□ -1.1
CIITA-201ENST00000324288 RALBP11234 206 aa8.19□□□□□ -1.1
CIITA-201ENST00000324288 PEX5P50542 639 aa8.19□□□□□ -1.1
CIITA-201ENST00000324288 TRAF2Q12933 501 aa8.19□□□□□ -1.1
CIITA-201ENST00000324288 ATG4AQ8WYN0 398 aa8.19□□□□□ -1.1
CIITA-201ENST00000324288 PMPCBO75439 489 aa8.19□□□□□ -1.1
CIITA-201ENST00000324288 MLNP12872 115 aa8.19□□□□□ -1.1
CIITA-201ENST00000324288 CHI3L1P36222 383 aaPredicted RBP8.19□□□□□ -1.1
CIITA-201ENST00000324288 ITGB3BPQ13352 177 aaPredicted RBP8.19□□□□□ -1.1
CIITA-201ENST00000324288 LRRC8DQ7L1W4 858 aa8.19□□□□□ -1.1
CIITA-201ENST00000324288 POU5F2Q8N7G0 328 aa8.19□□□□□ -1.1
CIITA-201ENST00000324288 MYO7AQ13402 2215 aa8.19□□□□□ -1.1
CIITA-201ENST00000324288 ESPL1Q14674 2120 aa8.19□□□□□ -1.1
CIITA-201ENST00000324288 PALLDQ8WX93 1383 aa8.18□□□□□ -1.1
CIITA-201ENST00000324288 BGNP21810 368 aa8.18□□□□□ -1.1
CIITA-201ENST00000324288 EPHB2P29323 1055 aa8.18□□□□□ -1.1
CIITA-201ENST00000324288 GLRBP48167 497 aa8.18□□□□□ -1.1
CIITA-201ENST00000324288 ZNF579Q8NAF0 562 aaKnown RBP8.18□□□□□ -1.1
CIITA-201ENST00000324288 PDLIM2Q96JY6 352 aa8.18□□□□□ -1.1
CIITA-201ENST00000324288 TBATAQ96M53 351 aa8.18□□□□□ -1.1
CIITA-201ENST00000324288 PLEKHG4BQ96PX9 1271 aa8.18□□□□□ -1.1
CIITA-201ENST00000324288 KCTD14Q9BQ13 255 aaPredicted RBP8.18□□□□□ -1.1
CIITA-201ENST00000324288 VTA1Q9NP79 307 aa8.18□□□□□ -1.1
CIITA-201ENST00000324288 ABCB10Q9NRK6 738 aa8.18□□□□□ -1.1
CIITA-201ENST00000324288 WDR19Q8NEZ3 1342 aa8.18□□□□□ -1.1
CIITA-201ENST00000324288 FAM186AA6NE01 2351 aa8.18□□□□□ -1.1
CIITA-201ENST00000324288 ENDOD1O94919 500 aa8.18□□□□□ -1.1
CIITA-201ENST00000324288 DARSP14868 501 aaKnown RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms