RNA–Protein interactions for RNA: ENST00000320672.8

SSBP2-201, Transcript of single stranded DNA binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP2, Length 8,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-201ENST00000320672 NRBF2Q96F24 287 aa9.18□□□□□ -0.94
SSBP2-201ENST00000320672 SEPHS2Q99611 448 aa9.18□□□□□ -0.94
SSBP2-201ENST00000320672 NT5MQ9NPB1 228 aa9.18□□□□□ -0.94
SSBP2-201ENST00000320672 TDRKHQ9Y2W6 561 aaKnown RBP9.18□□□□□ -0.94
SSBP2-201ENST00000320672 ORC4O43929 436 aa9.18□□□□□ -0.94
SSBP2-201ENST00000320672 SPATA31D3P0C874 917 aa9.18□□□□□ -0.94
SSBP2-201ENST00000320672 RRM1P23921 792 aa9.18□□□□□ -0.94
SSBP2-201ENST00000320672 PON1P27169 355 aa9.18□□□□□ -0.94
SSBP2-201ENST00000320672 SPATA31D4Q6ZUB0 917 aa9.18□□□□□ -0.94
SSBP2-201ENST00000320672 FAM172AQ8WUF8 416 aa9.18□□□□□ -0.94
SSBP2-201ENST00000320672 ZMYM5Q9UJ78 669 aa9.18□□□□□ -0.94
SSBP2-201ENST00000320672 TBC1D12O60347 775 aa9.18□□□□□ -0.94
SSBP2-201ENST00000320672 PTGER2P43116 358 aa9.18□□□□□ -0.94
SSBP2-201ENST00000320672 ZNF560Q96MR9 790 aa9.18□□□□□ -0.94
SSBP2-201ENST00000320672 ACOX2Q99424 681 aa9.18□□□□□ -0.94
SSBP2-201ENST00000320672 IQCA1LA6NCM1 817 aa9.18□□□□□ -0.94
SSBP2-201ENST00000320672 FAM187AA6NFU0 413 aa9.18□□□□□ -0.94
SSBP2-201ENST00000320672 H3BQF6 201 aa9.18□□□□□ -0.94
SSBP2-201ENST00000320672 CYB561D2O14569 222 aa9.18□□□□□ -0.94
SSBP2-201ENST00000320672 PQBP1O60828 265 aaKnown RBP9.18□□□□□ -0.94
SSBP2-201ENST00000320672 IL10P22301 178 aa9.18□□□□□ -0.94
SSBP2-201ENST00000320672 ICE2Q659A1 982 aa9.18□□□□□ -0.94
SSBP2-201ENST00000320672 TPGS1Q6ZTW0 290 aa9.18□□□□□ -0.94
SSBP2-201ENST00000320672 ANO5Q75V66 913 aa9.18□□□□□ -0.94
SSBP2-201ENST00000320672 DDI1Q8WTU0 396 aa9.18□□□□□ -0.94
SSBP2-201ENST00000320672 SLC5A5Q92911 643 aa9.18□□□□□ -0.94
SSBP2-201ENST00000320672 GLIS2Q9BZE0 524 aaPredicted RBP9.18□□□□□ -0.94
SSBP2-201ENST00000320672 SMARCAD1Q9H4L7 1026 aa9.18□□□□□ -0.94
SSBP2-201ENST00000320672 SLC40A1Q9NP59 571 aa9.18□□□□□ -0.94
SSBP2-201ENST00000320672 MAP3K20Q9NYL2 800 aaKnown RBP9.18□□□□□ -0.94
SSBP2-201ENST00000320672 TRIM33Q9UPN9 1127 aa9.18□□□□□ -0.94
SSBP2-201ENST00000320672 ARHGEF37A1IGU5 675 aa9.17□□□□□ -0.94
SSBP2-201ENST00000320672 NR5A2O00482 541 aa9.17□□□□□ -0.94
SSBP2-201ENST00000320672 OTUD4Q01804 1114 aaKnown RBP9.17□□□□□ -0.94
SSBP2-201ENST00000320672 TCHHL1Q5QJ38 904 aaPredicted RBP9.17□□□□□ -0.94
SSBP2-201ENST00000320672 ERAP2Q6P179 960 aa9.17□□□□□ -0.94
SSBP2-201ENST00000320672 ASZ1Q8WWH4 475 aa9.17□□□□□ -0.94
SSBP2-201ENST00000320672 RNF31Q96EP0 1072 aa9.17□□□□□ -0.94
SSBP2-201ENST00000320672 TRIM54Q9BYV2 358 aa9.17□□□□□ -0.94
SSBP2-201ENST00000320672 MAGEB5Q9BZ81 275 aa9.17□□□□□ -0.94
SSBP2-201ENST00000320672 SEMA6AQ9H2E6 1030 aa9.17□□□□□ -0.94
SSBP2-201ENST00000320672 MANSC1Q9H8J5 431 aa9.17□□□□□ -0.94
SSBP2-201ENST00000320672 AGPAT3Q9NRZ7 376 aa9.17□□□□□ -0.94
SSBP2-201ENST00000320672 SHOC2Q9UQ13 582 aa9.17□□□□□ -0.94
SSBP2-201ENST00000320672 DNAJC16Q9Y2G8 782 aa9.17□□□□□ -0.94
SSBP2-201ENST00000320672 WDR47O94967 919 aa9.17□□□□□ -0.94
SSBP2-201ENST00000320672 RPS7P62081 194 aaKnown RBP9.17□□□□□ -0.94
SSBP2-201ENST00000320672 POU6F1Q14863 301 aa9.17□□□□□ -0.94
SSBP2-201ENST00000320672 MAPRE1Q15691 268 aaKnown RBP9.17□□□□□ -0.94
SSBP2-201ENST00000320672 AP5B1Q2VPB7 878 aa9.17□□□□□ -0.94
SSBP2-201ENST00000320672 MILR1Q7Z6M3 343 aa9.17□□□□□ -0.94
SSBP2-201ENST00000320672 KAT5Q92993 513 aa9.17□□□□□ -0.94
SSBP2-201ENST00000320672 SNX8Q9Y5X2 465 aa9.17□□□□□ -0.94
SSBP2-201ENST00000320672 ANO9A1A5B4 782 aa9.17□□□□□ -0.94
SSBP2-201ENST00000320672 ZNF197O14709 1029 aa9.17□□□□□ -0.94
SSBP2-201ENST00000320672 FLT3P36888 993 aa9.17□□□□□ -0.94
SSBP2-201ENST00000320672 CDH18Q13634 790 aa9.17□□□□□ -0.94
SSBP2-201ENST00000320672 C9orf131Q5VYM1 1079 aa9.17□□□□□ -0.94
SSBP2-201ENST00000320672 CAPRIN2Q6IMN6 1127 aaKnown RBP9.17□□□□□ -0.94
SSBP2-201ENST00000320672 GFM2Q969S9 779 aaKnown RBP9.17□□□□□ -0.94
SSBP2-201ENST00000320672 E2F7Q96AV8 911 aa9.17□□□□□ -0.94
SSBP2-201ENST00000320672 FEM1CQ96JP0 617 aa9.17□□□□□ -0.94
SSBP2-201ENST00000320672 BBS2Q9BXC9 721 aa9.17□□□□□ -0.94
SSBP2-201ENST00000320672 PALMDQ9NP74 551 aa9.17□□□□□ -0.94
SSBP2-201ENST00000320672 ZC4H2Q9NQZ6 224 aa9.17□□□□□ -0.94
SSBP2-201ENST00000320672 WWOXQ9NZC7 414 aa9.17□□□□□ -0.94
SSBP2-201ENST00000320672 CHUKO15111 745 aa9.17□□□□□ -0.94
SSBP2-201ENST00000320672 FAM153BP0C7A2 387 aa9.17□□□□□ -0.94
SSBP2-201ENST00000320672 GHRP10912 638 aa9.17□□□□□ -0.94
SSBP2-201ENST00000320672 FAM153CQ494X1 144 aa9.17□□□□□ -0.94
SSBP2-201ENST00000320672 SRLQ86TD4 932 aa9.17□□□□□ -0.94
SSBP2-201ENST00000320672 BPIFA1Q9NP55 256 aa9.17□□□□□ -0.94
SSBP2-201ENST00000320672 ARMCX1Q9P291 453 aa9.17□□□□□ -0.94
SSBP2-201ENST00000320672 FAM153AQ9UHL3 310 aa9.17□□□□□ -0.94
SSBP2-201ENST00000320672 DNAJC8O75937 253 aaPredicted RBP9.17□□□□□ -0.94
SSBP2-201ENST00000320672 AMPD1P23109 780 aa9.17□□□□□ -0.94
SSBP2-201ENST00000320672 C16orf86Q6ZW13 317 aa9.17□□□□□ -0.94
SSBP2-201ENST00000320672 C2orf73Q8N5S3 287 aaPredicted RBP9.17□□□□□ -0.94
SSBP2-201ENST00000320672 GPBP1L1Q9HC44 474 aaPredicted RBP9.17□□□□□ -0.94
SSBP2-201ENST00000320672 TUFT1Q9NNX1 390 aa9.17□□□□□ -0.94
SSBP2-201ENST00000320672 GPRC5DQ9NZD1 345 aa9.17□□□□□ -0.94
SSBP2-201ENST00000320672 CDV3Q9UKY7 258 aaKnown RBP9.17□□□□□ -0.94
SSBP2-201ENST00000320672 PHTF1Q9UMS5 762 aa9.17□□□□□ -0.94
SSBP2-201ENST00000320672 RAP1GDS1P52306 607 aa9.17□□□□□ -0.94
SSBP2-201ENST00000320672 COL9A3Q14050 684 aaPredicted RBP9.17□□□□□ -0.94
SSBP2-201ENST00000320672 NAB2Q15742 525 aa9.17□□□□□ -0.94
SSBP2-201ENST00000320672 CLEC16AQ2KHT3 1053 aa9.17□□□□□ -0.94
SSBP2-201ENST00000320672 NLRP9Q7RTR0 991 aa9.17□□□□□ -0.94
SSBP2-201ENST00000320672 HORMAD1Q86X24 394 aa9.17□□□□□ -0.94
SSBP2-201ENST00000320672 PLD3Q8IV08 490 aa9.17□□□□□ -0.94
SSBP2-201ENST00000320672 SPACA7Q96KW9 195 aa9.17□□□□□ -0.94
SSBP2-201ENST00000320672 SPON1Q9HCB6 807 aa9.17□□□□□ -0.94
SSBP2-201ENST00000320672 SYTL2Q9HCH5 934 aa9.17□□□□□ -0.94
SSBP2-201ENST00000320672 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.17□□□□□ -0.94
SSBP2-201ENST00000320672 RHOBTB3O94955 611 aa9.17□□□□□ -0.94
SSBP2-201ENST00000320672 HSMCR30P0CW71 290 aa9.17□□□□□ -0.94
SSBP2-201ENST00000320672 SCNN1BP51168 640 aa9.17□□□□□ -0.94
SSBP2-201ENST00000320672 LLGL2Q6P1M3 1020 aa9.17□□□□□ -0.94
SSBP2-201ENST00000320672 SGMS1Q86VZ5 419 aa9.17□□□□□ -0.94
SSBP2-201ENST00000320672 RDM1Q8NG50 284 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms