RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 PXMP2Q9NR77 195 aa14.09□□□□□ -0.15
SKA3-202ENST00000314759 C2orf71A6NGG8 1288 aa14.09□□□□□ -0.15
SKA3-202ENST00000314759 DNAJC6O75061 913 aa14.09□□□□□ -0.15
SKA3-202ENST00000314759 DGAT1O75907 488 aa14.09□□□□□ -0.15
SKA3-202ENST00000314759 DLDP09622 509 aaKnown RBP14.09□□□□□ -0.15
SKA3-202ENST00000314759 RTP1P59025 263 aa14.09□□□□□ -0.15
SKA3-202ENST00000314759 OTUD4Q01804 1114 aaKnown RBP14.09□□□□□ -0.15
SKA3-202ENST00000314759 DGKZQ13574 1117 aa14.09□□□□□ -0.15
SKA3-202ENST00000314759 KLHL38Q2WGJ6 581 aa14.09□□□□□ -0.15
SKA3-202ENST00000314759 SWSAP1Q6NVH7 229 aa14.09□□□□□ -0.15
SKA3-202ENST00000314759 PPP1R2P3Q6NXS1 205 aa14.09□□□□□ -0.15
SKA3-202ENST00000314759 LRRC74BQ6ZQY2 392 aa14.09□□□□□ -0.15
SKA3-202ENST00000314759 APLFQ8IW19 511 aaPredicted RBP14.09□□□□□ -0.15
SKA3-202ENST00000314759 MCPH1Q8NEM0 835 aa14.09□□□□□ -0.15
SKA3-202ENST00000314759 ALKBH8Q96BT7 664 aaKnown RBP14.09□□□□□ -0.15
SKA3-202ENST00000314759 GORASP1Q9BQQ3 440 aa14.09□□□□□ -0.15
SKA3-202ENST00000314759 TUBB6Q9BUF5 446 aa14.09□□□□□ -0.15
SKA3-202ENST00000314759 TMEM120AQ9BXJ8 343 aa14.09□□□□□ -0.15
SKA3-202ENST00000314759 TAS2R1Q9NYW7 299 aa14.09□□□□□ -0.15
SKA3-202ENST00000314759 RBAKQ9NYW8 714 aaPredicted RBP14.09□□□□□ -0.15
SKA3-202ENST00000314759 STYXL1Q9Y6J8 313 aa14.09□□□□□ -0.15
SKA3-202ENST00000314759 RGPD3A6NKT7 1758 aaPredicted RBP14.09□□□□□ -0.15
SKA3-202ENST00000314759 RGPD4Q7Z3J3 1758 aa14.09□□□□□ -0.15
SKA3-202ENST00000314759 E7ESA3 106 aa14.08□□□□□ -0.15
SKA3-202ENST00000314759 NDC80O14777 642 aa14.08□□□□□ -0.15
SKA3-202ENST00000314759 UBTFL6P0CB48 400 aaPredicted RBP14.08□□□□□ -0.15
SKA3-202ENST00000314759 TBXAS1P24557 533 aaPredicted RBP14.08□□□□□ -0.15
SKA3-202ENST00000314759 RPL22P35268 128 aaKnown RBP14.08□□□□□ -0.15
SKA3-202ENST00000314759 ZNF132P52740 706 aa14.08□□□□□ -0.15
SKA3-202ENST00000314759 CDK16Q00536 496 aa14.08□□□□□ -0.15
SKA3-202ENST00000314759 OCRLQ01968 901 aa14.08□□□□□ -0.15
SKA3-202ENST00000314759 PALM2Q8IXS6 379 aa14.08□□□□□ -0.15
SKA3-202ENST00000314759 SLC38A10Q9HBR0 1119 aa14.08□□□□□ -0.15
SKA3-202ENST00000314759 WASF2Q9Y6W5 498 aa14.08□□□□□ -0.15
SKA3-202ENST00000314759 TMEM63AO94886 807 aa14.08□□□□□ -0.16
SKA3-202ENST00000314759 CALB1P05937 261 aa14.08□□□□□ -0.16
SKA3-202ENST00000314759 DHRS4L1P0CG22 281 aa14.08□□□□□ -0.16
SKA3-202ENST00000314759 SKIP12755 728 aa14.08□□□□□ -0.16
SKA3-202ENST00000314759 ETV4P43268 484 aa14.08□□□□□ -0.16
SKA3-202ENST00000314759 ZBTB16Q05516 673 aa14.08□□□□□ -0.16
SKA3-202ENST00000314759 SLC34A1Q06495 639 aa14.08□□□□□ -0.16
SKA3-202ENST00000314759 TBC1D25Q3MII6 688 aa14.08□□□□□ -0.16
SKA3-202ENST00000314759 ARHGEF16Q5VV41 709 aa14.08□□□□□ -0.16
SKA3-202ENST00000314759 TTC7BQ86TV6 843 aa14.08□□□□□ -0.16
SKA3-202ENST00000314759 SCYL3Q8IZE3 742 aa14.08□□□□□ -0.16
SKA3-202ENST00000314759 RDM1Q8NG50 284 aa14.08□□□□□ -0.16
SKA3-202ENST00000314759 CFAP61Q8NHU2 1237 aa14.08□□□□□ -0.16
SKA3-202ENST00000314759 GATA6Q92908 595 aa14.08□□□□□ -0.16
SKA3-202ENST00000314759 CYP26B1Q9NR63 512 aa14.08□□□□□ -0.16
SKA3-202ENST00000314759 DDX56Q9NY93 547 aaKnown RBP14.08□□□□□ -0.16
SKA3-202ENST00000314759 SEPT9Q9UHD8 586 aaPredicted RBP14.08□□□□□ -0.16
SKA3-202ENST00000314759 MTO1Q9Y2Z2 717 aaKnown RBP14.08□□□□□ -0.16
SKA3-202ENST00000314759 LPXNO60711 386 aa14.08□□□□□ -0.16
SKA3-202ENST00000314759 PSMG1O95456 288 aa14.08□□□□□ -0.16
SKA3-202ENST00000314759 PYGLP06737 847 aa14.08□□□□□ -0.16
SKA3-202ENST00000314759 SP4Q02446 784 aa14.08□□□□□ -0.16
SKA3-202ENST00000314759 PIGHQ14442 188 aaPredicted RBP14.08□□□□□ -0.16
SKA3-202ENST00000314759 PRKD1Q15139 912 aaPredicted RBP14.08□□□□□ -0.16
SKA3-202ENST00000314759 SMTNL2Q2TAL5 461 aa14.08□□□□□ -0.16
SKA3-202ENST00000314759 BBS9Q3SYG4 887 aa14.08□□□□□ -0.16
SKA3-202ENST00000314759 SPDYE2Q495Y8 402 aa14.08□□□□□ -0.16
SKA3-202ENST00000314759 VPS52Q8N1B4 723 aa14.08□□□□□ -0.16
SKA3-202ENST00000314759 EZH1Q92800 747 aaPredicted RBP14.08□□□□□ -0.16
SKA3-202ENST00000314759 ATP6V0A1Q93050 837 aa14.08□□□□□ -0.16
SKA3-202ENST00000314759 MCUR1Q96AQ8 359 aa14.08□□□□□ -0.16
SKA3-202ENST00000314759 SERAC1Q96JX3 654 aa14.08□□□□□ -0.16
SKA3-202ENST00000314759 PHACTR1Q9C0D0 580 aa14.08□□□□□ -0.16
SKA3-202ENST00000314759 KRT82Q9NSB4 513 aa14.08□□□□□ -0.16
SKA3-202ENST00000314759 TBC1D12O60347 775 aa14.07□□□□□ -0.16
SKA3-202ENST00000314759 CST8O60676 142 aa14.07□□□□□ -0.16
SKA3-202ENST00000314759 TGDSO95455 350 aa14.07□□□□□ -0.16
SKA3-202ENST00000314759 MT-ND3P03897 115 aa14.07□□□□□ -0.16
SKA3-202ENST00000314759 SERPINB4P48594 390 aa14.07□□□□□ -0.16
SKA3-202ENST00000314759 NEK3P51956 506 aa14.07□□□□□ -0.16
SKA3-202ENST00000314759 KCNT1Q5JUK3 1230 aa14.07□□□□□ -0.16
SKA3-202ENST00000314759 CIAPIN1Q6FI81 312 aa14.07□□□□□ -0.16
SKA3-202ENST00000314759 IGDCC3Q8IVU1 814 aa14.07□□□□□ -0.16
SKA3-202ENST00000314759 FAM111AQ96PZ2 611 aa14.07□□□□□ -0.16
SKA3-202ENST00000314759 GINM1Q9NU53 330 aa14.07□□□□□ -0.16
SKA3-202ENST00000314759 MAP3K20Q9NYL2 800 aaKnown RBP14.07□□□□□ -0.16
SKA3-202ENST00000314759 AGTPBP1Q9UPW5 1226 aa14.07□□□□□ -0.16
SKA3-202ENST00000314759 ZCCHC18P0CG32 403 aa14.07□□□□□ -0.16
SKA3-202ENST00000314759 BGNP21810 368 aa14.07□□□□□ -0.16
SKA3-202ENST00000314759 NCOA4Q13772 614 aa14.07□□□□□ -0.16
SKA3-202ENST00000314759 SEZ6Q53EL9 994 aa14.07□□□□□ -0.16
SKA3-202ENST00000314759 ZNF394Q53GI3 561 aa14.07□□□□□ -0.16
SKA3-202ENST00000314759 CYP4A22Q5TCH4 519 aa14.07□□□□□ -0.16
SKA3-202ENST00000314759 SH2D5Q6ZV89 423 aa14.07□□□□□ -0.16
SKA3-202ENST00000314759 WDTC1Q8N5D0 677 aa14.07□□□□□ -0.16
SKA3-202ENST00000314759 DRAXINQ8NBI3 349 aaPredicted RBP14.07□□□□□ -0.16
SKA3-202ENST00000314759 SYNCQ9H7C4 482 aa14.07□□□□□ -0.16
SKA3-202ENST00000314759 ZWILCHQ9H900 591 aa14.07□□□□□ -0.16
SKA3-202ENST00000314759 CST3P01034 146 aaPredicted RBP14.06□□□□□ -0.16
SKA3-202ENST00000314759 ASNSP08243 561 aa14.06□□□□□ -0.16
SKA3-202ENST00000314759 ESRRAP11474 423 aaPredicted RBP14.06□□□□□ -0.16
SKA3-202ENST00000314759 IL1R2P27930 398 aa14.06□□□□□ -0.16
SKA3-202ENST00000314759 KRT72Q14CN4 511 aa14.06□□□□□ -0.16
SKA3-202ENST00000314759 DLGAP5Q15398 846 aa14.06□□□□□ -0.16
SKA3-202ENST00000314759 PDCD2Q16342 344 aaPredicted RBP14.06□□□□□ -0.16
SKA3-202ENST00000314759 CHSY1Q86X52 802 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms