RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 PHF21AQ96BD5 680 aa8.52□□□□□ -1.04
VPS41-202ENST00000310301 VPS50Q96JG6 964 aa8.52□□□□□ -1.04
VPS41-202ENST00000310301 EGFL8Q99944 293 aa8.52□□□□□ -1.04
VPS41-202ENST00000310301 ROPN1BQ9BZX4 212 aaPredicted RBP8.52□□□□□ -1.04
VPS41-202ENST00000310301 ROPN1Q9HAT0 212 aaPredicted RBP8.52□□□□□ -1.04
VPS41-202ENST00000310301 ENTPD7Q9NQZ7 604 aa8.52□□□□□ -1.04
VPS41-202ENST00000310301 ETAA1Q9NY74 926 aa8.52□□□□□ -1.04
VPS41-202ENST00000310301 MAD2L2Q9UI95 211 aa8.52□□□□□ -1.04
VPS41-202ENST00000310301 A0A1B0GTH6 734 aa8.52□□□□□ -1.05
VPS41-202ENST00000310301 FAM95CA0A1B0GW59 222 aa8.52□□□□□ -1.05
VPS41-202ENST00000310301 HNRNPRO43390 633 aaKnown RBP8.52□□□□□ -1.05
VPS41-202ENST00000310301 OCM2P0CE71 109 aa8.52□□□□□ -1.05
VPS41-202ENST00000310301 OCMP0CE72 109 aaPredicted RBP8.52□□□□□ -1.05
VPS41-202ENST00000310301 CPB1P15086 417 aa8.52□□□□□ -1.05
VPS41-202ENST00000310301 AMPD2Q01433 879 aa8.52□□□□□ -1.05
VPS41-202ENST00000310301 ADRM1Q16186 407 aa8.52□□□□□ -1.05
VPS41-202ENST00000310301 IYDQ6PHW0 289 aa8.52□□□□□ -1.05
VPS41-202ENST00000310301 ZNF513Q8N8E2 541 aaPredicted RBP8.52□□□□□ -1.05
VPS41-202ENST00000310301 MPP4Q96JB8 637 aa8.52□□□□□ -1.05
VPS41-202ENST00000310301 TUFT1Q9NNX1 390 aa8.52□□□□□ -1.05
VPS41-202ENST00000310301 PCMTD2Q9NV79 361 aa8.52□□□□□ -1.05
VPS41-202ENST00000310301 FAM153AQ9UHL3 310 aa8.52□□□□□ -1.05
VPS41-202ENST00000310301 EMSYQ7Z589 1322 aa8.52□□□□□ -1.05
VPS41-202ENST00000310301 F8W8V4 182 aa8.52□□□□□ -1.05
VPS41-202ENST00000310301 ATP9AO75110 1047 aa8.52□□□□□ -1.05
VPS41-202ENST00000310301 BTG3Q14201 252 aaPredicted RBP8.52□□□□□ -1.05
VPS41-202ENST00000310301 KNOP1Q1ED39 458 aaKnown RBP8.52□□□□□ -1.05
VPS41-202ENST00000310301 ARHGAP15Q53QZ3 475 aa8.52□□□□□ -1.05
VPS41-202ENST00000310301 OR6B3Q8NGW1 331 aa8.52□□□□□ -1.05
VPS41-202ENST00000310301 MAGEB5Q9BZ81 275 aa8.52□□□□□ -1.05
VPS41-202ENST00000310301 JMJD4Q9H9V9 463 aa8.52□□□□□ -1.05
VPS41-202ENST00000310301 PRMT7Q9NVM4 692 aaPredicted RBP8.52□□□□□ -1.05
VPS41-202ENST00000310301 CDYLQ9Y232 598 aa8.52□□□□□ -1.05
VPS41-202ENST00000310301 LOC100653049A0A140TA62 436 aa8.52□□□□□ -1.05
VPS41-202ENST00000310301 LINC00854A0A1B0GVQ3 168 aa8.52□□□□□ -1.05
VPS41-202ENST00000310301 MOXD2PA6NHM9 499 aa8.52□□□□□ -1.05
VPS41-202ENST00000310301 KRT34O76011 436 aa8.52□□□□□ -1.05
VPS41-202ENST00000310301 WASHC5Q12768 1159 aa8.52□□□□□ -1.05
VPS41-202ENST00000310301 TRADDQ15628 312 aa8.52□□□□□ -1.05
VPS41-202ENST00000310301 ZNF667Q5HYK9 610 aa8.52□□□□□ -1.05
VPS41-202ENST00000310301 ARMCX6Q7L4S7 300 aa8.52□□□□□ -1.05
VPS41-202ENST00000310301 CCDC60Q8IWA6 550 aaPredicted RBP8.52□□□□□ -1.05
VPS41-202ENST00000310301 SLC35G2Q8TBE7 412 aa8.52□□□□□ -1.05
VPS41-202ENST00000310301 KAZALD1Q96I82 304 aa8.52□□□□□ -1.05
VPS41-202ENST00000310301 CNDP1Q96KN2 507 aa8.52□□□□□ -1.05
VPS41-202ENST00000310301 PNKPQ96T60 521 aa8.52□□□□□ -1.05
VPS41-202ENST00000310301 FUT8Q9BYC5 575 aa8.52□□□□□ -1.05
VPS41-202ENST00000310301 ISCUQ9H1K1 167 aa8.52□□□□□ -1.05
VPS41-202ENST00000310301 TRIM45Q9H8W5 580 aaPredicted RBP8.52□□□□□ -1.05
VPS41-202ENST00000310301 DDX4Q9NQI0 724 aaKnown RBP8.52□□□□□ -1.05
VPS41-202ENST00000310301 BFARQ9NZS9 450 aa8.52□□□□□ -1.05
VPS41-202ENST00000310301 RWDD3Q9Y3V2 267 aa8.52□□□□□ -1.05
VPS41-202ENST00000310301 USP1O94782 785 aa8.52□□□□□ -1.05
VPS41-202ENST00000310301 ALBP02768 609 aa8.52□□□□□ -1.05
VPS41-202ENST00000310301 GSNP06396 782 aa8.52□□□□□ -1.05
VPS41-202ENST00000310301 GNA15P30679 374 aa8.52□□□□□ -1.05
VPS41-202ENST00000310301 TCF7P36402 384 aaPredicted RBP8.52□□□□□ -1.05
VPS41-202ENST00000310301 PSEN2P49810 448 aa8.52□□□□□ -1.05
VPS41-202ENST00000310301 ST13P50502 369 aaKnown RBP8.52□□□□□ -1.05
VPS41-202ENST00000310301 VAMP7P51809 220 aa8.52□□□□□ -1.05
VPS41-202ENST00000310301 BCAR1P56945 870 aa8.52□□□□□ -1.05
VPS41-202ENST00000310301 NUP107P57740 925 aa8.52□□□□□ -1.05
VPS41-202ENST00000310301 KRR1Q13601 381 aaKnown RBP8.52□□□□□ -1.05
VPS41-202ENST00000310301 ATP1A4Q13733 1029 aa8.52□□□□□ -1.05
VPS41-202ENST00000310301 RAD9BQ6WBX8 426 aa8.52□□□□□ -1.05
VPS41-202ENST00000310301 C3orf20Q8ND61 904 aa8.52□□□□□ -1.05
VPS41-202ENST00000310301 CPVLQ9H3G5 476 aa8.52□□□□□ -1.05
VPS41-202ENST00000310301 KLHL11Q9NVR0 708 aa8.52□□□□□ -1.05
VPS41-202ENST00000310301 TMEM161AQ9NX61 479 aa8.52□□□□□ -1.05
VPS41-202ENST00000310301 HSPBP1Q9NZL4 362 aa8.52□□□□□ -1.05
VPS41-202ENST00000310301 DDX20Q9UHI6 824 aaKnown RBP8.52□□□□□ -1.05
VPS41-202ENST00000310301 NEU2Q9Y3R4 380 aa8.52□□□□□ -1.05
VPS41-202ENST00000310301 ZNF189O75820 626 aaPredicted RBP8.51□□□□□ -1.05
VPS41-202ENST00000310301 URODP06132 367 aa8.51□□□□□ -1.05
VPS41-202ENST00000310301 PSMC3P17980 439 aa8.51□□□□□ -1.05
VPS41-202ENST00000310301 SSTR3P32745 418 aaPredicted RBP8.51□□□□□ -1.05
VPS41-202ENST00000310301 CACNA2D1P54289 1103 aa8.51□□□□□ -1.05
VPS41-202ENST00000310301 EIF3EP60228 445 aaKnown RBP8.51□□□□□ -1.05
VPS41-202ENST00000310301 PTK7Q13308 1070 aa8.51□□□□□ -1.05
VPS41-202ENST00000310301 PDAP1Q13442 181 aaKnown RBP8.51□□□□□ -1.05
VPS41-202ENST00000310301 CYB5R4Q7L1T6 521 aa8.51□□□□□ -1.05
VPS41-202ENST00000310301 XXYLT1Q8NBI6 393 aa8.51□□□□□ -1.05
VPS41-202ENST00000310301 AFG1LQ8WV93 481 aa8.51□□□□□ -1.05
VPS41-202ENST00000310301 FAM162AQ96A26 154 aa8.51□□□□□ -1.05
VPS41-202ENST00000310301 AGPAT1Q99943 283 aa8.51□□□□□ -1.05
VPS41-202ENST00000310301 POLR3FQ9H1D9 316 aaPredicted RBP8.51□□□□□ -1.05
VPS41-202ENST00000310301 KDM4CQ9H3R0 1056 aa8.51□□□□□ -1.05
VPS41-202ENST00000310301 ZNF556Q9HAH1 456 aa8.51□□□□□ -1.05
VPS41-202ENST00000310301 H3BRB1 525 aa8.51□□□□□ -1.05
VPS41-202ENST00000310301 H7C4K7 107 aa8.51□□□□□ -1.05
VPS41-202ENST00000310301 BNIP3LO60238 219 aa8.51□□□□□ -1.05
VPS41-202ENST00000310301 CLPTM1O96005 669 aa8.51□□□□□ -1.05
VPS41-202ENST00000310301 HSD17B3P37058 310 aa8.51□□□□□ -1.05
VPS41-202ENST00000310301 ALDH5A1P51649 535 aaPredicted RBP8.51□□□□□ -1.05
VPS41-202ENST00000310301 ZNF200P98182 395 aaPredicted RBP8.51□□□□□ -1.05
VPS41-202ENST00000310301 MFSD10Q14728 455 aa8.51□□□□□ -1.05
VPS41-202ENST00000310301 NOTUMQ6P988 496 aa8.51□□□□□ -1.05
VPS41-202ENST00000310301 MMGT1Q8N4V1 131 aa8.51□□□□□ -1.05
VPS41-202ENST00000310301 PCYOX1LQ8NBM8 494 aa8.51□□□□□ -1.05
VPS41-202ENST00000310301 GLMNQ92990 594 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms