RNA–Protein interactions for RNA: ENST00000309784.8

TRIM59-201, Transcript of tripartite motif containing 59, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM59, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-201ENST00000309784 HSPH1Q92598 858 aa11.72□□□□□ -0.53
TRIM59-201ENST00000309784 SEZ6LQ9BYH1 1024 aa11.72□□□□□ -0.53
TRIM59-201ENST00000309784 TMEM161AQ9NX61 479 aa11.72□□□□□ -0.53
TRIM59-201ENST00000309784 ENPP3O14638 875 aa11.72□□□□□ -0.53
TRIM59-201ENST00000309784 ZRANB2O95218 330 aaKnown RBP eCLIP11.72□□□□□ -0.53
TRIM59-201ENST00000309784 TUBB4BP68371 445 aa11.72□□□□□ -0.53
TRIM59-201ENST00000309784 IKBKEQ14164 716 aa11.72□□□□□ -0.53
TRIM59-201ENST00000309784 UPP1Q16831 310 aa11.72□□□□□ -0.53
TRIM59-201ENST00000309784 XKR4Q5GH76 650 aa11.72□□□□□ -0.53
TRIM59-201ENST00000309784 PLEKHA7Q6IQ23 1121 aa11.72□□□□□ -0.53
TRIM59-201ENST00000309784 SLC43A3Q8NBI5 491 aa11.72□□□□□ -0.53
TRIM59-201ENST00000309784 HES6Q96HZ4 224 aa11.72□□□□□ -0.53
TRIM59-201ENST00000309784 CCDC114Q96M63 670 aa11.72□□□□□ -0.53
TRIM59-201ENST00000309784 LRRC1Q9BTT6 524 aa11.72□□□□□ -0.53
TRIM59-201ENST00000309784 DNAJB4Q9UDY4 337 aa11.72□□□□□ -0.53
TRIM59-201ENST00000309784 SDC4P31431 198 aa11.71□□□□□ -0.53
TRIM59-201ENST00000309784 CDK7P50613 346 aa11.71□□□□□ -0.53
TRIM59-201ENST00000309784 TAP1Q03518 808 aa11.71□□□□□ -0.53
TRIM59-201ENST00000309784 SNX1Q13596 522 aa11.71□□□□□ -0.53
TRIM59-201ENST00000309784 KCNT1Q5JUK3 1230 aa11.71□□□□□ -0.53
TRIM59-201ENST00000309784 KIAA1841Q6NSI8 718 aa11.71□□□□□ -0.53
TRIM59-201ENST00000309784 FAM183BPQ6ZVS7 135 aa11.71□□□□□ -0.53
TRIM59-201ENST00000309784 NECAB2Q7Z6G3 386 aa11.71□□□□□ -0.53
TRIM59-201ENST00000309784 CCDC105Q8IYK2 499 aa11.71□□□□□ -0.53
TRIM59-201ENST00000309784 TMEM86AQ8N2M4 240 aa11.71□□□□□ -0.53
TRIM59-201ENST00000309784 CARD9Q9H257 536 aa11.71□□□□□ -0.53
TRIM59-201ENST00000309784 C11orf49Q9H6J7 331 aa11.71□□□□□ -0.53
TRIM59-201ENST00000309784 FAN1Q9Y2M0 1017 aa11.71□□□□□ -0.53
TRIM59-201ENST00000309784 MYBPHLA2RUH7 354 aa11.71□□□□□ -0.53
TRIM59-201ENST00000309784 PITPNM1O00562 1244 aa11.71□□□□□ -0.53
TRIM59-201ENST00000309784 ALDH2P05091 517 aa11.71□□□□□ -0.53
TRIM59-201ENST00000309784 ITGB1P05556 798 aa11.71□□□□□ -0.53
TRIM59-201ENST00000309784 DYNLT1P63172 113 aa11.71□□□□□ -0.53
TRIM59-201ENST00000309784 FBXO38Q6PIJ6 1188 aa11.71□□□□□ -0.53
TRIM59-201ENST00000309784 DCLRE1AQ6PJP8 1040 aa11.71□□□□□ -0.53
TRIM59-201ENST00000309784 SLFN11Q7Z7L1 901 aa11.71□□□□□ -0.53
TRIM59-201ENST00000309784 MAGOHBQ96A72 148 aaKnown RBP11.71□□□□□ -0.53
TRIM59-201ENST00000309784 CALN1Q9BXU9 219 aa11.71□□□□□ -0.53
TRIM59-201ENST00000309784 ABI2Q9NYB9 513 aaPredicted RBP11.71□□□□□ -0.53
TRIM59-201ENST00000309784 PYGMP11217 842 aa11.71□□□□□ -0.54
TRIM59-201ENST00000309784 CPB1P15086 417 aa11.71□□□□□ -0.54
TRIM59-201ENST00000309784 CTCFP49711 727 aaPredicted RBP11.71□□□□□ -0.54
TRIM59-201ENST00000309784 PIGHQ14442 188 aaPredicted RBP11.71□□□□□ -0.54
TRIM59-201ENST00000309784 CLLU1OSQ5K130 101 aa11.71□□□□□ -0.54
TRIM59-201ENST00000309784 FAM171A1Q5VUB5 890 aa11.71□□□□□ -0.54
TRIM59-201ENST00000309784 ANKRD52Q8NB46 1076 aa11.71□□□□□ -0.54
TRIM59-201ENST00000309784 ZNF333Q96JL9 665 aa11.71□□□□□ -0.54
TRIM59-201ENST00000309784 ARFGAP3Q9NP61 516 aa11.71□□□□□ -0.54
TRIM59-201ENST00000309784 ATP8B3O60423 1300 aa11.71□□□□□ -0.54
TRIM59-201ENST00000309784 DDHD2O94830 711 aa11.7□□□□□ -0.54
TRIM59-201ENST00000309784 CLTBP09497 229 aa11.7□□□□□ -0.54
TRIM59-201ENST00000309784 GUCY2DQ02846 1103 aa11.7□□□□□ -0.54
TRIM59-201ENST00000309784 ADIGQ0VDE8 80 aa11.7□□□□□ -0.54
TRIM59-201ENST00000309784 FAAP100Q0VG06 881 aa11.7□□□□□ -0.54
TRIM59-201ENST00000309784 ZNF268Q14587 947 aaPredicted RBP11.7□□□□□ -0.54
TRIM59-201ENST00000309784 ATP13A4Q4VNC1 1196 aa11.7□□□□□ -0.54
TRIM59-201ENST00000309784 PIGZQ86VD9 579 aa11.7□□□□□ -0.54
TRIM59-201ENST00000309784 XYLT1Q86Y38 959 aa11.7□□□□□ -0.54
TRIM59-201ENST00000309784 SPATA2LQ8IUW3 424 aaPredicted RBP11.7□□□□□ -0.54
TRIM59-201ENST00000309784 CCDC26Q8TAB7 109 aa11.7□□□□□ -0.54
TRIM59-201ENST00000309784 HAUS1Q96CS2 278 aa11.7□□□□□ -0.54
TRIM59-201ENST00000309784 UROC1Q96N76 676 aa11.7□□□□□ -0.54
TRIM59-201ENST00000309784 PGLYRP2Q96PD5 576 aa11.7□□□□□ -0.54
TRIM59-201ENST00000309784 ASNSD1Q9NWL6 643 aa11.7□□□□□ -0.54
TRIM59-201ENST00000309784 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.7□□□□□ -0.54
TRIM59-201ENST00000309784 ESYT3A0FGR9 886 aa11.7□□□□□ -0.54
TRIM59-201ENST00000309784 C2CD2LO14523 706 aa11.7□□□□□ -0.54
TRIM59-201ENST00000309784 PRPSAP2O60256 369 aa11.7□□□□□ -0.54
TRIM59-201ENST00000309784 HEXIM1O94992 359 aaKnown RBP11.7□□□□□ -0.54
TRIM59-201ENST00000309784 OR4Q2P0C623 313 aa11.7□□□□□ -0.54
TRIM59-201ENST00000309784 HSPA8P11142 646 aaKnown RBP11.7□□□□□ -0.54
TRIM59-201ENST00000309784 WARSP23381 471 aaKnown RBP11.7□□□□□ -0.54
TRIM59-201ENST00000309784 BDNFP23560 247 aa11.7□□□□□ -0.54
TRIM59-201ENST00000309784 ALDH7A1P49419 539 aaKnown RBP11.7□□□□□ -0.54
TRIM59-201ENST00000309784 RXFP2Q8WXD0 754 aa11.7□□□□□ -0.54
TRIM59-201ENST00000309784 LINC01599Q8WXQ3 324 aa11.7□□□□□ -0.54
TRIM59-201ENST00000309784 FAM118BQ9BPY3 351 aa11.7□□□□□ -0.54
TRIM59-201ENST00000309784 PDE4DIPQ5VU43 2346 aa11.7□□□□□ -0.54
TRIM59-201ENST00000309784 ANK1P16157 1881 aa11.7□□□□□ -0.54
TRIM59-201ENST00000309784 TMEM191CA6NGB0 347 aa11.7□□□□□ -0.54
TRIM59-201ENST00000309784 HOXA2O43364 376 aa11.7□□□□□ -0.54
TRIM59-201ENST00000309784 ACRP10323 421 aa11.7□□□□□ -0.54
TRIM59-201ENST00000309784 GPD1P21695 349 aa11.7□□□□□ -0.54
TRIM59-201ENST00000309784 GRIK1P39086 918 aa11.7□□□□□ -0.54
TRIM59-201ENST00000309784 TAF5Q15542 800 aa11.7□□□□□ -0.54
TRIM59-201ENST00000309784 RSRC2Q7L4I2 434 aaKnown RBP11.7□□□□□ -0.54
TRIM59-201ENST00000309784 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.7□□□□□ -0.54
TRIM59-201ENST00000309784 RSPH1Q8WYR4 309 aa11.7□□□□□ -0.54
TRIM59-201ENST00000309784 NDRG1Q92597 394 aaKnown RBP11.7□□□□□ -0.54
TRIM59-201ENST00000309784 APBB2Q92870 758 aa11.7□□□□□ -0.54
TRIM59-201ENST00000309784 B3GALT6Q96L58 329 aa11.7□□□□□ -0.54
TRIM59-201ENST00000309784 COLEC11Q9BWP8 271 aa11.7□□□□□ -0.54
TRIM59-201ENST00000309784 HCSTQ9UBK5 93 aa11.7□□□□□ -0.54
TRIM59-201ENST00000309784 AMACRQ9UHK6 382 aa11.7□□□□□ -0.54
TRIM59-201ENST00000309784 DDX3YO15523 660 aaKnown RBP11.69□□□□□ -0.54
TRIM59-201ENST00000309784 SEC31AO94979 1220 aaKnown RBP11.69□□□□□ -0.54
TRIM59-201ENST00000309784 SETSIPP0DME0 302 aa11.69□□□□□ -0.54
TRIM59-201ENST00000309784 TAS2R40P59535 323 aa11.69□□□□□ -0.54
TRIM59-201ENST00000309784 C15orf59Q2T9L4 293 aaPredicted RBP11.69□□□□□ -0.54
TRIM59-201ENST00000309784 PLEKHG4Q58EX7 1191 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms