RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 ZBED8Q8IZ13 594 aa16.99■□□□□ 0.31
CCDC8-201ENST00000307522 TCP10LQ8TDR4 215 aa16.99■□□□□ 0.31
CCDC8-201ENST00000307522 SLC26A7Q8TE54 656 aa16.99■□□□□ 0.31
CCDC8-201ENST00000307522 GPRC5DQ9NZD1 345 aa16.99■□□□□ 0.31
CCDC8-201ENST00000307522 ANKFY1Q9P2R3 1169 aa16.99■□□□□ 0.31
CCDC8-201ENST00000307522 PPARGC1AQ9UBK2 798 aaKnown RBP16.99■□□□□ 0.31
CCDC8-201ENST00000307522 ZNF180Q9UJW8 692 aa16.99■□□□□ 0.31
CCDC8-201ENST00000307522 ZMYM2Q9UBW7 1377 aa16.98■□□□□ 0.31
CCDC8-201ENST00000307522 PSMD7P51665 324 aa16.98■□□□□ 0.31
CCDC8-201ENST00000307522 ARL4CP56559 192 aa16.98■□□□□ 0.31
CCDC8-201ENST00000307522 ORC2Q13416 577 aaPredicted RBP16.98■□□□□ 0.31
CCDC8-201ENST00000307522 HYIQ5T013 277 aa16.98■□□□□ 0.31
CCDC8-201ENST00000307522 POU5F2Q8N7G0 328 aa16.98■□□□□ 0.31
CCDC8-201ENST00000307522 MIPOL1Q8TD10 442 aa16.98■□□□□ 0.31
CCDC8-201ENST00000307522 CYP4F11Q9HBI6 524 aa16.98■□□□□ 0.31
CCDC8-201ENST00000307522 ZNF212Q9UDV6 495 aa16.98■□□□□ 0.31
CCDC8-201ENST00000307522 BGNP21810 368 aa16.98■□□□□ 0.31
CCDC8-201ENST00000307522 YWHABP31946 246 aaKnown RBP16.98■□□□□ 0.31
CCDC8-201ENST00000307522 ZNF280AP59817 542 aaPredicted RBP16.98■□□□□ 0.31
CCDC8-201ENST00000307522 GRAMD1BQ3KR37 738 aa16.98■□□□□ 0.31
CCDC8-201ENST00000307522 NACC1Q96RE7 527 aa16.98■□□□□ 0.31
CCDC8-201ENST00000307522 TLE6Q9H808 572 aa16.98■□□□□ 0.31
CCDC8-201ENST00000307522 AGO4Q9HCK5 861 aaKnown RBP16.98■□□□□ 0.31
CCDC8-201ENST00000307522 TOPORSQ9NS56 1045 aaPredicted RBP16.98■□□□□ 0.31
CCDC8-201ENST00000307522 LARSQ9P2J5 1176 aaKnown RBP16.98■□□□□ 0.31
CCDC8-201ENST00000307522 USTQ9Y2C2 406 aa16.98■□□□□ 0.31
CCDC8-201ENST00000307522 FZD9O00144 591 aa16.98■□□□□ 0.31
CCDC8-201ENST00000307522 TRAFD1O14545 582 aaPredicted RBP16.98■□□□□ 0.31
CCDC8-201ENST00000307522 DHX15O43143 795 aaKnown RBP16.98■□□□□ 0.31
CCDC8-201ENST00000307522 TBC1D12O60347 775 aa16.98■□□□□ 0.31
CCDC8-201ENST00000307522 GAS8O95995 478 aa16.98■□□□□ 0.31
CCDC8-201ENST00000307522 FMO5P49326 533 aa16.98■□□□□ 0.31
CCDC8-201ENST00000307522 ATXN3P54252 364 aaPredicted RBP16.98■□□□□ 0.31
CCDC8-201ENST00000307522 ALDH18A1P54886 795 aaKnown RBP16.98■□□□□ 0.31
CCDC8-201ENST00000307522 GPC5P78333 572 aa16.98■□□□□ 0.31
CCDC8-201ENST00000307522 MTERF2Q49AM1 385 aa16.98■□□□□ 0.31
CCDC8-201ENST00000307522 IYDQ6PHW0 289 aa16.98■□□□□ 0.31
CCDC8-201ENST00000307522 NAP1L4Q99733 375 aaKnown RBP16.98■□□□□ 0.31
CCDC8-201ENST00000307522 STK33Q9BYT3 514 aa16.98■□□□□ 0.31
CCDC8-201ENST00000307522 SLC7A8Q9UHI5 535 aa16.98■□□□□ 0.31
CCDC8-201ENST00000307522 ANGPTL2Q9UKU9 493 aa16.98■□□□□ 0.31
CCDC8-201ENST00000307522 DIS3Q9Y2L1 958 aaKnown RBP16.98■□□□□ 0.31
CCDC8-201ENST00000307522 PI4K2BG5E9Z4 385 aa16.97■□□□□ 0.31
CCDC8-201ENST00000307522 PDIA2Q13087 525 aaKnown RBP16.97■□□□□ 0.31
CCDC8-201ENST00000307522 MED21Q13503 144 aa16.97■□□□□ 0.31
CCDC8-201ENST00000307522 MMEL1Q495T6 779 aa16.97■□□□□ 0.31
CCDC8-201ENST00000307522 DPY19L2Q6NUT2 758 aa16.97■□□□□ 0.31
CCDC8-201ENST00000307522 SESTD1Q86VW0 696 aa16.97■□□□□ 0.31
CCDC8-201ENST00000307522 ACSF2Q96CM8 615 aaPredicted RBP16.97■□□□□ 0.31
CCDC8-201ENST00000307522 CCDC97Q96F63 343 aaPredicted RBP16.97■□□□□ 0.31
CCDC8-201ENST00000307522 PXMP2Q9NR77 195 aa16.97■□□□□ 0.31
CCDC8-201ENST00000307522 POLR2AP24928 1970 aaKnown RBP16.97■□□□□ 0.31
CCDC8-201ENST00000307522 DCAF8L1A6NGE4 600 aa16.97■□□□□ 0.31
CCDC8-201ENST00000307522 IFNB1P01574 187 aa16.97■□□□□ 0.31
CCDC8-201ENST00000307522 NELFEP18615 380 aaKnown RBP16.97■□□□□ 0.31
CCDC8-201ENST00000307522 ITIH2P19823 946 aa16.97■□□□□ 0.31
CCDC8-201ENST00000307522 RASA2Q15283 850 aa16.97■□□□□ 0.31
CCDC8-201ENST00000307522 CDR2LQ86X02 465 aaPredicted RBP16.97■□□□□ 0.31
CCDC8-201ENST00000307522 NCSTNQ92542 709 aa16.97■□□□□ 0.31
CCDC8-201ENST00000307522 MECRQ9BV79 373 aa16.97■□□□□ 0.31
CCDC8-201ENST00000307522 WHRNQ9P202 907 aa16.97■□□□□ 0.31
CCDC8-201ENST00000307522 SEPT9Q9UHD8 586 aaPredicted RBP16.97■□□□□ 0.31
CCDC8-201ENST00000307522 A0A1B0GTW7 788 aa16.96■□□□□ 0.31
CCDC8-201ENST00000307522 TRPA1O75762 1119 aa16.96■□□□□ 0.31
CCDC8-201ENST00000307522 POTEJP0CG39 1038 aa16.96■□□□□ 0.31
CCDC8-201ENST00000307522 SSTR1P30872 391 aa16.96■□□□□ 0.31
CCDC8-201ENST00000307522 SP2Q02086 613 aa16.96■□□□□ 0.31
CCDC8-201ENST00000307522 EDRF1Q3B7T1 1238 aa16.96■□□□□ 0.31
CCDC8-201ENST00000307522 FBXL19Q6PCT2 694 aa16.96■□□□□ 0.31
CCDC8-201ENST00000307522 RNF111Q6ZNA4 994 aa16.96■□□□□ 0.31
CCDC8-201ENST00000307522 SLC47A2Q86VL8 602 aa16.96■□□□□ 0.31
CCDC8-201ENST00000307522 OR6Y1Q8NGX8 325 aa16.96■□□□□ 0.31
CCDC8-201ENST00000307522 TMEM143Q96AN5 459 aa16.96■□□□□ 0.31
CCDC8-201ENST00000307522 CEP170P1Q96L14 293 aa16.96■□□□□ 0.31
CCDC8-201ENST00000307522 NR1H4Q96RI1 486 aaPredicted RBP16.96■□□□□ 0.31
CCDC8-201ENST00000307522 TRIM55Q9BYV6 548 aa16.96■□□□□ 0.31
CCDC8-201ENST00000307522 PFDN4Q9NQP4 134 aa16.96■□□□□ 0.31
CCDC8-201ENST00000307522 TBX3O15119 743 aa16.96■□□□□ 0.31
CCDC8-201ENST00000307522 TPD52L2O43399 206 aaKnown RBP16.96■□□□□ 0.31
CCDC8-201ENST00000307522 PENKP01210 267 aaPredicted RBP16.96■□□□□ 0.31
CCDC8-201ENST00000307522 RALAP11233 206 aa16.96■□□□□ 0.31
CCDC8-201ENST00000307522 CD58P19256 250 aa16.96■□□□□ 0.31
CCDC8-201ENST00000307522 SLC25A3Q00325 362 aa16.96■□□□□ 0.31
CCDC8-201ENST00000307522 ASPHQ12797 758 aa16.96■□□□□ 0.31
CCDC8-201ENST00000307522 ALCAMQ13740 583 aa16.96■□□□□ 0.31
CCDC8-201ENST00000307522 TRIM50Q86XT4 487 aa16.96■□□□□ 0.31
CCDC8-201ENST00000307522 RNF168Q8IYW5 571 aaPredicted RBP16.96■□□□□ 0.31
CCDC8-201ENST00000307522 MTBPQ96DY7 904 aa16.96■□□□□ 0.31
CCDC8-201ENST00000307522 KLRG1Q96E93 195 aa16.96■□□□□ 0.31
CCDC8-201ENST00000307522 TSSK1BQ9BXA7 367 aa16.96■□□□□ 0.31
CCDC8-201ENST00000307522 MAF1Q9H063 256 aa16.96■□□□□ 0.31
CCDC8-201ENST00000307522 MIF4GDA9UHW6 222 aaKnown RBP16.96■□□□□ 0.31
CCDC8-201ENST00000307522 CALUO43852 315 aaPredicted RBP16.96■□□□□ 0.31
CCDC8-201ENST00000307522 CDK4P11802 303 aa16.96■□□□□ 0.31
CCDC8-201ENST00000307522 PLCB3Q01970 1234 aa16.96■□□□□ 0.31
CCDC8-201ENST00000307522 TRIP10Q15642 601 aa16.96■□□□□ 0.31
CCDC8-201ENST00000307522 GJC2Q5T442 439 aaPredicted RBP16.96■□□□□ 0.31
CCDC8-201ENST00000307522 KLHDC10Q6PID8 442 aa16.96■□□□□ 0.31
CCDC8-201ENST00000307522 ZNF720Q7Z2F6 126 aa16.96■□□□□ 0.31
CCDC8-201ENST00000307522 NLRX1Q86UT6 975 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms