RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 ALOX12P18054 663 aa13.11□□□□□ -0.31
USP38-201ENST00000307017 BAATQ14032 418 aaPredicted RBP13.11□□□□□ -0.31
USP38-201ENST00000307017 SLC47A2Q86VL8 602 aa13.11□□□□□ -0.31
USP38-201ENST00000307017 NSUN6Q8TEA1 469 aaKnown RBP13.11□□□□□ -0.31
USP38-201ENST00000307017 PMM1Q92871 262 aa13.11□□□□□ -0.31
USP38-201ENST00000307017 CCDC134Q9H6E4 229 aa13.11□□□□□ -0.31
USP38-201ENST00000307017 ZMYM5Q9UJ78 669 aa13.11□□□□□ -0.31
USP38-201ENST00000307017 KDM5CP41229 1560 aa13.11□□□□□ -0.31
USP38-201ENST00000307017 PCP4L1A6NKN8 68 aa13.11□□□□□ -0.31
USP38-201ENST00000307017 KIF1CO43896 1103 aaKnown RBP13.11□□□□□ -0.31
USP38-201ENST00000307017 HLA-DRAP01903 254 aa13.11□□□□□ -0.31
USP38-201ENST00000307017 GFM2Q969S9 779 aaKnown RBP13.11□□□□□ -0.31
USP38-201ENST00000307017 FARP1Q9Y4F1 1045 aaPredicted RBP13.11□□□□□ -0.31
USP38-201ENST00000307017 ADGBQ8N7X0 1667 aa13.11□□□□□ -0.31
USP38-201ENST00000307017 PSMC3P17980 439 aa13.11□□□□□ -0.31
USP38-201ENST00000307017 GEMIN4P57678 1058 aaKnown RBP13.11□□□□□ -0.31
USP38-201ENST00000307017 RDM1Q8NG50 284 aa13.11□□□□□ -0.31
USP38-201ENST00000307017 UBAP1Q9NZ09 502 aa13.11□□□□□ -0.31
USP38-201ENST00000307017 ZNF609O15014 1411 aa13.11□□□□□ -0.31
USP38-201ENST00000307017 ABCC2Q92887 1545 aa13.11□□□□□ -0.31
USP38-201ENST00000307017 MAGP20916 626 aa13.11□□□□□ -0.31
USP38-201ENST00000307017 MAPK9P45984 424 aa13.11□□□□□ -0.31
USP38-201ENST00000307017 MAP3K10Q02779 954 aa13.11□□□□□ -0.31
USP38-201ENST00000307017 COX10Q12887 443 aa13.11□□□□□ -0.31
USP38-201ENST00000307017 RSBN1Q5VWQ0 802 aaPredicted RBP13.11□□□□□ -0.31
USP38-201ENST00000307017 CENPPQ6IPU0 288 aa13.11□□□□□ -0.31
USP38-201ENST00000307017 RIPOR1Q6ZS17 1223 aa13.11□□□□□ -0.31
USP38-201ENST00000307017 AGGF1Q8N302 714 aaeCLIP13.11□□□□□ -0.31
USP38-201ENST00000307017 DDHD1Q8NEL9 900 aa13.11□□□□□ -0.31
USP38-201ENST00000307017 ZC3H15Q8WU90 426 aaKnown RBP13.11□□□□□ -0.31
USP38-201ENST00000307017 TRIM45Q9H8W5 580 aaPredicted RBP13.11□□□□□ -0.31
USP38-201ENST00000307017 SLC37A4O43826 429 aa13.1□□□□□ -0.31
USP38-201ENST00000307017 MFN2O95140 757 aa13.1□□□□□ -0.31
USP38-201ENST00000307017 PLK1P53350 603 aa13.1□□□□□ -0.31
USP38-201ENST00000307017 PSMC6P62333 389 aa13.1□□□□□ -0.31
USP38-201ENST00000307017 IRX1P78414 480 aaPredicted RBP13.1□□□□□ -0.31
USP38-201ENST00000307017 NAGPAQ9UK23 515 aa13.1□□□□□ -0.31
USP38-201ENST00000307017 DDX3XO00571 662 aaKnown RBP eCLIP13.1□□□□□ -0.312e-7■■■■■ 26.8
USP38-201ENST00000307017 ATP6V1G2O95670 118 aa13.1□□□□□ -0.31
USP38-201ENST00000307017 STAU1O95793 577 aaKnown RBP13.1□□□□□ -0.31
USP38-201ENST00000307017 APOA4P06727 396 aa13.1□□□□□ -0.31
USP38-201ENST00000307017 SRGNP10124 158 aa13.1□□□□□ -0.31
USP38-201ENST00000307017 RFC5P40937 340 aa13.1□□□□□ -0.31
USP38-201ENST00000307017 FOXO4P98177 505 aa13.1□□□□□ -0.31
USP38-201ENST00000307017 LRRC8BQ6P9F7 803 aa13.1□□□□□ -0.31
USP38-201ENST00000307017 FRMD5Q7Z6J6 570 aa13.1□□□□□ -0.31
USP38-201ENST00000307017 CARNMT1Q8N4J0 409 aa13.1□□□□□ -0.31
USP38-201ENST00000307017 EMC1Q8N766 993 aa13.1□□□□□ -0.31
USP38-201ENST00000307017 TDRD5Q8NAT2 981 aaKnown RBP13.1□□□□□ -0.31
USP38-201ENST00000307017 FHDC1Q9C0D6 1143 aaPredicted RBP13.1□□□□□ -0.31
USP38-201ENST00000307017 SLC30A1Q9Y6M5 507 aa13.1□□□□□ -0.31
USP38-201ENST00000307017 A0A1B0GTH6 734 aa13.1□□□□□ -0.31
USP38-201ENST00000307017 F8W810 466 aa13.1□□□□□ -0.31
USP38-201ENST00000307017 ZNF37AP17032 561 aaPredicted RBP13.1□□□□□ -0.31
USP38-201ENST00000307017 TGM2P21980 687 aa13.1□□□□□ -0.31
USP38-201ENST00000307017 POM121L1PQ3SYA9 428 aa13.1□□□□□ -0.31
USP38-201ENST00000307017 EFCAB12Q6NXP0 572 aa13.1□□□□□ -0.31
USP38-201ENST00000307017 SCUBE1Q8IWY4 988 aa13.1□□□□□ -0.31
USP38-201ENST00000307017 ZNF579Q8NAF0 562 aaKnown RBP13.1□□□□□ -0.31
USP38-201ENST00000307017 MCPH1Q8NEM0 835 aa13.1□□□□□ -0.31
USP38-201ENST00000307017 PAIP1Q9H074 479 aaKnown RBP13.1□□□□□ -0.31
USP38-201ENST00000307017 PRIM2P49643 509 aa13.1□□□□□ -0.31
USP38-201ENST00000307017 ALCAMQ13740 583 aa13.1□□□□□ -0.31
USP38-201ENST00000307017 DGKDQ16760 1214 aa13.1□□□□□ -0.31
USP38-201ENST00000307017 DNAL1Q4LDG9 190 aa13.1□□□□□ -0.31
USP38-201ENST00000307017 PDPK2PQ6A1A2 396 aa13.1□□□□□ -0.31
USP38-201ENST00000307017 MIB1Q86YT6 1006 aa13.1□□□□□ -0.31
USP38-201ENST00000307017 UNC45BQ8IWX7 931 aa13.1□□□□□ -0.31
USP38-201ENST00000307017 USP38Q8NB14 1042 aa13.1□□□□□ -0.31
USP38-201ENST00000307017 TRIM9Q9C026 710 aa13.1□□□□□ -0.31
USP38-201ENST00000307017 SATB2Q9UPW6 733 aa13.1□□□□□ -0.31
USP38-201ENST00000307017 ATXN2Q99700 1313 aaKnown RBP13.1□□□□□ -0.31
USP38-201ENST00000307017 F8W8V4 182 aa13.1□□□□□ -0.31
USP38-201ENST00000307017 BFSP2Q13515 415 aa13.1□□□□□ -0.31
USP38-201ENST00000307017 CSHL1Q14406 222 aa13.1□□□□□ -0.31
USP38-201ENST00000307017 PPP1R26Q5T8A7 1209 aaPredicted RBP13.1□□□□□ -0.31
USP38-201ENST00000307017 ZNF57Q68EA5 555 aaPredicted RBP13.1□□□□□ -0.31
USP38-201ENST00000307017 SLC20A1Q8WUM9 679 aa13.1□□□□□ -0.31
USP38-201ENST00000307017 CMTM5Q96DZ9 223 aa13.1□□□□□ -0.31
USP38-201ENST00000307017 M0QYT0 321 aa13.09□□□□□ -0.31
USP38-201ENST00000307017 BANF1O75531 89 aa13.09□□□□□ -0.31
USP38-201ENST00000307017 AP3B2Q13367 1082 aa13.09□□□□□ -0.31
USP38-201ENST00000307017 ARHGEF7Q14155 803 aa13.09□□□□□ -0.31
USP38-201ENST00000307017 ASAP3Q8TDY4 903 aa13.09□□□□□ -0.31
USP38-201ENST00000307017 CELF6Q96J87 481 aaKnown RBP13.09□□□□□ -0.31
USP38-201ENST00000307017 OLFM1Q99784 485 aa13.09□□□□□ -0.31
USP38-201ENST00000307017 CNGB3Q9NQW8 809 aa13.09□□□□□ -0.31
USP38-201ENST00000307017 TIMM13Q9Y5L4 95 aaPredicted RBP13.09□□□□□ -0.31
USP38-201ENST00000307017 CAPN6Q9Y6Q1 641 aa13.09□□□□□ -0.31
USP38-201ENST00000307017 TBX3O15119 743 aa13.09□□□□□ -0.31
USP38-201ENST00000307017 FAM20BO75063 409 aa13.09□□□□□ -0.31
USP38-201ENST00000307017 CYP2B6P20813 491 aa13.09□□□□□ -0.31
USP38-201ENST00000307017 RAB14P61106 215 aa13.09□□□□□ -0.31
USP38-201ENST00000307017 NFYCQ13952 458 aa13.09□□□□□ -0.31
USP38-201ENST00000307017 ERAP2Q6P179 960 aa13.09□□□□□ -0.31
USP38-201ENST00000307017 NLGN1Q8N2Q7 840 aa13.09□□□□□ -0.31
USP38-201ENST00000307017 ANKRD7Q92527 254 aa13.09□□□□□ -0.31
USP38-201ENST00000307017 RUSC1Q9BVN2 902 aa13.09□□□□□ -0.31
USP38-201ENST00000307017 ATXN3LQ9H3M9 355 aa13.09□□□□□ -0.31
USP38-201ENST00000307017 FZD1Q9UP38 647 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms