RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 CPVLQ9H3G5 476 aa8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 MAP10Q9P2G4 905 aa8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 DFFAO00273 331 aa8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 MOCS2O96007 188 aaPredicted RBP8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 MGAT5BQ3V5L5 792 aa8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 CCNYL1Q8N7R7 359 aa8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 SLC5A5Q92911 643 aa8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 SAAL1Q96ER3 474 aa8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 MRPL48Q96GC5 212 aaKnown RBP8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 NUP85Q9BW27 656 aa8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 AGXT2Q9BYV1 514 aa8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 LAMB1P07942 1786 aa8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 MOXD2PA6NHM9 499 aa8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 DUSP11O75319 330 aaKnown RBP8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 CENPAP49450 140 aa8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 ATXN3P54252 364 aaPredicted RBP8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 RBL2Q08999 1139 aa8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 MFSD4BQ5TF39 518 aa8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 MUC3BQ9H195 1237 aa8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 ATP8B1O43520 1251 aa8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 TLR2O60603 784 aa8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 SPAG6O75602 509 aa8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 GRK4P32298 578 aa8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 HIST2H2ACQ16777 129 aaPredicted RBP8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 BOLA3Q53S33 107 aa8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 CCDC157Q569K6 752 aa8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 HIST2H2AA3Q6FI13 130 aa8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 VPS37AQ8NEZ2 397 aa8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 UBXN6Q9BZV1 441 aa8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 RSAD1Q9HA92 442 aa8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 WDR91A4D1P6 747 aa8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 CAND2O75155 1236 aa8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 CELF3Q5SZQ8 465 aaKnown RBP8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 ATPAF2Q8N5M1 289 aa8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 MYRIPQ8NFW9 859 aa8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 SLC7A14Q8TBB6 771 aa8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 BRD8Q9H0E9 1235 aa8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 TMEM134Q9H6X4 195 aa8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 SLC25A13Q9UJS0 675 aa8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 SLC30A1Q9Y6M5 507 aa8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 KNL1Q8NG31 2342 aa8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 ACKR2O00590 384 aa8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 PPP3CCP48454 512 aa8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 NPEPPSP55786 919 aa8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 LAMTOR4Q0VGL1 99 aa8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 DEPDC1Q5TB30 811 aa8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 GPT2Q8TD30 523 aa8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 NAT9Q9BTE0 207 aa8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 INTS2Q9H0H0 1204 aaKnown RBP8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 PPARGC1AQ9UBK2 798 aaKnown RBP8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 IRF6O14896 467 aa8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 AVPR1AP37288 418 aa8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 ROR1Q01973 937 aa8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 DHX34Q14147 1143 aaKnown RBP8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 SPDYAQ5MJ70 313 aa8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 SPRYD7Q5W111 196 aa8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 ZNF544Q6NX49 715 aa8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 VSIG10LQ86VR7 867 aa8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 SEPT5Q99719 369 aaPredicted RBP8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 SIK2Q9H0K1 926 aa8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 TMEM245Q9H330 911 aa8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 ADAMTS1Q9UHI8 967 aa8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 EIF2S1P05198 315 aaKnown RBP8.66□□□□□ -1.02
PCDHB1-201ENST00000306549 LRRC74AQ0VAA2 488 aa8.66□□□□□ -1.02
PCDHB1-201ENST00000306549 ANKRD40Q6AI12 368 aa8.66□□□□□ -1.02
PCDHB1-201ENST00000306549 OXER1Q8TDS5 423 aa8.66□□□□□ -1.02
PCDHB1-201ENST00000306549 SAYSD1Q9NPB0 183 aa8.66□□□□□ -1.02
PCDHB1-201ENST00000306549 PRG3Q9Y2Y8 225 aaPredicted RBP8.66□□□□□ -1.02
PCDHB1-201ENST00000306549 KLRK1P26718 216 aa8.66□□□□□ -1.02
PCDHB1-201ENST00000306549 PDAP1Q13442 181 aaKnown RBP8.66□□□□□ -1.02
PCDHB1-201ENST00000306549 FASTKD1Q53R41 847 aaKnown RBP8.66□□□□□ -1.02
PCDHB1-201ENST00000306549 EMBQ6PCB8 327 aa8.66□□□□□ -1.02
PCDHB1-201ENST00000306549 TMC7Q7Z402 723 aa8.66□□□□□ -1.02
PCDHB1-201ENST00000306549 C1orf131Q8NDD1 294 aaKnown RBP8.66□□□□□ -1.02
PCDHB1-201ENST00000306549 TNIP2Q8NFZ5 429 aa8.66□□□□□ -1.02
PCDHB1-201ENST00000306549 UPF1Q92900 1129 aaKnown RBP eCLIP8.66□□□□□ -1.02
PCDHB1-201ENST00000306549 C3orf70A6NLC5 250 aaPredicted RBP8.66□□□□□ -1.02
PCDHB1-201ENST00000306549 IGF2BP3O00425 579 aaKnown RBP eCLIP8.66□□□□□ -1.02
PCDHB1-201ENST00000306549 NDUFB5O43674 189 aa8.66□□□□□ -1.02
PCDHB1-201ENST00000306549 LIG3P49916 1009 aa8.66□□□□□ -1.02
PCDHB1-201ENST00000306549 IFT88Q13099 833 aa8.66□□□□□ -1.02
PCDHB1-201ENST00000306549 TMED1Q13445 227 aa8.66□□□□□ -1.02
PCDHB1-201ENST00000306549 EXD1Q8NHP7 514 aa8.66□□□□□ -1.02
PCDHB1-201ENST00000306549 ADA2Q9NZK5 511 aa8.66□□□□□ -1.02
PCDHB1-201ENST00000306549 KIAA1217Q5T5P2 1943 aa8.66□□□□□ -1.02
PCDHB1-201ENST00000306549 H2AFYO75367 372 aaKnown RBP8.66□□□□□ -1.02
PCDHB1-201ENST00000306549 PGK2P07205 417 aa8.66□□□□□ -1.02
PCDHB1-201ENST00000306549 JAK1P23458 1154 aa8.66□□□□□ -1.02
PCDHB1-201ENST00000306549 PTPN11Q06124 597 aaPredicted RBP8.66□□□□□ -1.02
PCDHB1-201ENST00000306549 FBXO47Q5MNV8 452 aa8.66□□□□□ -1.02
PCDHB1-201ENST00000306549 MTHFD1LQ6UB35 978 aa8.66□□□□□ -1.02
PCDHB1-201ENST00000306549 ZNF555Q8NEP9 628 aa8.66□□□□□ -1.02
PCDHB1-201ENST00000306549 PRPF18Q99633 342 aaKnown RBP8.66□□□□□ -1.02
PCDHB1-201ENST00000306549 KCPQ6ZWJ8 1503 aa8.66□□□□□ -1.02
PCDHB1-201ENST00000306549 ZNFX1Q9P2E3 1918 aaKnown RBP8.66□□□□□ -1.02
PCDHB1-201ENST00000306549 A0A087WZ62 844 aa8.66□□□□□ -1.02
PCDHB1-201ENST00000306549 CTIFO43310 598 aaKnown RBP8.66□□□□□ -1.02
PCDHB1-201ENST00000306549 NDUFS3O75489 264 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms