RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 RGPD2P0DJD1 1756 aa13.85□□□□□ -0.19
DDX54-201ENST00000306014 SETD1AO15047 1707 aaKnown RBP13.85□□□□□ -0.19
DDX54-201ENST00000306014 ENO3P13929 434 aaPredicted RBP13.85□□□□□ -0.19
DDX54-201ENST00000306014 ATF7IP2Q5U623 682 aa13.85□□□□□ -0.19
DDX54-201ENST00000306014 TTC27Q6P3X3 843 aa13.85□□□□□ -0.19
DDX54-201ENST00000306014 C15orf52Q6ZUT6 534 aaKnown RBP13.85□□□□□ -0.19
DDX54-201ENST00000306014 GPATCH2LQ9NWQ4 482 aa13.85□□□□□ -0.19
DDX54-201ENST00000306014 IPO11Q9UI26 975 aaKnown RBP13.85□□□□□ -0.19
DDX54-201ENST00000306014 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.85□□□□□ -0.19
DDX54-201ENST00000306014 KLHL2O95198 593 aa13.85□□□□□ -0.19
DDX54-201ENST00000306014 SLC4A1P02730 911 aa13.85□□□□□ -0.19
DDX54-201ENST00000306014 JAM2P57087 298 aa13.85□□□□□ -0.19
DDX54-201ENST00000306014 SCUBE1Q8IWY4 988 aa13.85□□□□□ -0.19
DDX54-201ENST00000306014 CGRRF1Q99675 332 aa13.85□□□□□ -0.19
DDX54-201ENST00000306014 IDI2Q9BXS1 227 aa13.85□□□□□ -0.19
DDX54-201ENST00000306014 RNPEPL1Q9HAU8 725 aa13.85□□□□□ -0.19
DDX54-201ENST00000306014 FNDC3AQ9Y2H6 1198 aaKnown RBP13.85□□□□□ -0.19
DDX54-201ENST00000306014 FSCN2O14926 492 aa13.85□□□□□ -0.19
DDX54-201ENST00000306014 TM9SF1O15321 606 aa13.85□□□□□ -0.19
DDX54-201ENST00000306014 EEF1B2P24534 225 aaKnown RBP13.85□□□□□ -0.19
DDX54-201ENST00000306014 HOXA10P31260 410 aaPredicted RBP13.85□□□□□ -0.19
DDX54-201ENST00000306014 CYTH1Q15438 398 aa13.85□□□□□ -0.19
DDX54-201ENST00000306014 RNF135Q8IUD6 432 aa13.85□□□□□ -0.19
DDX54-201ENST00000306014 APOBEC3FQ8IUX4 373 aaKnown RBP13.85□□□□□ -0.19
DDX54-201ENST00000306014 MAP4K3Q8IVH8 894 aa13.85□□□□□ -0.19
DDX54-201ENST00000306014 ZBTB45Q96K62 511 aaPredicted RBP13.85□□□□□ -0.19
DDX54-201ENST00000306014 STAP1Q9ULZ2 295 aa13.85□□□□□ -0.19
DDX54-201ENST00000306014 SLIT2O94813 1529 aa13.84□□□□□ -0.19
DDX54-201ENST00000306014 DEUP1Q05D60 604 aa13.84□□□□□ -0.19
DDX54-201ENST00000306014 SLC12A1Q13621 1099 aa13.84□□□□□ -0.19
DDX54-201ENST00000306014 KIF19Q2TAC6 998 aa13.84□□□□□ -0.19
DDX54-201ENST00000306014 FASTKD1Q53R41 847 aaKnown RBP13.84□□□□□ -0.19
DDX54-201ENST00000306014 ZNF280CQ8ND82 737 aa13.84□□□□□ -0.19
DDX54-201ENST00000306014 TBC1D10AQ9BXI6 508 aa13.84□□□□□ -0.19
DDX54-201ENST00000306014 MAGEA13PA6NCF6 341 aa13.84□□□□□ -0.19
DDX54-201ENST00000306014 SPDYE2BA6NHP3 402 aa13.84□□□□□ -0.19
DDX54-201ENST00000306014 HUS1O60921 280 aa13.84□□□□□ -0.19
DDX54-201ENST00000306014 ENTPD5O75356 428 aa13.84□□□□□ -0.19
DDX54-201ENST00000306014 ITGB3P05106 788 aa13.84□□□□□ -0.19
DDX54-201ENST00000306014 SPDYE6P0CI01 402 aa13.84□□□□□ -0.19
DDX54-201ENST00000306014 GNAT1P11488 350 aa13.84□□□□□ -0.19
DDX54-201ENST00000306014 RANBP1P43487 201 aa13.84□□□□□ -0.19
DDX54-201ENST00000306014 EFHC2Q5JST6 749 aa13.84□□□□□ -0.19
DDX54-201ENST00000306014 RAB44Q7Z6P3 723 aaPredicted RBP13.84□□□□□ -0.19
DDX54-201ENST00000306014 SLC26A11Q86WA9 606 aa13.84□□□□□ -0.19
DDX54-201ENST00000306014 CMTM5Q96DZ9 223 aa13.84□□□□□ -0.19
DDX54-201ENST00000306014 DISP2A7MBM2 1401 aa13.84□□□□□ -0.19
DDX54-201ENST00000306014 BCL9LQ86UU0 1499 aa13.84□□□□□ -0.19
DDX54-201ENST00000306014 FCHO1O14526 889 aa13.84□□□□□ -0.19
DDX54-201ENST00000306014 ATP9AO75110 1047 aa13.84□□□□□ -0.19
DDX54-201ENST00000306014 RFC5P40937 340 aa13.84□□□□□ -0.19
DDX54-201ENST00000306014 RAP1GAPP47736 663 aa13.84□□□□□ -0.19
DDX54-201ENST00000306014 PGM5Q15124 567 aa13.84□□□□□ -0.19
DDX54-201ENST00000306014 WASHC2DQ5SRD0 308 aa13.84□□□□□ -0.19
DDX54-201ENST00000306014 XRRA1Q6P2D8 792 aa13.84□□□□□ -0.19
DDX54-201ENST00000306014 SLC25A41Q8N5S1 370 aa13.84□□□□□ -0.19
DDX54-201ENST00000306014 BEST2Q8NFU1 509 aa13.84□□□□□ -0.19
DDX54-201ENST00000306014 VPS39Q96JC1 886 aa13.84□□□□□ -0.19
DDX54-201ENST00000306014 KREMEN1Q96MU8 473 aa13.84□□□□□ -0.19
DDX54-201ENST00000306014 PXMP2Q9NR77 195 aa13.84□□□□□ -0.19
DDX54-201ENST00000306014 OGTO15294 1046 aa13.83□□□□□ -0.19
DDX54-201ENST00000306014 PDGFRBP09619 1106 aa13.83□□□□□ -0.19
DDX54-201ENST00000306014 TM4SF1P30408 202 aa13.83□□□□□ -0.19
DDX54-201ENST00000306014 COPAP53621 1224 aa13.83□□□□□ -0.19
DDX54-201ENST00000306014 KLC3Q6P597 504 aa13.83□□□□□ -0.19
DDX54-201ENST00000306014 SLFN11Q7Z7L1 901 aa13.83□□□□□ -0.19
DDX54-201ENST00000306014 KATNAL2Q8IYT4 538 aa13.83□□□□□ -0.19
DDX54-201ENST00000306014 RNF168Q8IYW5 571 aaPredicted RBP13.83□□□□□ -0.19
DDX54-201ENST00000306014 PRPF31Q8WWY3 499 aaKnown RBP13.83□□□□□ -0.19
DDX54-201ENST00000306014 TLCD1Q96CP7 247 aa13.83□□□□□ -0.19
DDX54-201ENST00000306014 KCNK16Q96T55 309 aa13.83□□□□□ -0.19
DDX54-201ENST00000306014 BTBD10Q9BSF8 475 aa13.83□□□□□ -0.19
DDX54-201ENST00000306014 A8MUI8 341 aa13.83□□□□□ -0.2
DDX54-201ENST00000306014 BANF1O75531 89 aa13.83□□□□□ -0.2
DDX54-201ENST00000306014 DGKIO75912 1065 aa13.83□□□□□ -0.2
DDX54-201ENST00000306014 TCN1P20061 433 aaPredicted RBP13.83□□□□□ -0.2
DDX54-201ENST00000306014 NAMPTP43490 491 aa13.83□□□□□ -0.2
DDX54-201ENST00000306014 RBP5P82980 135 aa13.83□□□□□ -0.2
DDX54-201ENST00000306014 GTF2BQ00403 316 aa13.83□□□□□ -0.2
DDX54-201ENST00000306014 DSG1Q02413 1049 aa13.83□□□□□ -0.2
DDX54-201ENST00000306014 TMEM132DQ14C87 1099 aa13.83□□□□□ -0.2
DDX54-201ENST00000306014 LACTB2Q53H82 288 aaPredicted RBP13.83□□□□□ -0.2
DDX54-201ENST00000306014 ZSWIM2Q8NEG5 633 aa13.83□□□□□ -0.2
DDX54-201ENST00000306014 SPDYE1Q8NFV5 336 aaPredicted RBP13.83□□□□□ -0.2
DDX54-201ENST00000306014 TMA16Q96EY4 203 aaKnown RBP13.83□□□□□ -0.2
DDX54-201ENST00000306014 NT5C1AQ9BXI3 368 aa13.83□□□□□ -0.2
DDX54-201ENST00000306014 FHDC1Q9C0D6 1143 aaPredicted RBP13.83□□□□□ -0.2
DDX54-201ENST00000306014 USP18Q9UMW8 372 aa13.83□□□□□ -0.2
DDX54-201ENST00000306014 GRIN3BO60391 1043 aa13.83□□□□□ -0.2
DDX54-201ENST00000306014 HSPA8P11142 646 aaKnown RBP13.83□□□□□ -0.2
DDX54-201ENST00000306014 CREB1P16220 341 aa13.83□□□□□ -0.2
DDX54-201ENST00000306014 ITGB5P18084 799 aa13.83□□□□□ -0.2
DDX54-201ENST00000306014 KCNV1Q6PIU1 500 aa13.83□□□□□ -0.2
DDX54-201ENST00000306014 IZUMO2Q6UXV1 221 aa13.83□□□□□ -0.2
DDX54-201ENST00000306014 TTC39CQ8N584 583 aa13.83□□□□□ -0.2
DDX54-201ENST00000306014 PIK3R5Q8WYR1 880 aa13.83□□□□□ -0.2
DDX54-201ENST00000306014 SDCCAG3Q96C92 435 aa13.83□□□□□ -0.2
DDX54-201ENST00000306014 SLC10A4Q96EP9 437 aa13.83□□□□□ -0.2
DDX54-201ENST00000306014 VCPIP1Q96JH7 1222 aa13.83□□□□□ -0.2
DDX54-201ENST00000306014 SIX2Q9NPC8 291 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms