RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 ADAMTS6Q9UKP5 1117 aa11.39□□□□□ -0.59
ZNF558-201ENST00000301475 ZNF536O15090 1300 aa11.38□□□□□ -0.59
ZNF558-201ENST00000301475 TMEM150BA6NC51 233 aa11.38□□□□□ -0.59
ZNF558-201ENST00000301475 PRR5-ARHGAP8B1AHC4 643 aa11.38□□□□□ -0.59
ZNF558-201ENST00000301475 SLC16A4O15374 487 aa11.38□□□□□ -0.59
ZNF558-201ENST00000301475 TLR3O15455 904 aaKnown RBP11.38□□□□□ -0.59
ZNF558-201ENST00000301475 ATP9BO43861 1147 aa11.38□□□□□ -0.59
ZNF558-201ENST00000301475 SORBS2O94875 1100 aaKnown RBP11.38□□□□□ -0.59
ZNF558-201ENST00000301475 CFBP00751 764 aa11.38□□□□□ -0.59
ZNF558-201ENST00000301475 UQCRBP14927 111 aa11.38□□□□□ -0.59
ZNF558-201ENST00000301475 CPOXP36551 454 aa11.38□□□□□ -0.59
ZNF558-201ENST00000301475 RPL7AP62424 266 aaKnown RBP11.38□□□□□ -0.59
ZNF558-201ENST00000301475 ARHGAP8P85298 464 aa11.38□□□□□ -0.59
ZNF558-201ENST00000301475 FAAP100Q0VG06 881 aa11.38□□□□□ -0.59
ZNF558-201ENST00000301475 PTK7Q13308 1070 aa11.38□□□□□ -0.59
ZNF558-201ENST00000301475 R3HDM1Q15032 1099 aaKnown RBP11.38□□□□□ -0.59
ZNF558-201ENST00000301475 FBXL19Q6PCT2 694 aa11.38□□□□□ -0.59
ZNF558-201ENST00000301475 B3GNT9Q6UX72 402 aa11.38□□□□□ -0.59
ZNF558-201ENST00000301475 ARID3BQ8IVW6 561 aaPredicted RBP11.38□□□□□ -0.59
ZNF558-201ENST00000301475 TRIM11Q96F44 468 aa11.38□□□□□ -0.59
ZNF558-201ENST00000301475 KCNK4Q9NYG8 393 aa11.38□□□□□ -0.59
ZNF558-201ENST00000301475 SAE1Q9UBE0 346 aaPredicted RBP11.38□□□□□ -0.59
ZNF558-201ENST00000301475 SNCAIPQ9Y6H5 919 aa11.38□□□□□ -0.59
ZNF558-201ENST00000301475 STK10O94804 968 aaKnown RBP11.38□□□□□ -0.59
ZNF558-201ENST00000301475 NDUFB10O96000 172 aa11.38□□□□□ -0.59
ZNF558-201ENST00000301475 GTF2BQ00403 316 aa11.38□□□□□ -0.59
ZNF558-201ENST00000301475 SLC18A2Q05940 514 aa11.38□□□□□ -0.59
ZNF558-201ENST00000301475 ZNF252P-AS1Q0IIN9 211 aa11.38□□□□□ -0.59
ZNF558-201ENST00000301475 BST1Q10588 318 aa11.38□□□□□ -0.59
ZNF558-201ENST00000301475 UBAP2LQ14157 1087 aaKnown RBP11.38□□□□□ -0.59
ZNF558-201ENST00000301475 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.38□□□□□ -0.59
ZNF558-201ENST00000301475 DNAL1Q4LDG9 190 aa11.38□□□□□ -0.59
ZNF558-201ENST00000301475 KYAT3Q6YP21 454 aaKnown RBP11.38□□□□□ -0.59
ZNF558-201ENST00000301475 ADGRG6Q86SQ4 1221 aa11.38□□□□□ -0.59
ZNF558-201ENST00000301475 IGDCC3Q8IVU1 814 aa11.38□□□□□ -0.59
ZNF558-201ENST00000301475 AGBL1Q96MI9 1066 aa11.38□□□□□ -0.59
ZNF558-201ENST00000301475 CCDC106Q9BWC9 280 aa11.38□□□□□ -0.59
ZNF558-201ENST00000301475 IVNS1ABPQ9Y6Y0 642 aa11.38□□□□□ -0.59
ZNF558-201ENST00000301475 CCDC195A0A1B0GUA6 201 aa11.38□□□□□ -0.59
ZNF558-201ENST00000301475 COQ9O75208 318 aa11.38□□□□□ -0.59
ZNF558-201ENST00000301475 KITP10721 976 aa11.38□□□□□ -0.59
ZNF558-201ENST00000301475 VCLP18206 1134 aa11.38□□□□□ -0.59
ZNF558-201ENST00000301475 YY1P25490 414 aa11.38□□□□□ -0.59
ZNF558-201ENST00000301475 HIRAP54198 1017 aaPredicted RBP11.38□□□□□ -0.59
ZNF558-201ENST00000301475 ALDH18A1P54886 795 aaKnown RBP11.38□□□□□ -0.59
ZNF558-201ENST00000301475 NOMO3P69849 1222 aa11.38□□□□□ -0.59
ZNF558-201ENST00000301475 ASPHQ12797 758 aa11.38□□□□□ -0.59
ZNF558-201ENST00000301475 NCOA4Q13772 614 aa11.38□□□□□ -0.59
ZNF558-201ENST00000301475 BBS9Q3SYG4 887 aa11.38□□□□□ -0.59
ZNF558-201ENST00000301475 OLFML2BQ68BL8 750 aa11.38□□□□□ -0.59
ZNF558-201ENST00000301475 CIAPIN1Q6FI81 312 aa11.38□□□□□ -0.59
ZNF558-201ENST00000301475 ISLR2Q6UXK2 745 aa11.38□□□□□ -0.59
ZNF558-201ENST00000301475 SPOCD1Q6ZMY3 1216 aa11.38□□□□□ -0.59
ZNF558-201ENST00000301475 CERS5Q8N5B7 392 aa11.38□□□□□ -0.59
ZNF558-201ENST00000301475 NAT8LQ8N9F0 302 aa11.38□□□□□ -0.59
ZNF558-201ENST00000301475 NKD2Q969F2 451 aaPredicted RBP11.38□□□□□ -0.59
ZNF558-201ENST00000301475 ZNF577Q9BSK1 485 aa11.38□□□□□ -0.59
ZNF558-201ENST00000301475 KIFC3Q9BVG8 833 aa11.38□□□□□ -0.59
ZNF558-201ENST00000301475 POLLQ9UGP5 575 aa11.38□□□□□ -0.59
ZNF558-201ENST00000301475 GGA1Q9UJY5 639 aa11.38□□□□□ -0.59
ZNF558-201ENST00000301475 CHMP2BQ9UQN3 213 aa11.38□□□□□ -0.59
ZNF558-201ENST00000301475 DRG1Q9Y295 367 aaKnown RBP11.38□□□□□ -0.59
ZNF558-201ENST00000301475 SMIM31A0A1B0GVY4 71 aa11.37□□□□□ -0.59
ZNF558-201ENST00000301475 E7ESA3 106 aa11.37□□□□□ -0.59
ZNF558-201ENST00000301475 VILLO15195 856 aa11.37□□□□□ -0.59
ZNF558-201ENST00000301475 FKBP6O75344 327 aa11.37□□□□□ -0.59
ZNF558-201ENST00000301475 TMCC1O94876 653 aa11.37□□□□□ -0.59
ZNF558-201ENST00000301475 ITGAVP06756 1048 aa11.37□□□□□ -0.59
ZNF558-201ENST00000301475 SCNN1DP51172 638 aa11.37□□□□□ -0.59
ZNF558-201ENST00000301475 PLCB3Q01970 1234 aa11.37□□□□□ -0.59
ZNF558-201ENST00000301475 GCNT1Q02742 428 aa11.37□□□□□ -0.59
ZNF558-201ENST00000301475 MAP7Q14244 749 aa11.37□□□□□ -0.59
ZNF558-201ENST00000301475 CEP55Q53EZ4 464 aa11.37□□□□□ -0.59
ZNF558-201ENST00000301475 PLEKHA7Q6IQ23 1121 aa11.37□□□□□ -0.59
ZNF558-201ENST00000301475 UGT2A3Q6UWM9 527 aa11.37□□□□□ -0.59
ZNF558-201ENST00000301475 PKD2L1Q9P0L9 805 aa11.37□□□□□ -0.59
ZNF558-201ENST00000301475 NYAP2Q9P242 653 aa11.37□□□□□ -0.59
ZNF558-201ENST00000301475 ZNF510Q9Y2H8 683 aa11.37□□□□□ -0.59
ZNF558-201ENST00000301475 PCDHB2Q9Y5E7 798 aa11.37□□□□□ -0.59
ZNF558-201ENST00000301475 hCG_1818297A0A087WSY0 165 aa11.37□□□□□ -0.59
ZNF558-201ENST00000301475 KLF11O14901 512 aa11.37□□□□□ -0.59
ZNF558-201ENST00000301475 RGL2O15211 777 aa11.37□□□□□ -0.59
ZNF558-201ENST00000301475 HLA-DOAP06340 250 aa11.37□□□□□ -0.59
ZNF558-201ENST00000301475 MAPTP10636 758 aaKnown RBP11.37□□□□□ -0.59
ZNF558-201ENST00000301475 AQP5P55064 265 aa11.37□□□□□ -0.59
ZNF558-201ENST00000301475 PEX3P56589 373 aa11.37□□□□□ -0.59
ZNF558-201ENST00000301475 MCCD1P59942 119 aaPredicted RBP11.37□□□□□ -0.59
ZNF558-201ENST00000301475 HPCAP84074 193 aa11.37□□□□□ -0.59
ZNF558-201ENST00000301475 SLC25A3Q00325 362 aa11.37□□□□□ -0.59
ZNF558-201ENST00000301475 ZNF772Q68DY9 489 aaPredicted RBP11.37□□□□□ -0.59
ZNF558-201ENST00000301475 CDC42EP5Q6NZY7 148 aa11.37□□□□□ -0.59
ZNF558-201ENST00000301475 CCDC174Q6PII3 467 aa11.37□□□□□ -0.59
ZNF558-201ENST00000301475 USP6NLQ92738 828 aa11.37□□□□□ -0.59
ZNF558-201ENST00000301475 RBM17Q96I25 401 aaKnown RBP11.37□□□□□ -0.59
ZNF558-201ENST00000301475 CCDC17Q96LX7 622 aa11.37□□□□□ -0.59
ZNF558-201ENST00000301475 ACAP3Q96P50 834 aa11.37□□□□□ -0.59
ZNF558-201ENST00000301475 SRPK1Q96SB4 655 aaKnown RBP11.37□□□□□ -0.59
ZNF558-201ENST00000301475 EBF4Q9BQW3 602 aa11.37□□□□□ -0.59
ZNF558-201ENST00000301475 C20orf27Q9GZN8 174 aa11.37□□□□□ -0.59
ZNF558-201ENST00000301475 EPB41L1Q9H4G0 881 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms