RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 CILPO75339 1184 aa23.07■■□□□ 1.28
TPM4-201ENST00000300933 CD48P09326 243 aa23.07■■□□□ 1.28
TPM4-201ENST00000300933 CCL14Q16627 93 aa23.07■■□□□ 1.28
TPM4-201ENST00000300933 ANKRD23Q86SG2 305 aa23.07■■□□□ 1.28
TPM4-201ENST00000300933 C18orf25Q96B23 403 aaPredicted RBP23.07■■□□□ 1.28
TPM4-201ENST00000300933 PIWIL1Q96J94 861 aaKnown RBP23.07■■□□□ 1.28
TPM4-201ENST00000300933 ABHD16BQ9H3Z7 469 aa23.07■■□□□ 1.28
TPM4-201ENST00000300933 GAS8O95995 478 aa23.06■■□□□ 1.28
TPM4-201ENST00000300933 GHRP10912 638 aa23.06■■□□□ 1.28
TPM4-201ENST00000300933 ATF2P15336 505 aa23.06■■□□□ 1.28
TPM4-201ENST00000300933 AKAP5P24588 427 aa23.06■■□□□ 1.28
TPM4-201ENST00000300933 YWHAEP62258 255 aaKnown RBP23.06■■□□□ 1.28
TPM4-201ENST00000300933 PLCB3Q01970 1234 aa23.06■■□□□ 1.28
TPM4-201ENST00000300933 KYNUQ16719 465 aa23.06■■□□□ 1.28
TPM4-201ENST00000300933 ZNF365Q70YC5 407 aa23.06■■□□□ 1.28
TPM4-201ENST00000300933 NSMCE1Q8WV22 266 aa23.06■■□□□ 1.28
TPM4-201ENST00000300933 PARP2Q9UGN5 583 aa23.06■■□□□ 1.28
TPM4-201ENST00000300933 ZNF148Q9UQR1 794 aa23.06■■□□□ 1.28
TPM4-201ENST00000300933 SCN1AP35498 2009 aa23.06■■□□□ 1.28
TPM4-201ENST00000300933 CYP3A5P20815 502 aa23.06■■□□□ 1.28
TPM4-201ENST00000300933 HOXA11P31270 313 aaPredicted RBP23.06■■□□□ 1.28
TPM4-201ENST00000300933 IFNAR2P48551 515 aa23.06■■□□□ 1.28
TPM4-201ENST00000300933 RGS7P49802 495 aa23.06■■□□□ 1.28
TPM4-201ENST00000300933 LONRF1Q17RB8 773 aa23.06■■□□□ 1.28
TPM4-201ENST00000300933 LRRC34Q8IZ02 419 aa23.06■■□□□ 1.28
TPM4-201ENST00000300933 SNF8Q96H20 258 aa23.06■■□□□ 1.28
TPM4-201ENST00000300933 CNOT10Q9H9A5 744 aaKnown RBP23.06■■□□□ 1.28
TPM4-201ENST00000300933 ANAPC5Q9UJX4 755 aa23.06■■□□□ 1.28
TPM4-201ENST00000300933 BEX3Q00994 111 aa23.05■■□□□ 1.28
TPM4-201ENST00000300933 SPOCD1Q6ZMY3 1216 aa23.05■■□□□ 1.28
TPM4-201ENST00000300933 P3H4Q92791 437 aa23.05■■□□□ 1.28
TPM4-201ENST00000300933 EMID1Q96A84 441 aaPredicted RBP23.05■■□□□ 1.28
TPM4-201ENST00000300933 TLCD1Q96CP7 247 aa23.05■■□□□ 1.28
TPM4-201ENST00000300933 ZNF317Q96PQ6 595 aaPredicted RBP23.05■■□□□ 1.28
TPM4-201ENST00000300933 TRIM6Q9C030 488 aaPredicted RBP23.05■■□□□ 1.28
TPM4-201ENST00000300933 KLK14Q9P0G3 267 aa23.05■■□□□ 1.28
TPM4-201ENST00000300933 VIMP08670 466 aaKnown RBP23.05■■□□□ 1.28
TPM4-201ENST00000300933 RARGP13631 454 aa23.05■■□□□ 1.28
TPM4-201ENST00000300933 CDC25CP30307 473 aa23.05■■□□□ 1.28
TPM4-201ENST00000300933 MTM1Q13496 603 aa23.05■■□□□ 1.28
TPM4-201ENST00000300933 CCNG2Q16589 344 aa23.05■■□□□ 1.28
TPM4-201ENST00000300933 CATSPER4Q7RTX7 472 aa23.05■■□□□ 1.28
TPM4-201ENST00000300933 C2orf69Q8N8R5 385 aa23.05■■□□□ 1.28
TPM4-201ENST00000300933 GTF3C2Q8WUA4 911 aaPredicted RBP23.05■■□□□ 1.28
TPM4-201ENST00000300933 RSRC1Q96IZ7 334 aaKnown RBP23.05■■□□□ 1.28
TPM4-201ENST00000300933 PRMT1Q99873 361 aaKnown RBP23.05■■□□□ 1.28
TPM4-201ENST00000300933 ADPGKQ9BRR6 497 aa23.05■■□□□ 1.28
TPM4-201ENST00000300933 ZNF518BQ9C0D4 1074 aa23.05■■□□□ 1.28
TPM4-201ENST00000300933 FAM49BQ9NUQ9 324 aa23.05■■□□□ 1.28
TPM4-201ENST00000300933 TUBGCP4Q9UGJ1 667 aa23.05■■□□□ 1.28
TPM4-201ENST00000300933 LRCH4O75427 683 aa23.05■■□□□ 1.28
TPM4-201ENST00000300933 CDH5P33151 784 aaPredicted RBP23.05■■□□□ 1.28
TPM4-201ENST00000300933 PTK6Q13882 451 aa23.05■■□□□ 1.28
TPM4-201ENST00000300933 XYLT1Q86Y38 959 aa23.05■■□□□ 1.28
TPM4-201ENST00000300933 RCOR2Q8IZ40 523 aa23.05■■□□□ 1.28
TPM4-201ENST00000300933 TMEM121Q9BTD3 319 aa23.05■■□□□ 1.28
TPM4-201ENST00000300933 ASB7Q9H672 318 aa23.05■■□□□ 1.28
TPM4-201ENST00000300933 IFNB1P01574 187 aa23.04■■□□□ 1.28
TPM4-201ENST00000300933 P3H1Q32P28 736 aa23.04■■□□□ 1.28
TPM4-201ENST00000300933 OLFML2BQ68BL8 750 aa23.04■■□□□ 1.28
TPM4-201ENST00000300933 MAIP1Q8WWC4 291 aa23.04■■□□□ 1.28
TPM4-201ENST00000300933 SLCO2A1Q92959 643 aa23.04■■□□□ 1.28
TPM4-201ENST00000300933 RUNDC3BQ96NL0 473 aa23.04■■□□□ 1.28
TPM4-201ENST00000300933 PARK7Q99497 189 aaKnown RBP23.04■■□□□ 1.28
TPM4-201ENST00000300933 CTNNAL1Q9UBT7 734 aa23.04■■□□□ 1.28
TPM4-201ENST00000300933 SNX9Q9Y5X1 595 aa23.04■■□□□ 1.28
TPM4-201ENST00000300933 NUDT17P0C025 328 aa23.04■■□□□ 1.28
TPM4-201ENST00000300933 POU5F1BQ06416 359 aa23.04■■□□□ 1.28
TPM4-201ENST00000300933 IFNLR1Q8IU57 520 aaPredicted RBP23.04■■□□□ 1.28
TPM4-201ENST00000300933 DNAJB3Q8WWF6 145 aa23.04■■□□□ 1.28
TPM4-201ENST00000300933 C9orf72Q96LT7 481 aa23.04■■□□□ 1.28
TPM4-201ENST00000300933 NXF3Q9H4D5 531 aaKnown RBP23.04■■□□□ 1.28
TPM4-201ENST00000300933 WHRNQ9P202 907 aa23.04■■□□□ 1.28
TPM4-201ENST00000300933 GJD2Q9UKL4 321 aa23.04■■□□□ 1.28
TPM4-201ENST00000300933 NEU2Q9Y3R4 380 aa23.04■■□□□ 1.28
TPM4-201ENST00000300933 HTTP42858 3142 aa23.03■■□□□ 1.28
TPM4-201ENST00000300933 TRIP12Q14669 1992 aaPredicted RBP23.03■■□□□ 1.28
TPM4-201ENST00000300933 CITO14578 2027 aa23.03■■□□□ 1.28
TPM4-201ENST00000300933 MED7O43513 233 aa23.03■■□□□ 1.28
TPM4-201ENST00000300933 SMIM10L2AP0DMW4 78 aa23.03■■□□□ 1.28
TPM4-201ENST00000300933 SMIM10L2BP0DMW5 78 aa23.03■■□□□ 1.28
TPM4-201ENST00000300933 PIGHQ14442 188 aaPredicted RBP23.03■■□□□ 1.28
TPM4-201ENST00000300933 CDO1Q16878 200 aa23.03■■□□□ 1.28
TPM4-201ENST00000300933 IZUMO3Q5VZ72 239 aa23.03■■□□□ 1.28
TPM4-201ENST00000300933 RHBDF2Q6PJF5 856 aa23.03■■□□□ 1.28
TPM4-201ENST00000300933 TMEM40Q8WWA1 233 aa23.03■■□□□ 1.28
TPM4-201ENST00000300933 HSPH1Q92598 858 aa23.03■■□□□ 1.28
TPM4-201ENST00000300933 LIASO43766 372 aa23.03■■□□□ 1.28
TPM4-201ENST00000300933 ANP32DO95626 131 aa23.03■■□□□ 1.28
TPM4-201ENST00000300933 ITIH2P19823 946 aa23.03■■□□□ 1.28
TPM4-201ENST00000300933 CYP2B6P20813 491 aa23.03■■□□□ 1.28
TPM4-201ENST00000300933 MAN1A1P33908 653 aa23.03■■□□□ 1.28
TPM4-201ENST00000300933 GPD2P43304 727 aa23.03■■□□□ 1.28
TPM4-201ENST00000300933 FAM110CQ1W6H9 321 aa23.03■■□□□ 1.28
TPM4-201ENST00000300933 FAM102AQ5T9C2 384 aaPredicted RBP23.03■■□□□ 1.28
TPM4-201ENST00000300933 CST9Q5W186 159 aa23.03■■□□□ 1.28
TPM4-201ENST00000300933 NAIF1Q69YI7 327 aaPredicted RBP23.03■■□□□ 1.28
TPM4-201ENST00000300933 ZNF467Q7Z7K2 595 aaPredicted RBP23.03■■□□□ 1.28
TPM4-201ENST00000300933 ACOT1Q86TX2 421 aa23.03■■□□□ 1.28
TPM4-201ENST00000300933 SESTD1Q86VW0 696 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms