RNA–Protein interactions for RNA: ENST00000299259.10

COPS2-201, Transcript of COP9 signalosome subunit 2, humanhuman

TSL 1 (best) BASIC

Gene COPS2, Length 2,036 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-201ENST00000299259 ZSCAN5CA6NGD5 496 aaPredicted RBP11.06□□□□□ -0.64
COPS2-201ENST00000299259 PITPNM1O00562 1244 aa11.06□□□□□ -0.64
COPS2-201ENST00000299259 EOMESO95936 686 aa11.06□□□□□ -0.64
COPS2-201ENST00000299259 KRT1P04264 644 aa11.06□□□□□ -0.64
COPS2-201ENST00000299259 MYBL2P10244 700 aa11.06□□□□□ -0.64
COPS2-201ENST00000299259 ODC1P11926 461 aa11.06□□□□□ -0.64
COPS2-201ENST00000299259 ACAT1P24752 427 aaKnown RBP11.06□□□□□ -0.64
COPS2-201ENST00000299259 TKTP29401 623 aaKnown RBP11.06□□□□□ -0.64
COPS2-201ENST00000299259 LHX1P48742 406 aa11.06□□□□□ -0.64
COPS2-201ENST00000299259 OLFML1Q6UWY5 402 aa11.06□□□□□ -0.64
COPS2-201ENST00000299259 MAATS1Q7Z4T9 603 aa11.06□□□□□ -0.64
COPS2-201ENST00000299259 EXD1Q8NHP7 514 aa11.06□□□□□ -0.64
COPS2-201ENST00000299259 HINFPQ9BQA5 517 aa11.06□□□□□ -0.64
COPS2-201ENST00000299259 SLC4A5Q9BY07 1137 aa11.06□□□□□ -0.64
COPS2-201ENST00000299259 PLEKHA4Q9H4M7 779 aa11.06□□□□□ -0.64
COPS2-201ENST00000299259 GDF3Q9NR23 364 aa11.06□□□□□ -0.64
COPS2-201ENST00000299259 PQBP1O60828 265 aaKnown RBP11.06□□□□□ -0.64
COPS2-201ENST00000299259 CAPN15O75808 1086 aa11.06□□□□□ -0.64
COPS2-201ENST00000299259 B3GAT3O94766 335 aa11.06□□□□□ -0.64
COPS2-201ENST00000299259 TCF4P15884 667 aa11.06□□□□□ -0.64
COPS2-201ENST00000299259 GPD1P21695 349 aa11.06□□□□□ -0.64
COPS2-201ENST00000299259 CHRNA3P32297 505 aa11.06□□□□□ -0.64
COPS2-201ENST00000299259 SMC1AQ14683 1233 aaKnown RBP11.06□□□□□ -0.64
COPS2-201ENST00000299259 ZFYVE27Q5T4F4 411 aa11.06□□□□□ -0.64
COPS2-201ENST00000299259 CCNI2Q6ZMN8 369 aaPredicted RBP11.06□□□□□ -0.64
COPS2-201ENST00000299259 POLNQ7Z5Q5 900 aa11.06□□□□□ -0.64
COPS2-201ENST00000299259 TMEM110Q86TL2 294 aa11.06□□□□□ -0.64
COPS2-201ENST00000299259 RTN4RL1Q86UN2 441 aaPredicted RBP11.06□□□□□ -0.64
COPS2-201ENST00000299259 ZDHHC17Q8IUH5 632 aa11.06□□□□□ -0.64
COPS2-201ENST00000299259 PRELID2Q8N945 189 aa11.06□□□□□ -0.64
COPS2-201ENST00000299259 URGCPQ8TCY9 931 aa11.06□□□□□ -0.64
COPS2-201ENST00000299259 MAIP1Q8WWC4 291 aa11.06□□□□□ -0.64
COPS2-201ENST00000299259 RBM41Q96IZ5 413 aaKnown RBP11.06□□□□□ -0.64
COPS2-201ENST00000299259 PIWIL1Q96J94 861 aaKnown RBP11.06□□□□□ -0.64
COPS2-201ENST00000299259 HNRNPABQ99729 332 aaKnown RBP11.06□□□□□ -0.64
COPS2-201ENST00000299259 SYT15Q9BQS2 421 aa11.06□□□□□ -0.64
COPS2-201ENST00000299259 CYLDQ9NQC7 956 aa11.06□□□□□ -0.64
COPS2-201ENST00000299259 KLHL11Q9NVR0 708 aa11.06□□□□□ -0.64
COPS2-201ENST00000299259 FNDC1Q4ZHG4 1894 aaPredicted RBP11.05□□□□□ -0.64
COPS2-201ENST00000299259 TTC3P53804 2025 aa11.05□□□□□ -0.64
COPS2-201ENST00000299259 MYO16Q9Y6X6 1858 aa11.05□□□□□ -0.64
COPS2-201ENST00000299259 TCRBV7S2A1N4TA0A589 114 aa11.05□□□□□ -0.64
COPS2-201ENST00000299259 ESYT3A0FGR9 886 aa11.05□□□□□ -0.64
COPS2-201ENST00000299259 FSCN2O14926 492 aa11.05□□□□□ -0.64
COPS2-201ENST00000299259 TTI1O43156 1089 aa11.05□□□□□ -0.64
COPS2-201ENST00000299259 ATP8B1O43520 1251 aa11.05□□□□□ -0.64
COPS2-201ENST00000299259 NBNO60934 754 aa11.05□□□□□ -0.64
COPS2-201ENST00000299259 ATP2C2O75185 946 aa11.05□□□□□ -0.64
COPS2-201ENST00000299259 LRCH4O75427 683 aa11.05□□□□□ -0.64
COPS2-201ENST00000299259 PTPN1P18031 435 aaKnown RBP11.05□□□□□ -0.64
COPS2-201ENST00000299259 PAX3P23760 479 aa11.05□□□□□ -0.64
COPS2-201ENST00000299259 CETN2P41208 172 aa11.05□□□□□ -0.64
COPS2-201ENST00000299259 PLA2G4AP47712 749 aa11.05□□□□□ -0.64
COPS2-201ENST00000299259 SLC8A3P57103 927 aa11.05□□□□□ -0.64
COPS2-201ENST00000299259 DR1Q01658 176 aa11.05□□□□□ -0.64
COPS2-201ENST00000299259 DHX34Q14147 1143 aaKnown RBP11.05□□□□□ -0.64
COPS2-201ENST00000299259 ACAP1Q15027 740 aa11.05□□□□□ -0.64
COPS2-201ENST00000299259 SIX1Q15475 284 aaPredicted RBP11.05□□□□□ -0.64
COPS2-201ENST00000299259 CYP1B1Q16678 543 aa11.05□□□□□ -0.64
COPS2-201ENST00000299259 CCDC142Q17RM4 750 aa11.05□□□□□ -0.64
COPS2-201ENST00000299259 PAN2Q504Q3 1202 aaKnown RBP11.05□□□□□ -0.64
COPS2-201ENST00000299259 TIGD5Q53EQ6 642 aa11.05□□□□□ -0.64
COPS2-201ENST00000299259 MDH1BQ5I0G3 518 aa11.05□□□□□ -0.64
COPS2-201ENST00000299259 CLLU1OSQ5K130 101 aa11.05□□□□□ -0.64
COPS2-201ENST00000299259 FUKQ8N0W3 1084 aa11.05□□□□□ -0.64
COPS2-201ENST00000299259 C12orf50Q8NA57 414 aaPredicted RBP11.05□□□□□ -0.64
COPS2-201ENST00000299259 SPATA18Q8TC71 538 aa11.05□□□□□ -0.64
COPS2-201ENST00000299259 AENQ8WTP8 325 aaKnown RBP11.05□□□□□ -0.64
COPS2-201ENST00000299259 EPB41L5Q9HCM4 733 aa11.05□□□□□ -0.64
COPS2-201ENST00000299259 DDX56Q9NY93 547 aaKnown RBP11.05□□□□□ -0.64
COPS2-201ENST00000299259 VWA8A3KMH1 1905 aa11.05□□□□□ -0.64
COPS2-201ENST00000299259 C2CD4BA6NLJ0 364 aa11.04□□□□□ -0.64
COPS2-201ENST00000299259 I3L4J1 428 aa11.04□□□□□ -0.64
COPS2-201ENST00000299259 XPO1O14980 1071 aaKnown RBP11.04□□□□□ -0.64
COPS2-201ENST00000299259 PAPSS1O43252 624 aaPredicted RBP11.04□□□□□ -0.64
COPS2-201ENST00000299259 KRT7P08729 469 aa11.04□□□□□ -0.64
COPS2-201ENST00000299259 RARAP10276 462 aa11.04□□□□□ -0.64
COPS2-201ENST00000299259 RALAP11233 206 aa11.04□□□□□ -0.64
COPS2-201ENST00000299259 PCSK1P29120 753 aa11.04□□□□□ -0.64
COPS2-201ENST00000299259 TNNT3P45378 269 aaPredicted RBP11.04□□□□□ -0.64
COPS2-201ENST00000299259 ACADSBP45954 432 aa11.04□□□□□ -0.64
COPS2-201ENST00000299259 ZNF143P52747 638 aaPredicted RBP11.04□□□□□ -0.64
COPS2-201ENST00000299259 EPHB4P54760 987 aa11.04□□□□□ -0.64
COPS2-201ENST00000299259 SLC6A3Q01959 620 aa11.04□□□□□ -0.64
COPS2-201ENST00000299259 SLC25A11Q02978 314 aaKnown RBP11.04□□□□□ -0.64
COPS2-201ENST00000299259 LLGL1Q15334 1064 aa11.04□□□□□ -0.64
COPS2-201ENST00000299259 HADHQ16836 314 aaKnown RBP11.04□□□□□ -0.64
COPS2-201ENST00000299259 PLEKHG4Q58EX7 1191 aa11.04□□□□□ -0.64
COPS2-201ENST00000299259 ODF2Q5BJF6 829 aa11.04□□□□□ -0.64
COPS2-201ENST00000299259 ZDHHC14Q8IZN3 488 aa11.04□□□□□ -0.64
COPS2-201ENST00000299259 HASPINQ8TF76 798 aa11.04□□□□□ -0.64
COPS2-201ENST00000299259 CASKIN2Q8WXE0 1202 aa11.04□□□□□ -0.64
COPS2-201ENST00000299259 MAGOHBQ96A72 148 aaKnown RBP11.04□□□□□ -0.64
COPS2-201ENST00000299259 RUNDC3BQ96NL0 473 aa11.04□□□□□ -0.64
COPS2-201ENST00000299259 CNPY3Q9BT09 278 aa11.04□□□□□ -0.64
COPS2-201ENST00000299259 FUT8Q9BYC5 575 aa11.04□□□□□ -0.64
COPS2-201ENST00000299259 OSBPL8Q9BZF1 889 aa11.04□□□□□ -0.64
COPS2-201ENST00000299259 RAB17Q9H0T7 212 aa11.04□□□□□ -0.64
COPS2-201ENST00000299259 KRT82Q9NSB4 513 aa11.04□□□□□ -0.64
COPS2-201ENST00000299259 TMEM161AQ9NX61 479 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms