RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 C11orf91Q3C1V1 193 aa6.32□□□□□ -1.4
SSX3-201ENST00000298396 SV2CQ496J9 727 aa6.32□□□□□ -1.4
SSX3-201ENST00000298396 VWA3BQ502W6 1294 aa6.32□□□□□ -1.4
SSX3-201ENST00000298396 FAM171A1Q5VUB5 890 aa6.32□□□□□ -1.4
SSX3-201ENST00000298396 PLPP4Q5VZY2 271 aa6.32□□□□□ -1.4
SSX3-201ENST00000298396 WSCD1Q658N2 575 aa6.32□□□□□ -1.4
SSX3-201ENST00000298396 GJB7Q6PEY0 223 aa6.32□□□□□ -1.4
SSX3-201ENST00000298396 SCARA5Q6ZMJ2 495 aa6.32□□□□□ -1.4
SSX3-201ENST00000298396 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.32□□□□□ -1.4
SSX3-201ENST00000298396 FAM114A1Q8IWE2 563 aa6.32□□□□□ -1.4
SSX3-201ENST00000298396 VPS52Q8N1B4 723 aa6.32□□□□□ -1.4
SSX3-201ENST00000298396 FBXL13Q8NEE6 735 aa6.32□□□□□ -1.4
SSX3-201ENST00000298396 VN1R2Q8NFZ6 395 aa6.32□□□□□ -1.4
SSX3-201ENST00000298396 OR10T2Q8NGX3 314 aa6.32□□□□□ -1.4
SSX3-201ENST00000298396 LNX1Q8TBB1 728 aaPredicted RBP6.32□□□□□ -1.4
SSX3-201ENST00000298396 WHAMMQ8TF30 809 aa6.32□□□□□ -1.4
SSX3-201ENST00000298396 PIK3R5Q8WYR1 880 aa6.32□□□□□ -1.4
SSX3-201ENST00000298396 TMEM169Q96HH4 297 aa6.32□□□□□ -1.4
SSX3-201ENST00000298396 ZNF560Q96MR9 790 aa6.32□□□□□ -1.4
SSX3-201ENST00000298396 KREMEN1Q96MU8 473 aa6.32□□□□□ -1.4
SSX3-201ENST00000298396 TWNKQ96RR1 684 aa6.32□□□□□ -1.4
SSX3-201ENST00000298396 CDX2Q99626 313 aaPredicted RBP6.32□□□□□ -1.4
SSX3-201ENST00000298396 PKMYT1Q99640 499 aa6.32□□□□□ -1.4
SSX3-201ENST00000298396 LPIN3Q9BQK8 851 aa6.32□□□□□ -1.4
SSX3-201ENST00000298396 CLSTN3Q9BQT9 956 aa6.32□□□□□ -1.4
SSX3-201ENST00000298396 MRPL45Q9BRJ2 306 aaKnown RBP6.32□□□□□ -1.4
SSX3-201ENST00000298396 TTPALQ9BTX7 342 aa6.32□□□□□ -1.4
SSX3-201ENST00000298396 BCO2Q9BYV7 579 aa6.32□□□□□ -1.4
SSX3-201ENST00000298396 NAT10Q9H0A0 1025 aaKnown RBP6.32□□□□□ -1.4
SSX3-201ENST00000298396 INTS2Q9H0H0 1204 aaKnown RBP6.32□□□□□ -1.4
SSX3-201ENST00000298396 VPS16Q9H269 839 aa6.32□□□□□ -1.4
SSX3-201ENST00000298396 GANQ9H2C0 597 aa6.32□□□□□ -1.4
SSX3-201ENST00000298396 NDST4Q9H3R1 872 aa6.32□□□□□ -1.4
SSX3-201ENST00000298396 TLR9Q9NR96 1032 aa6.32□□□□□ -1.4
SSX3-201ENST00000298396 RAB20Q9NX57 234 aa6.32□□□□□ -1.4
SSX3-201ENST00000298396 MTMR10Q9NXD2 777 aa6.32□□□□□ -1.4
SSX3-201ENST00000298396 HMGXB4Q9UGU5 601 aa6.32□□□□□ -1.4
SSX3-201ENST00000298396 MTCH2Q9Y6C9 303 aa6.32□□□□□ -1.4
SSX3-201ENST00000298396 DNMT3AQ9Y6K1 912 aaPredicted RBP6.32□□□□□ -1.4
SSX3-201ENST00000298396 NUP210Q8TEM1 1887 aaPredicted RBP6.32□□□□□ -1.4
SSX3-201ENST00000298396 MYOFQ9NZM1 2061 aa6.31□□□□□ -1.4
SSX3-201ENST00000298396 KIF26AQ9ULI4 1882 aaPredicted RBP6.31□□□□□ -1.4
SSX3-201ENST00000298396 GTPBP10A4D1E9 387 aaKnown RBP6.31□□□□□ -1.4
SSX3-201ENST00000298396 C2CD2LO14523 706 aa6.31□□□□□ -1.4
SSX3-201ENST00000298396 TERTO14746 1132 aaKnown RBP6.31□□□□□ -1.4
SSX3-201ENST00000298396 GABRDO14764 452 aa6.31□□□□□ -1.4
SSX3-201ENST00000298396 SYN3O14994 580 aa6.31□□□□□ -1.4
SSX3-201ENST00000298396 P4HA2O15460 535 aa6.31□□□□□ -1.4
SSX3-201ENST00000298396 STX10O60499 249 aa6.31□□□□□ -1.4
SSX3-201ENST00000298396 N4BP1O75113 896 aaKnown RBP6.31□□□□□ -1.4
SSX3-201ENST00000298396 PHACTR2O75167 634 aa6.31□□□□□ -1.4
SSX3-201ENST00000298396 OAZ2O95190 189 aa6.31□□□□□ -1.4
SSX3-201ENST00000298396 CAVIN2O95810 425 aa6.31□□□□□ -1.4
SSX3-201ENST00000298396 GLP2RO95838 553 aa6.31□□□□□ -1.4
SSX3-201ENST00000298396 CALCAP01258 141 aa6.31□□□□□ -1.4
SSX3-201ENST00000298396 CNPP09543 421 aaKnown RBP6.31□□□□□ -1.4
SSX3-201ENST00000298396 OR4Q2P0C623 313 aa6.31□□□□□ -1.4
SSX3-201ENST00000298396 TYMPP19971 482 aa6.31□□□□□ -1.4
SSX3-201ENST00000298396 POU3F3P20264 500 aaPredicted RBP6.31□□□□□ -1.4
SSX3-201ENST00000298396 ACO1P21399 889 aaKnown RBP6.31□□□□□ -1.4
SSX3-201ENST00000298396 ACAT1P24752 427 aaKnown RBP6.31□□□□□ -1.4
SSX3-201ENST00000298396 LMO2P25791 158 aa6.31□□□□□ -1.4
SSX3-201ENST00000298396 ATICP31939 592 aa6.31□□□□□ -1.4
SSX3-201ENST00000298396 PNPLA4P41247 253 aa6.31□□□□□ -1.4
SSX3-201ENST00000298396 GLUD2P49448 558 aa6.31□□□□□ -1.4
SSX3-201ENST00000298396 CDR1P51861 262 aa6.31□□□□□ -1.4
SSX3-201ENST00000298396 FANCCQ00597 558 aa6.31□□□□□ -1.4
SSX3-201ENST00000298396 LRMPQ12912 555 aa6.31□□□□□ -1.4
SSX3-201ENST00000298396 ORC1Q13415 861 aa6.31□□□□□ -1.4
SSX3-201ENST00000298396 TRPC3Q13507 836 aa6.31□□□□□ -1.4
SSX3-201ENST00000298396 KCNC3Q14003 757 aa6.31□□□□□ -1.4
SSX3-201ENST00000298396 NR1I3Q14994 352 aa6.31□□□□□ -1.4
SSX3-201ENST00000298396 SGSM1Q2NKQ1 1148 aa6.31□□□□□ -1.4
SSX3-201ENST00000298396 USP41Q3LFD5 358 aa6.31□□□□□ -1.4
SSX3-201ENST00000298396 WDR72Q3MJ13 1102 aa6.31□□□□□ -1.4
SSX3-201ENST00000298396 LCE2AQ5TA79 106 aaPredicted RBP6.31□□□□□ -1.4
SSX3-201ENST00000298396 TRIM65Q6PJ69 517 aa6.31□□□□□ -1.4
SSX3-201ENST00000298396 LRRTM3Q86VH5 581 aa6.31□□□□□ -1.4
SSX3-201ENST00000298396 CREBRFQ8IUR6 639 aa6.31□□□□□ -1.4
SSX3-201ENST00000298396 DEFB123Q8N688 67 aa6.31□□□□□ -1.4
SSX3-201ENST00000298396 TOP6BLQ8N6T0 577 aa6.31□□□□□ -1.4
SSX3-201ENST00000298396 MYLIPQ8WY64 445 aa6.31□□□□□ -1.4
SSX3-201ENST00000298396 RIN2Q8WYP3 895 aaPredicted RBP6.31□□□□□ -1.4
SSX3-201ENST00000298396 MRPL38Q96DV4 380 aaKnown RBP6.31□□□□□ -1.4
SSX3-201ENST00000298396 ERGIC2Q96RQ1 377 aa6.31□□□□□ -1.4
SSX3-201ENST00000298396 GAS2L1Q99501 681 aaPredicted RBP6.31□□□□□ -1.4
SSX3-201ENST00000298396 TCF25Q9BQ70 676 aa6.31□□□□□ -1.4
SSX3-201ENST00000298396 NAA15Q9BXJ9 866 aaKnown RBP6.31□□□□□ -1.4
SSX3-201ENST00000298396 GPR88Q9GZN0 384 aa6.31□□□□□ -1.4
SSX3-201ENST00000298396 NIF3L1Q9GZT8 377 aa6.31□□□□□ -1.4
SSX3-201ENST00000298396 NUCKS1Q9H1E3 243 aaKnown RBP6.31□□□□□ -1.4
SSX3-201ENST00000298396 DPEP3Q9H4B8 488 aa6.31□□□□□ -1.4
SSX3-201ENST00000298396 RUBCNLQ9H714 662 aa6.31□□□□□ -1.4
SSX3-201ENST00000298396 RXFP1Q9HBX9 757 aa6.31□□□□□ -1.4
SSX3-201ENST00000298396 GPAMQ9HCL2 828 aa6.31□□□□□ -1.4
SSX3-201ENST00000298396 TMEM30AQ9NV96 361 aa6.31□□□□□ -1.4
SSX3-201ENST00000298396 TMLHEQ9NVH6 421 aa6.31□□□□□ -1.4
SSX3-201ENST00000298396 GCNT4Q9P109 453 aa6.31□□□□□ -1.4
SSX3-201ENST00000298396 MTRRQ9UBK8 725 aa6.31□□□□□ -1.4
SSX3-201ENST00000298396 FBXL5Q9UKA1 691 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms