RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 NLRP4Q96MN2 994 aa25.58■■□□□ 1.69
SPTSSA-201ENST00000298130 ENTPD5O75356 428 aa25.58■■□□□ 1.69
SPTSSA-201ENST00000298130 GRAP2O75791 330 aa25.58■■□□□ 1.69
SPTSSA-201ENST00000298130 KDELR1P24390 212 aa25.58■■□□□ 1.69
SPTSSA-201ENST00000298130 TCF7P36402 384 aaPredicted RBP25.58■■□□□ 1.69
SPTSSA-201ENST00000298130 ANKRD20A2Q5SQ80 823 aa25.58■■□□□ 1.69
SPTSSA-201ENST00000298130 ANKRD20A1Q5TYW2 823 aa25.58■■□□□ 1.69
SPTSSA-201ENST00000298130 ANKRD20A3Q5VUR7 823 aa25.58■■□□□ 1.69
SPTSSA-201ENST00000298130 TRIM68Q6AZZ1 485 aa25.58■■□□□ 1.69
SPTSSA-201ENST00000298130 WDR49Q8IV35 697 aa25.58■■□□□ 1.69
SPTSSA-201ENST00000298130 ASCC2Q9H1I8 757 aaPredicted RBP25.58■■□□□ 1.69
SPTSSA-201ENST00000298130 FAM155BO75949 473 aa25.57■■□□□ 1.68
SPTSSA-201ENST00000298130 ERBB2P04626 1255 aa25.57■■□□□ 1.68
SPTSSA-201ENST00000298130 ARL4CP56559 192 aa25.57■■□□□ 1.68
SPTSSA-201ENST00000298130 ENPEPQ07075 957 aa25.57■■□□□ 1.68
SPTSSA-201ENST00000298130 EFHC2Q5JST6 749 aa25.57■■□□□ 1.68
SPTSSA-201ENST00000298130 FAXCQ5TGI0 409 aa25.57■■□□□ 1.68
SPTSSA-201ENST00000298130 LRRC38Q5VT99 294 aa25.57■■□□□ 1.68
SPTSSA-201ENST00000298130 PPIL6Q8IXY8 311 aa25.57■■□□□ 1.68
SPTSSA-201ENST00000298130 NAT8LQ8N9F0 302 aa25.57■■□□□ 1.68
SPTSSA-201ENST00000298130 EEF1DP3Q658K8 133 aa25.57■■□□□ 1.68
SPTSSA-201ENST00000298130 SNCAIPQ9Y6H5 919 aa25.57■■□□□ 1.68
SPTSSA-201ENST00000298130 TOM1L1O75674 476 aa25.56■■□□□ 1.68
SPTSSA-201ENST00000298130 CDO1Q16878 200 aa25.56■■□□□ 1.68
SPTSSA-201ENST00000298130 SGSM1Q2NKQ1 1148 aa25.56■■□□□ 1.68
SPTSSA-201ENST00000298130 CATSPERGQ6ZRH7 1159 aa25.56■■□□□ 1.68
SPTSSA-201ENST00000298130 KANSL3Q9P2N6 904 aa25.56■■□□□ 1.68
SPTSSA-201ENST00000298130 ZFP69BQ9UJL9 534 aa25.56■■□□□ 1.68
SPTSSA-201ENST00000298130 FARP2O94887 1054 aaPredicted RBP25.56■■□□□ 1.68
SPTSSA-201ENST00000298130 PRKCBP05771 671 aa25.56■■□□□ 1.68
SPTSSA-201ENST00000298130 ALDH3A1P30838 453 aa25.56■■□□□ 1.68
SPTSSA-201ENST00000298130 EIF3EP60228 445 aaKnown RBP25.56■■□□□ 1.68
SPTSSA-201ENST00000298130 CCDC15Q0P6D6 951 aa25.56■■□□□ 1.68
SPTSSA-201ENST00000298130 ANGEL2Q5VTE6 544 aaKnown RBP25.56■■□□□ 1.68
SPTSSA-201ENST00000298130 CCDC33Q8N5R6 958 aa25.56■■□□□ 1.68
SPTSSA-201ENST00000298130 UBA3Q8TBC4 463 aa25.56■■□□□ 1.68
SPTSSA-201ENST00000298130 ACO2Q99798 780 aaKnown RBP25.56■■□□□ 1.68
SPTSSA-201ENST00000298130 XYLT2Q9H1B5 865 aa25.56■■□□□ 1.68
SPTSSA-201ENST00000298130 DDX56Q9NY93 547 aaKnown RBP25.56■■□□□ 1.68
SPTSSA-201ENST00000298130 ATG7O95352 703 aa25.56■■□□□ 1.68
SPTSSA-201ENST00000298130 HOXC6P09630 235 aa25.56■■□□□ 1.68
SPTSSA-201ENST00000298130 CXCL8P10145 99 aa25.56■■□□□ 1.68
SPTSSA-201ENST00000298130 NEFHP12036 1026 aa25.56■■□□□ 1.68
SPTSSA-201ENST00000298130 ELK3P41970 407 aa25.56■■□□□ 1.68
SPTSSA-201ENST00000298130 LAMTOR4Q0VGL1 99 aa25.56■■□□□ 1.68
SPTSSA-201ENST00000298130 ATP11CQ8NB49 1132 aa25.56■■□□□ 1.68
SPTSSA-201ENST00000298130 TTC17Q96AE7 1141 aa25.56■■□□□ 1.68
SPTSSA-201ENST00000298130 MRPL4Q9BYD3 311 aaKnown RBP25.56■■□□□ 1.68
SPTSSA-201ENST00000298130 SDCBP2Q9H190 292 aa25.56■■□□□ 1.68
SPTSSA-201ENST00000298130 LRMDAQ9H2I8 198 aa25.56■■□□□ 1.68
SPTSSA-201ENST00000298130 FBXO6Q9NRD1 293 aaPredicted RBP25.56■■□□□ 1.68
SPTSSA-201ENST00000298130 INO80B-WBP1J3KQ70 363 aa25.55■■□□□ 1.68
SPTSSA-201ENST00000298130 LSM8O95777 96 aaKnown RBP25.55■■□□□ 1.68
SPTSSA-201ENST00000298130 RBP3P10745 1247 aa25.55■■□□□ 1.68
SPTSSA-201ENST00000298130 MIPP30301 263 aa25.55■■□□□ 1.68
SPTSSA-201ENST00000298130 CEP128Q6ZU80 1094 aa25.55■■□□□ 1.68
SPTSSA-201ENST00000298130 BZW1Q7L1Q6 419 aaKnown RBP25.55■■□□□ 1.68
SPTSSA-201ENST00000298130 INO80BQ9C086 356 aaPredicted RBP25.55■■□□□ 1.68
SPTSSA-201ENST00000298130 SMYD3Q9H7B4 428 aa25.55■■□□□ 1.68
SPTSSA-201ENST00000298130 AS3MTQ9HBK9 375 aa25.55■■□□□ 1.68
SPTSSA-201ENST00000298130 SLC24A2Q9UI40 661 aa25.55■■□□□ 1.68
SPTSSA-201ENST00000298130 CFAP69A5D8W1 941 aa25.55■■□□□ 1.68
SPTSSA-201ENST00000298130 TARBP2Q15633 366 aaKnown RBP25.55■■□□□ 1.68
SPTSSA-201ENST00000298130 RFWD3Q6PCD5 774 aa25.55■■□□□ 1.68
SPTSSA-201ENST00000298130 SPATA18Q8TC71 538 aa25.55■■□□□ 1.68
SPTSSA-201ENST00000298130 CNKSR2Q8WXI2 1034 aa25.55■■□□□ 1.68
SPTSSA-201ENST00000298130 SERAC1Q96JX3 654 aa25.55■■□□□ 1.68
SPTSSA-201ENST00000298130 RAB3IPQ96QF0 476 aaPredicted RBP25.55■■□□□ 1.68
SPTSSA-201ENST00000298130 NIFKQ9BYG3 293 aaKnown RBP25.55■■□□□ 1.68
SPTSSA-201ENST00000298130 ADAMTS5Q9UNA0 930 aa25.55■■□□□ 1.68
SPTSSA-201ENST00000298130 A0A1B0GUA9 196 aa25.54■■□□□ 1.68
SPTSSA-201ENST00000298130 EIF4BP23588 611 aaKnown RBP25.54■■□□□ 1.68
SPTSSA-201ENST00000298130 ERFP50548 548 aa25.54■■□□□ 1.68
SPTSSA-201ENST00000298130 C1orf228Q6PIY5 440 aa25.54■■□□□ 1.68
SPTSSA-201ENST00000298130 DCAKDQ8WVC6 231 aa25.54■■□□□ 1.68
SPTSSA-201ENST00000298130 PIWIL1Q96J94 861 aaKnown RBP25.54■■□□□ 1.68
SPTSSA-201ENST00000298130 FAM111AQ96PZ2 611 aa25.54■■□□□ 1.68
SPTSSA-201ENST00000298130 TRIM56Q9BRZ2 755 aaKnown RBP25.54■■□□□ 1.68
SPTSSA-201ENST00000298130 TMEM134Q9H6X4 195 aa25.54■■□□□ 1.68
SPTSSA-201ENST00000298130 NRBP2Q9NSY0 501 aa25.54■■□□□ 1.68
SPTSSA-201ENST00000298130 SLC5A4Q9NY91 659 aa25.54■■□□□ 1.68
SPTSSA-201ENST00000298130 YWHAGP61981 247 aaKnown RBP eCLIP25.54■■□□□ 1.68
SPTSSA-201ENST00000298130 RPAINQ86UA6 219 aa25.54■■□□□ 1.68
SPTSSA-201ENST00000298130 OGTO15294 1046 aa25.53■■□□□ 1.68
SPTSSA-201ENST00000298130 PEX11AO75192 247 aa25.53■■□□□ 1.68
SPTSSA-201ENST00000298130 DCTN3O75935 186 aa25.53■■□□□ 1.68
SPTSSA-201ENST00000298130 SKIV2L2P42285 1042 aaKnown RBP25.53■■□□□ 1.68
SPTSSA-201ENST00000298130 SESN3P58005 492 aa25.53■■□□□ 1.68
SPTSSA-201ENST00000298130 FAAP100Q0VG06 881 aa25.53■■□□□ 1.68
SPTSSA-201ENST00000298130 C15orf59Q2T9L4 293 aaPredicted RBP25.53■■□□□ 1.68
SPTSSA-201ENST00000298130 HSDL1Q3SXM5 330 aa25.53■■□□□ 1.68
SPTSSA-201ENST00000298130 KBTBD12Q3ZCT8 623 aa25.53■■□□□ 1.68
SPTSSA-201ENST00000298130 ZNF276Q8N554 614 aa25.53■■□□□ 1.68
SPTSSA-201ENST00000298130 CPSF3Q9UKF6 684 aaKnown RBP25.53■■□□□ 1.68
SPTSSA-201ENST00000298130 TREML2Q5T2D2 321 aa25.53■■□□□ 1.68
SPTSSA-201ENST00000298130 ADGRD1Q6QNK2 874 aa25.53■■□□□ 1.68
SPTSSA-201ENST00000298130 MZB1Q8WU39 189 aa25.53■■□□□ 1.68
SPTSSA-201ENST00000298130 CFAP36Q96G28 342 aa25.53■■□□□ 1.68
SPTSSA-201ENST00000298130 NUDCD1Q96RS6 583 aa25.53■■□□□ 1.68
SPTSSA-201ENST00000298130 PEBP4Q96S96 227 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms