RNA–Protein interactions for RNA: ENST00000297439.3

DEFB1-201, Transcript of defensin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEFB1, Length 478 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEFB1-201ENST00000297439 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.94□□□□□ -1.3
DEFB1-201ENST00000297439 SLC45A1Q9Y2W3 748 aa6.94□□□□□ -1.3
DEFB1-201ENST00000297439 USP15Q9Y4E8 981 aaPredicted RBP6.94□□□□□ -1.3
DEFB1-201ENST00000297439 IVNS1ABPQ9Y6Y0 642 aa6.94□□□□□ -1.3
DEFB1-201ENST00000297439 CFAP69A5D8W1 941 aa6.93□□□□□ -1.3
DEFB1-201ENST00000297439 ANKRD65E5RJM6 399 aa6.93□□□□□ -1.3
DEFB1-201ENST00000297439 F8VP50 259 aa6.93□□□□□ -1.3
DEFB1-201ENST00000297439 CHUKO15111 745 aa6.93□□□□□ -1.3
DEFB1-201ENST00000297439 MGRN1O60291 552 aa6.93□□□□□ -1.3
DEFB1-201ENST00000297439 ZNF189O75820 626 aaPredicted RBP6.93□□□□□ -1.3
DEFB1-201ENST00000297439 ARIH2O95376 493 aa6.93□□□□□ -1.3
DEFB1-201ENST00000297439 ASMTLO95671 621 aa6.93□□□□□ -1.3
DEFB1-201ENST00000297439 CALCAP01258 141 aa6.93□□□□□ -1.3
DEFB1-201ENST00000297439 IL1BP01584 269 aa6.93□□□□□ -1.3
DEFB1-201ENST00000297439 KRT3P12035 628 aa6.93□□□□□ -1.3
DEFB1-201ENST00000297439 BRD2P25440 801 aaKnown RBP6.93□□□□□ -1.3
DEFB1-201ENST00000297439 GCAP28676 217 aa6.93□□□□□ -1.3
DEFB1-201ENST00000297439 STIP1P31948 543 aaKnown RBP6.93□□□□□ -1.3
DEFB1-201ENST00000297439 PHBP35232 272 aa6.93□□□□□ -1.3
DEFB1-201ENST00000297439 MAGEA6P43360 314 aa6.93□□□□□ -1.3
DEFB1-201ENST00000297439 ARSEP51690 589 aa6.93□□□□□ -1.3
DEFB1-201ENST00000297439 CDC42EP1Q00587 391 aa6.93□□□□□ -1.3
DEFB1-201ENST00000297439 IL9RQ01113 521 aa6.93□□□□□ -1.3
DEFB1-201ENST00000297439 PTPN11Q06124 597 aaPredicted RBP6.93□□□□□ -1.3
DEFB1-201ENST00000297439 MOGSQ13724 837 aa6.93□□□□□ -1.3
DEFB1-201ENST00000297439 LAMC2Q13753 1193 aa6.93□□□□□ -1.3
DEFB1-201ENST00000297439 TTLL4Q14679 1199 aa6.93□□□□□ -1.3
DEFB1-201ENST00000297439 MTFR1Q15390 333 aa6.93□□□□□ -1.3
DEFB1-201ENST00000297439 LONRF1Q17RB8 773 aa6.93□□□□□ -1.3
DEFB1-201ENST00000297439 FAM47CQ5HY64 1035 aa6.93□□□□□ -1.3
DEFB1-201ENST00000297439 UBAP2Q5T6F2 1119 aaKnown RBP6.93□□□□□ -1.3
DEFB1-201ENST00000297439 RNF187Q5TA31 235 aaPredicted RBP6.93□□□□□ -1.3
DEFB1-201ENST00000297439 LLGL2Q6P1M3 1020 aa6.93□□□□□ -1.3
DEFB1-201ENST00000297439 ILDR2Q71H61 639 aa6.93□□□□□ -1.3
DEFB1-201ENST00000297439 ARCQ7LC44 396 aa6.93□□□□□ -1.3
DEFB1-201ENST00000297439 GSTA5Q7RTV2 222 aa6.93□□□□□ -1.3
DEFB1-201ENST00000297439 TRMT1LQ7Z2T5 733 aaKnown RBP6.93□□□□□ -1.3
DEFB1-201ENST00000297439 ZNF410Q86VK4 478 aa6.93□□□□□ -1.3
DEFB1-201ENST00000297439 NCAPG2Q86XI2 1143 aa6.93□□□□□ -1.3
DEFB1-201ENST00000297439 XYLT1Q86Y38 959 aa6.93□□□□□ -1.3
DEFB1-201ENST00000297439 SULF1Q8IWU6 871 aa6.93□□□□□ -1.3
DEFB1-201ENST00000297439 PPIL6Q8IXY8 311 aa6.93□□□□□ -1.3
DEFB1-201ENST00000297439 FUKQ8N0W3 1084 aa6.93□□□□□ -1.3
DEFB1-201ENST00000297439 NAT8LQ8N9F0 302 aa6.93□□□□□ -1.3
DEFB1-201ENST00000297439 C1orf127Q8N9H9 656 aa6.93□□□□□ -1.3
DEFB1-201ENST00000297439 ATP11CQ8NB49 1132 aa6.93□□□□□ -1.3
DEFB1-201ENST00000297439 STK32AQ8WU08 396 aa6.93□□□□□ -1.3
DEFB1-201ENST00000297439 TEKT4Q8WW24 435 aa6.93□□□□□ -1.3
DEFB1-201ENST00000297439 PRCCQ92733 491 aaPredicted RBP6.93□□□□□ -1.3
DEFB1-201ENST00000297439 APBB2Q92870 758 aa6.93□□□□□ -1.3
DEFB1-201ENST00000297439 RTP4Q96DX8 246 aa6.93□□□□□ -1.3
DEFB1-201ENST00000297439 TMEM176AQ96HP8 235 aa6.93□□□□□ -1.3
DEFB1-201ENST00000297439 TBCBQ99426 244 aa6.93□□□□□ -1.3
DEFB1-201ENST00000297439 PRMT1Q99873 361 aaKnown RBP6.93□□□□□ -1.3
DEFB1-201ENST00000297439 CNPY3Q9BT09 278 aa6.93□□□□□ -1.3
DEFB1-201ENST00000297439 TCHPQ9BT92 498 aa6.93□□□□□ -1.3
DEFB1-201ENST00000297439 HEMGNQ9BXL5 484 aa6.93□□□□□ -1.3
DEFB1-201ENST00000297439 PRKD2Q9BZL6 878 aa6.93□□□□□ -1.3
DEFB1-201ENST00000297439 RABEP2Q9H5N1 569 aa6.93□□□□□ -1.3
DEFB1-201ENST00000297439 RSAD1Q9HA92 442 aa6.93□□□□□ -1.3
DEFB1-201ENST00000297439 PLEKHA5Q9HAU0 1116 aa6.93□□□□□ -1.3
DEFB1-201ENST00000297439 CYLDQ9NQC7 956 aa6.93□□□□□ -1.3
DEFB1-201ENST00000297439 NKIRAS1Q9NYS0 192 aa6.93□□□□□ -1.3
DEFB1-201ENST00000297439 RBPJLQ9UBG7 517 aa6.93□□□□□ -1.3
DEFB1-201ENST00000297439 GTF2IRD1Q9UHL9 959 aa6.93□□□□□ -1.3
DEFB1-201ENST00000297439 NAALADL1Q9UQQ1 740 aa6.93□□□□□ -1.3
DEFB1-201ENST00000297439 ZNF148Q9UQR1 794 aa6.93□□□□□ -1.3
DEFB1-201ENST00000297439 ARL2BPQ9Y2Y0 163 aa6.93□□□□□ -1.3
DEFB1-201ENST00000297439 STARD13Q9Y3M8 1113 aa6.93□□□□□ -1.3
DEFB1-201ENST00000297439 ANK1P16157 1881 aa6.93□□□□□ -1.3
DEFB1-201ENST00000297439 PLXNA1Q9UIW2 1896 aa6.92□□□□□ -1.3
DEFB1-201ENST00000297439 EXOC1LA0A1B0GW35 172 aa6.92□□□□□ -1.3
DEFB1-201ENST00000297439 LRRD1A4D1F6 860 aa6.92□□□□□ -1.3
DEFB1-201ENST00000297439 LCE2BO14633 110 aa6.92□□□□□ -1.3
DEFB1-201ENST00000297439 RNF8O76064 485 aa6.92□□□□□ -1.3
DEFB1-201ENST00000297439 VIMP08670 466 aaKnown RBP6.92□□□□□ -1.3
DEFB1-201ENST00000297439 GSTA2P09210 222 aa6.92□□□□□ -1.3
DEFB1-201ENST00000297439 PECAM1P16284 738 aaPredicted RBP6.92□□□□□ -1.3
DEFB1-201ENST00000297439 OSBPP22059 807 aa6.92□□□□□ -1.3
DEFB1-201ENST00000297439 KDELR1P24390 212 aa6.92□□□□□ -1.3
DEFB1-201ENST00000297439 PSMA2P25787 234 aa6.92□□□□□ -1.3
DEFB1-201ENST00000297439 NF2P35240 595 aa6.92□□□□□ -1.3
DEFB1-201ENST00000297439 RFC1P35251 1148 aaPredicted RBP6.92□□□□□ -1.3
DEFB1-201ENST00000297439 GPD2P43304 727 aa6.92□□□□□ -1.3
DEFB1-201ENST00000297439 SLCO1A2P46721 670 aa6.92□□□□□ -1.3
DEFB1-201ENST00000297439 ZNF143P52747 638 aaPredicted RBP6.92□□□□□ -1.3
DEFB1-201ENST00000297439 ARL4CP56559 192 aa6.92□□□□□ -1.3
DEFB1-201ENST00000297439 SNX16P57768 344 aa6.92□□□□□ -1.3
DEFB1-201ENST00000297439 PSMC1P62191 440 aaKnown RBP6.92□□□□□ -1.3
DEFB1-201ENST00000297439 TFAMQ00059 246 aaKnown RBP6.92□□□□□ -1.3
DEFB1-201ENST00000297439 ARHGAP1Q07960 439 aa6.92□□□□□ -1.3
DEFB1-201ENST00000297439 MYO1EQ12965 1108 aa6.92□□□□□ -1.3
DEFB1-201ENST00000297439 GPS1Q13098 491 aa6.92□□□□□ -1.3
DEFB1-201ENST00000297439 TFDP2Q14188 446 aa6.92□□□□□ -1.3
DEFB1-201ENST00000297439 PDK2Q15119 407 aa6.92□□□□□ -1.3
DEFB1-201ENST00000297439 PDK4Q16654 411 aa6.92□□□□□ -1.3
DEFB1-201ENST00000297439 HIF1AQ16665 826 aa6.92□□□□□ -1.3
DEFB1-201ENST00000297439 LY6KQ17RY6 165 aa6.92□□□□□ -1.3
DEFB1-201ENST00000297439 KLHL38Q2WGJ6 581 aa6.92□□□□□ -1.3
DEFB1-201ENST00000297439 C2CD6Q53TS8 623 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms