RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 FAM84AQ96KN4 292 aa16.04■□□□□ 0.16
FNDC1-201ENST00000297267 SEMA6AQ9H2E6 1030 aa16.04■□□□□ 0.16
FNDC1-201ENST00000297267 TKFCQ3LXA3 575 aa16.04■□□□□ 0.16
FNDC1-201ENST00000297267 FAM131BQ86XD5 332 aa16.04■□□□□ 0.16
FNDC1-201ENST00000297267 ZNF560Q96MR9 790 aa16.04■□□□□ 0.16
FNDC1-201ENST00000297267 ATP11BQ9Y2G3 1177 aa16.04■□□□□ 0.16
FNDC1-201ENST00000297267 CYP2C9P11712 490 aa16.04■□□□□ 0.16
FNDC1-201ENST00000297267 ADSLP30566 484 aaPredicted RBP16.04■□□□□ 0.16
FNDC1-201ENST00000297267 OTUD4Q01804 1114 aaKnown RBP16.04■□□□□ 0.16
FNDC1-201ENST00000297267 TRIM25Q14258 630 aaKnown RBP16.04■□□□□ 0.16
FNDC1-201ENST00000297267 CLEC16AQ2KHT3 1053 aa16.04■□□□□ 0.16
FNDC1-201ENST00000297267 EXD1Q8NHP7 514 aa16.04■□□□□ 0.16
FNDC1-201ENST00000297267 DEFB129Q9H1M3 183 aa16.04■□□□□ 0.16
FNDC1-201ENST00000297267 DDIT4Q9NX09 232 aa16.04■□□□□ 0.16
FNDC1-201ENST00000297267 UTP6Q9NYH9 597 aaKnown RBP16.04■□□□□ 0.16
FNDC1-201ENST00000297267 SPASTQ9UBP0 616 aa16.04■□□□□ 0.16
FNDC1-201ENST00000297267 TUBE1Q9UJT0 475 aa16.04■□□□□ 0.16
FNDC1-201ENST00000297267 PCDHGB4Q9UN71 923 aa16.04■□□□□ 0.16
FNDC1-201ENST00000297267 ZSCAN5DPP0CG00 497 aa16.03■□□□□ 0.16
FNDC1-201ENST00000297267 ACO1P21399 889 aaKnown RBP16.03■□□□□ 0.16
FNDC1-201ENST00000297267 XKR3Q5GH77 459 aa16.03■□□□□ 0.16
FNDC1-201ENST00000297267 ASAP3Q8TDY4 903 aa16.03■□□□□ 0.16
FNDC1-201ENST00000297267 NSL1Q96IY1 281 aa16.03■□□□□ 0.16
FNDC1-201ENST00000297267 TMEM120AQ9BXJ8 343 aa16.03■□□□□ 0.16
FNDC1-201ENST00000297267 ARMCX1Q9P291 453 aa16.03■□□□□ 0.16
FNDC1-201ENST00000297267 SUPT7LO94864 414 aa16.03■□□□□ 0.16
FNDC1-201ENST00000297267 SKOR1P84550 965 aa16.03■□□□□ 0.16
FNDC1-201ENST00000297267 DEFB128Q7Z7B8 93 aa16.03■□□□□ 0.16
FNDC1-201ENST00000297267 MED21Q13503 144 aa16.03■□□□□ 0.16
FNDC1-201ENST00000297267 NPNTQ6UXI9 565 aa16.03■□□□□ 0.16
FNDC1-201ENST00000297267 IMPDH2P12268 514 aa16.03■□□□□ 0.16
FNDC1-201ENST00000297267 INPP5AQ14642 412 aa16.03■□□□□ 0.16
FNDC1-201ENST00000297267 PTPAQ15257 358 aa16.03■□□□□ 0.16
FNDC1-201ENST00000297267 SMARCAD1Q9H4L7 1026 aa16.03■□□□□ 0.16
FNDC1-201ENST00000297267 DNAJC16Q9Y2G8 782 aa16.03■□□□□ 0.16
FNDC1-201ENST00000297267 ZC3H13Q5T200 1668 aaKnown RBP16.03■□□□□ 0.16
FNDC1-201ENST00000297267 DDX3XO00571 662 aaKnown RBP eCLIP16.03■□□□□ 0.16
FNDC1-201ENST00000297267 ZC3H11AO75152 810 aaKnown RBP eCLIP16.03■□□□□ 0.16
FNDC1-201ENST00000297267 POLBP06746 335 aa16.03■□□□□ 0.16
FNDC1-201ENST00000297267 GIT2Q14161 759 aa16.03■□□□□ 0.16
FNDC1-201ENST00000297267 ZNF614Q8N883 585 aa16.03■□□□□ 0.16
FNDC1-201ENST00000297267 THUMPD3Q9BV44 507 aaKnown RBP16.03■□□□□ 0.16
FNDC1-201ENST00000297267 SENP6Q9GZR1 1112 aaPredicted RBP16.03■□□□□ 0.16
FNDC1-201ENST00000297267 ANKZF1Q9H8Y5 726 aa16.03■□□□□ 0.16
FNDC1-201ENST00000297267 ZC4H2Q9NQZ6 224 aa16.03■□□□□ 0.16
FNDC1-201ENST00000297267 SNTG2Q9NY99 539 aa16.03■□□□□ 0.16
FNDC1-201ENST00000297267 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.03■□□□□ 0.16
FNDC1-201ENST00000297267 CDV3Q9UKY7 258 aaKnown RBP16.03■□□□□ 0.16
FNDC1-201ENST00000297267 SH3BP1Q9Y3L3 701 aa16.03■□□□□ 0.16
FNDC1-201ENST00000297267 DDTLA6NHG4 134 aaPredicted RBP16.03■□□□□ 0.16
FNDC1-201ENST00000297267 GH1P01241 217 aa16.03■□□□□ 0.16
FNDC1-201ENST00000297267 CCDC130P13994 396 aa16.03■□□□□ 0.16
FNDC1-201ENST00000297267 C16orf59Q7L2K0 433 aa16.03■□□□□ 0.16
FNDC1-201ENST00000297267 FAM172AQ8WUF8 416 aa16.03■□□□□ 0.16
FNDC1-201ENST00000297267 NUDT12Q9BQG2 462 aa16.03■□□□□ 0.16
FNDC1-201ENST00000297267 FICDQ9BVA6 458 aa16.03■□□□□ 0.16
FNDC1-201ENST00000297267 DGAT1O75907 488 aa16.02■□□□□ 0.16
FNDC1-201ENST00000297267 CXCL8P10145 99 aa16.02■□□□□ 0.16
FNDC1-201ENST00000297267 GARTP22102 1010 aa16.02■□□□□ 0.16
FNDC1-201ENST00000297267 MYL6P60660 151 aa16.02■□□□□ 0.16
FNDC1-201ENST00000297267 TSGA10IPQ3SY00 556 aa16.02■□□□□ 0.16
FNDC1-201ENST00000297267 ENGASEQ8NFI3 743 aa16.02■□□□□ 0.16
FNDC1-201ENST00000297267 PWWP2AQ96N64 755 aa16.02■□□□□ 0.16
FNDC1-201ENST00000297267 CXorf56Q9H5V9 222 aa16.02■□□□□ 0.16
FNDC1-201ENST00000297267 TECPR2O15040 1411 aa16.02■□□□□ 0.16
FNDC1-201ENST00000297267 PFASO15067 1338 aa16.02■□□□□ 0.16
FNDC1-201ENST00000297267 TRAPPC11Q7Z392 1133 aa16.02■□□□□ 0.16
FNDC1-201ENST00000297267 PPIL6Q8IXY8 311 aa16.02■□□□□ 0.16
FNDC1-201ENST00000297267 ZNRF3Q9ULT6 936 aa16.02■□□□□ 0.16
FNDC1-201ENST00000297267 FARP1Q9Y4F1 1045 aaPredicted RBP16.02■□□□□ 0.16
FNDC1-201ENST00000297267 CCL15-CCL14A0A0B4J2E2 113 aa16.02■□□□□ 0.15
FNDC1-201ENST00000297267 WDR27A2RRH5 827 aa16.02■□□□□ 0.15
FNDC1-201ENST00000297267 PTGER2P43116 358 aa16.02■□□□□ 0.15
FNDC1-201ENST00000297267 RAP1GDS1P52306 607 aa16.02■□□□□ 0.15
FNDC1-201ENST00000297267 TAP1Q03518 808 aa16.02■□□□□ 0.15
FNDC1-201ENST00000297267 CCL15Q16663 113 aa16.02■□□□□ 0.15
FNDC1-201ENST00000297267 TRIM65Q6PJ69 517 aa16.02■□□□□ 0.15
FNDC1-201ENST00000297267 NYAP1Q6ZVC0 841 aa16.02■□□□□ 0.15
FNDC1-201ENST00000297267 CINPQ9BW66 212 aaPredicted RBP16.02■□□□□ 0.15
FNDC1-201ENST00000297267 TRIM54Q9BYV2 358 aa16.02■□□□□ 0.15
FNDC1-201ENST00000297267 ABCG8Q9H221 673 aa16.02■□□□□ 0.15
FNDC1-201ENST00000297267 VCPKMTQ9H867 229 aa16.02■□□□□ 0.15
FNDC1-201ENST00000297267 PKD2L2Q9NZM6 624 aa16.02■□□□□ 0.15
FNDC1-201ENST00000297267 SCTRP47872 440 aa16.02■□□□□ 0.15
FNDC1-201ENST00000297267 AQP5P55064 265 aa16.02■□□□□ 0.15
FNDC1-201ENST00000297267 VEPH1Q14D04 833 aa16.02■□□□□ 0.15
FNDC1-201ENST00000297267 INTS5Q6P9B9 1019 aaKnown RBP16.02■□□□□ 0.15
FNDC1-201ENST00000297267 ENOSF1Q7L5Y1 443 aa16.02■□□□□ 0.15
FNDC1-201ENST00000297267 SEPT1Q8WYJ6 367 aa16.02■□□□□ 0.15
FNDC1-201ENST00000297267 MTBPQ96DY7 904 aa16.02■□□□□ 0.15
FNDC1-201ENST00000297267 ZBTB45Q96K62 511 aaPredicted RBP16.02■□□□□ 0.15
FNDC1-201ENST00000297267 ITSN1Q15811 1721 aa16.02■□□□□ 0.15
FNDC1-201ENST00000297267 AP1G2O75843 785 aa16.02■□□□□ 0.15
FNDC1-201ENST00000297267 RRM1P23921 792 aa16.02■□□□□ 0.15
FNDC1-201ENST00000297267 POU1F1P28069 291 aa16.02■□□□□ 0.15
FNDC1-201ENST00000297267 GTF2H3Q13889 308 aa16.02■□□□□ 0.15
FNDC1-201ENST00000297267 CSHL1Q14406 222 aa16.02■□□□□ 0.15
FNDC1-201ENST00000297267 TTC23LQ6PF05 361 aa16.02■□□□□ 0.15
FNDC1-201ENST00000297267 LRIG3Q6UXM1 1119 aa16.02■□□□□ 0.15
FNDC1-201ENST00000297267 SNX13Q9Y5W8 968 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms