RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 ADGRG6Q86SQ4 1221 aa20.08■□□□□ 0.8
TRA2A-201ENST00000297071 ANKMY2Q8IV38 441 aa20.08■□□□□ 0.8
TRA2A-201ENST00000297071 CCDC110Q8TBZ0 833 aa20.08■□□□□ 0.8
TRA2A-201ENST00000297071 NRG4Q8WWG1 115 aa20.08■□□□□ 0.8
TRA2A-201ENST00000297071 OXNAD1Q96HP4 312 aaPredicted RBP20.08■□□□□ 0.8
TRA2A-201ENST00000297071 PDCD2LQ9BRP1 358 aa20.08■□□□□ 0.8
TRA2A-201ENST00000297071 TMEM121Q9BTD3 319 aa20.08■□□□□ 0.8
TRA2A-201ENST00000297071 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.08■□□□□ 0.8
TRA2A-201ENST00000297071 DCTN4Q9UJW0 460 aa20.08■□□□□ 0.8
TRA2A-201ENST00000297071 PPME1Q9Y570 386 aa20.08■□□□□ 0.8
TRA2A-201ENST00000297071 TBX10O75333 385 aa20.07■□□□□ 0.8
TRA2A-201ENST00000297071 SERPINB3P29508 390 aa20.07■□□□□ 0.8
TRA2A-201ENST00000297071 TUBP50607 506 aa20.07■□□□□ 0.8
TRA2A-201ENST00000297071 ZBTB16Q05516 673 aa20.07■□□□□ 0.8
TRA2A-201ENST00000297071 DBN1Q16643 649 aa20.07■□□□□ 0.8
TRA2A-201ENST00000297071 TRMT5Q32P41 509 aaKnown RBP20.07■□□□□ 0.8
TRA2A-201ENST00000297071 STYK1Q6J9G0 422 aa20.07■□□□□ 0.8
TRA2A-201ENST00000297071 PASD1Q8IV76 773 aa20.07■□□□□ 0.8
TRA2A-201ENST00000297071 FBXO36Q8NEA4 188 aa20.07■□□□□ 0.8
TRA2A-201ENST00000297071 LPAR1Q92633 364 aa20.07■□□□□ 0.8
TRA2A-201ENST00000297071 ZNF184Q99676 751 aaPredicted RBP20.07■□□□□ 0.8
TRA2A-201ENST00000297071 XPNPEP1Q9NQW7 623 aa20.07■□□□□ 0.8
TRA2A-201ENST00000297071 DLGAP2Q9P1A6 1054 aa20.07■□□□□ 0.8
TRA2A-201ENST00000297071 CPSF2Q9P2I0 782 aaKnown RBP20.07■□□□□ 0.8
TRA2A-201ENST00000297071 SLC17A7Q9P2U7 560 aa20.07■□□□□ 0.8
TRA2A-201ENST00000297071 ZNF180Q9UJW8 692 aa20.07■□□□□ 0.8
TRA2A-201ENST00000297071 A0A0G2JND7 137 aa20.06■□□□□ 0.8
TRA2A-201ENST00000297071 ATP9AO75110 1047 aa20.06■□□□□ 0.8
TRA2A-201ENST00000297071 CSDE1O75534 798 aaKnown RBP20.06■□□□□ 0.8
TRA2A-201ENST00000297071 KRT36O76013 467 aa20.06■□□□□ 0.8
TRA2A-201ENST00000297071 RPL22P35268 128 aaKnown RBP20.06■□□□□ 0.8
TRA2A-201ENST00000297071 RCN2Q14257 317 aa20.06■□□□□ 0.8
TRA2A-201ENST00000297071 RINLQ6ZS11 566 aa20.06■□□□□ 0.8
TRA2A-201ENST00000297071 RHPN2Q8IUC4 686 aa20.06■□□□□ 0.8
TRA2A-201ENST00000297071 PTPRN2Q92932 1015 aa20.06■□□□□ 0.8
TRA2A-201ENST00000297071 TAAR1Q96RJ0 339 aa20.06■□□□□ 0.8
TRA2A-201ENST00000297071 WDR83Q9BRX9 315 aaKnown RBP20.06■□□□□ 0.8
TRA2A-201ENST00000297071 C1orf21Q9H246 121 aa20.06■□□□□ 0.8
TRA2A-201ENST00000297071 PXMP2Q9NR77 195 aa20.06■□□□□ 0.8
TRA2A-201ENST00000297071 SORCS3Q9UPU3 1222 aa20.06■□□□□ 0.8
TRA2A-201ENST00000297071 EP400Q96L91 3159 aa20.06■□□□□ 0.8
TRA2A-201ENST00000297071 CAPN14A8MX76 684 aa20.06■□□□□ 0.8
TRA2A-201ENST00000297071 WEE2P0C1S8 567 aa20.06■□□□□ 0.8
TRA2A-201ENST00000297071 OGDHQ02218 1023 aa20.06■□□□□ 0.8
TRA2A-201ENST00000297071 DNAL1Q4LDG9 190 aa20.06■□□□□ 0.8
TRA2A-201ENST00000297071 MSS51Q4VC12 460 aa20.06■□□□□ 0.8
TRA2A-201ENST00000297071 FAM182BQ5T319 152 aa20.06■□□□□ 0.8
TRA2A-201ENST00000297071 ZFYVE27Q5T4F4 411 aa20.06■□□□□ 0.8
TRA2A-201ENST00000297071 SPOPLQ6IQ16 392 aa20.06■□□□□ 0.8
TRA2A-201ENST00000297071 DCUN1D2Q6PH85 259 aa20.06■□□□□ 0.8
TRA2A-201ENST00000297071 SH2D3AQ9BRG2 576 aa20.06■□□□□ 0.8
TRA2A-201ENST00000297071 SLC38A10Q9HBR0 1119 aa20.06■□□□□ 0.8
TRA2A-201ENST00000297071 KLHL11Q9NVR0 708 aa20.06■□□□□ 0.8
TRA2A-201ENST00000297071 IL1RAPL1Q9NZN1 696 aa20.06■□□□□ 0.8
TRA2A-201ENST00000297071 CNTNAP1P78357 1384 aa20.06■□□□□ 0.8
TRA2A-201ENST00000297071 SSC5DA1L4H1 1573 aa20.05■□□□□ 0.8
TRA2A-201ENST00000297071 SPDYE2BA6NHP3 402 aa20.05■□□□□ 0.8
TRA2A-201ENST00000297071 F8VP50 259 aa20.05■□□□□ 0.8
TRA2A-201ENST00000297071 FCHO1O14526 889 aa20.05■□□□□ 0.8
TRA2A-201ENST00000297071 PSAPP07602 524 aa20.05■□□□□ 0.8
TRA2A-201ENST00000297071 ASNSP08243 561 aa20.05■□□□□ 0.8
TRA2A-201ENST00000297071 SPDYE6P0CI01 402 aa20.05■□□□□ 0.8
TRA2A-201ENST00000297071 TCF4P15884 667 aa20.05■□□□□ 0.8
TRA2A-201ENST00000297071 RAB27AP51159 221 aa20.05■□□□□ 0.8
TRA2A-201ENST00000297071 INHBEP58166 350 aa20.05■□□□□ 0.8
TRA2A-201ENST00000297071 C1QTNF8P60827 252 aa20.05■□□□□ 0.8
TRA2A-201ENST00000297071 ZNF200P98182 395 aaPredicted RBP20.05■□□□□ 0.8
TRA2A-201ENST00000297071 OTUD4Q01804 1114 aaKnown RBP20.05■□□□□ 0.8
TRA2A-201ENST00000297071 PLCB3Q01970 1234 aa20.05■□□□□ 0.8
TRA2A-201ENST00000297071 ACAP1Q15027 740 aa20.05■□□□□ 0.8
TRA2A-201ENST00000297071 HADHQ16836 314 aaKnown RBP20.05■□□□□ 0.8
TRA2A-201ENST00000297071 SPDYE2Q495Y8 402 aa20.05■□□□□ 0.8
TRA2A-201ENST00000297071 THEMIS2Q5TEJ8 643 aa20.05■□□□□ 0.8
TRA2A-201ENST00000297071 C6orf163Q5TEZ5 329 aa20.05■□□□□ 0.8
TRA2A-201ENST00000297071 ANKRD22Q5VYY1 191 aa20.05■□□□□ 0.8
TRA2A-201ENST00000297071 LRRC6Q86X45 466 aa20.05■□□□□ 0.8
TRA2A-201ENST00000297071 ACTL9Q8TC94 416 aa20.05■□□□□ 0.8
TRA2A-201ENST00000297071 RSAD2Q8WXG1 361 aa20.05■□□□□ 0.8
TRA2A-201ENST00000297071 MCEEQ96PE7 176 aa20.05■□□□□ 0.8
TRA2A-201ENST00000297071 GINM1Q9NU53 330 aa20.05■□□□□ 0.8
TRA2A-201ENST00000297071 ETAA1Q9NY74 926 aa20.05■□□□□ 0.8
TRA2A-201ENST00000297071 C2CD2Q9Y426 696 aa20.05■□□□□ 0.8
TRA2A-201ENST00000297071 NUB1Q9Y5A7 615 aa20.05■□□□□ 0.8
TRA2A-201ENST00000297071 CNTNAP2Q9UHC6 1331 aa20.05■□□□□ 0.8
TRA2A-201ENST00000297071 SCN4AP35499 1836 aa20.05■□□□□ 0.8
TRA2A-201ENST00000297071 ZNF862O60290 1169 aa20.04■□□□□ 0.8
TRA2A-201ENST00000297071 PGM1P36871 562 aa20.04■□□□□ 0.8
TRA2A-201ENST00000297071 NLRP11P59045 1033 aaKnown RBP20.04■□□□□ 0.8
TRA2A-201ENST00000297071 SLC25A11Q02978 314 aaKnown RBP20.04■□□□□ 0.8
TRA2A-201ENST00000297071 PTK7Q13308 1070 aa20.04■□□□□ 0.8
TRA2A-201ENST00000297071 EFTUD2Q15029 972 aaKnown RBP eCLIP20.04■□□□□ 0.81e-10■■■■□ 23.4
TRA2A-201ENST00000297071 HP1BP3Q5SSJ5 553 aaPredicted RBP20.04■□□□□ 0.8
TRA2A-201ENST00000297071 ATG16L1Q676U5 607 aa20.04■□□□□ 0.8
TRA2A-201ENST00000297071 KYAT3Q6YP21 454 aaKnown RBP20.04■□□□□ 0.8
TRA2A-201ENST00000297071 ELMO3Q96BJ8 720 aa20.04■□□□□ 0.8
TRA2A-201ENST00000297071 ZBTB10Q96DT7 871 aa20.04■□□□□ 0.8
TRA2A-201ENST00000297071 SIKE1Q9BRV8 207 aa20.04■□□□□ 0.8
TRA2A-201ENST00000297071 MAF1Q9H063 256 aa20.04■□□□□ 0.8
TRA2A-201ENST00000297071 ARHGEF4Q9NR80 690 aa20.04■□□□□ 0.8
TRA2A-201ENST00000297071 RBAKQ9NYW8 714 aaPredicted RBP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms